RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 SPCS1Q9Y6A9 102 aa0.61□□□□□ -2.31
UBR1-205ENST00000564540 PAPPA2Q9BXP8 1791 aa0.6□□□□□ -2.31
UBR1-205ENST00000564540 IQCF6A8MYZ5 107 aa0.6□□□□□ -2.31
UBR1-205ENST00000564540 SNRPFP62306 86 aaKnown RBP0.6□□□□□ -2.31
UBR1-205ENST00000564540 C6orf201Q7Z4U5 140 aa0.6□□□□□ -2.31
UBR1-205ENST00000564540 TP53AIP1Q9HCN2 124 aa0.6□□□□□ -2.31
UBR1-205ENST00000564540 DNAJC13O75165 2243 aa0.6□□□□□ -2.31
UBR1-205ENST00000564540 SHPRHQ149N8 1683 aa0.59□□□□□ -2.31
UBR1-205ENST00000564540 TULP4Q9NRJ4 1543 aa0.59□□□□□ -2.31
UBR1-205ENST00000564540 XRN1Q8IZH2 1706 aaKnown RBP0.59□□□□□ -2.31
UBR1-205ENST00000564540 A0A1B0GU69 56 aa0.59□□□□□ -2.31
UBR1-205ENST00000564540 GNGT1P63211 74 aa0.59□□□□□ -2.31
UBR1-205ENST00000564540 PRO0255Q9UI72 69 aa0.59□□□□□ -2.31
UBR1-205ENST00000564540 UBE2D4Q9Y2X8 147 aa0.59□□□□□ -2.31
UBR1-205ENST00000564540 TARBP1Q13395 1621 aaKnown RBP0.59□□□□□ -2.32
UBR1-205ENST00000564540 KIF14Q15058 1648 aa0.59□□□□□ -2.32
UBR1-205ENST00000564540 CUX1P39880 1505 aa0.59□□□□□ -2.32
UBR1-205ENST00000564540 FRAS1Q86XX4 4008 aa0.58□□□□□ -2.32
UBR1-205ENST00000564540 TRBV7-4A0A0J9YYF1 115 aa0.58□□□□□ -2.32
UBR1-205ENST00000564540 IGLC2P0DOY2 106 aa0.58□□□□□ -2.32
UBR1-205ENST00000564540 IGLC3P0DOY3 106 aa0.58□□□□□ -2.32
UBR1-205ENST00000564540 LINC00643Q86TS7 51 aa0.58□□□□□ -2.32
UBR1-205ENST00000564540 S100A13Q99584 98 aa0.58□□□□□ -2.32
UBR1-205ENST00000564540 MAGI2Q86UL8 1455 aa0.58□□□□□ -2.32
UBR1-205ENST00000564540 FAM208BQ5VWN6 2430 aa0.57□□□□□ -2.32
UBR1-205ENST00000564540 PAPPAQ13219 1627 aa0.57□□□□□ -2.32
UBR1-205ENST00000564540 ERVK-7P63135 1459 aa0.57□□□□□ -2.32
UBR1-205ENST00000564540 MYMXA0A1B0GTQ4 84 aa0.57□□□□□ -2.32
UBR1-205ENST00000564540 KRTAP2-3P0C7H8 128 aa0.57□□□□□ -2.32
UBR1-205ENST00000564540 KRTAP2-4Q9BYR9 128 aa0.57□□□□□ -2.32
UBR1-205ENST00000564540 KRTAP2-1Q9BYU5 128 aa0.57□□□□□ -2.32
UBR1-205ENST00000564540 ST20Q9HBF5 79 aa0.57□□□□□ -2.32
UBR1-205ENST00000564540 CRYBG1Q9Y4K1 1723 aa0.57□□□□□ -2.32
UBR1-205ENST00000564540 C5P01031 1676 aa0.56□□□□□ -2.32
UBR1-205ENST00000564540 SLIT1O75093 1534 aa0.56□□□□□ -2.32
UBR1-205ENST00000564540 ACYP1P07311 99 aa0.56□□□□□ -2.32
UBR1-205ENST00000564540 Q8IZM0 81 aa0.56□□□□□ -2.32
UBR1-205ENST00000564540 DEFB123Q8N688 67 aa0.56□□□□□ -2.32
UBR1-205ENST00000564540 SAMD9Q5K651 1589 aa0.56□□□□□ -2.32
UBR1-205ENST00000564540 MAP3K4Q9Y6R4 1608 aa0.56□□□□□ -2.32
UBR1-205ENST00000564540 A0A0G2JMZ2 1700 aa0.55□□□□□ -2.32
UBR1-205ENST00000564540 CACNA1HO95180 2353 aa0.55□□□□□ -2.32
UBR1-205ENST00000564540 DIP2BQ9P265 1576 aa0.55□□□□□ -2.32
UBR1-205ENST00000564540 KANTRA0A1W2PQU2 76 aa0.55□□□□□ -2.32
UBR1-205ENST00000564540 PLGLAQ15195 96 aa0.55□□□□□ -2.32
UBR1-205ENST00000564540 ADIRFQ15847 76 aa0.55□□□□□ -2.32
UBR1-205ENST00000564540 PIGYQ3MUY2 71 aa0.55□□□□□ -2.32
UBR1-205ENST00000564540 TMEM131LA2VDJ0 1609 aa0.55□□□□□ -2.32
UBR1-205ENST00000564540 AHCTF1Q8WYP5 2266 aa0.54□□□□□ -2.32
UBR1-205ENST00000564540 PRH1P02810 166 aa0.54□□□□□ -2.32
UBR1-205ENST00000564540 SUPT6HQ7KZ85 1726 aaKnown RBP0.54□□□□□ -2.32
UBR1-205ENST00000564540 ANKRD36A6QL64 1941 aa0.54□□□□□ -2.32
UBR1-205ENST00000564540 TTC28Q96AY4 2481 aa0.54□□□□□ -2.32
UBR1-205ENST00000564540 KDM5DQ9BY66 1539 aa0.54□□□□□ -2.32
UBR1-205ENST00000564540 BIVM-ERCC5R4GMW8 1640 aa0.53□□□□□ -2.32
UBR1-205ENST00000564540 APCP25054 2843 aa0.53□□□□□ -2.32
UBR1-205ENST00000564540 FXYD6-FXYD2A0A087WZ82 144 aa0.53□□□□□ -2.32
UBR1-205ENST00000564540 CEBPZOSA8MTT3 80 aa0.53□□□□□ -2.32
UBR1-205ENST00000564540 K7EQZ3 153 aa0.53□□□□□ -2.32
UBR1-205ENST00000564540 SPINK6Q6UWN8 80 aa0.53□□□□□ -2.32
UBR1-205ENST00000564540 ATP7BP35670 1465 aa0.53□□□□□ -2.33
UBR1-205ENST00000564540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.53□□□□□ -2.33
UBR1-205ENST00000564540 SETBP1Q9Y6X0 1596 aa0.53□□□□□ -2.33
UBR1-205ENST00000564540 ANKRD17O75179 2603 aaKnown RBP0.52□□□□□ -2.33
UBR1-205ENST00000564540 A0A1B0GUT8 65 aa0.52□□□□□ -2.33
UBR1-205ENST00000564540 H3BUT2 72 aa0.52□□□□□ -2.33
UBR1-205ENST00000564540 BVES-AS1Q5T3Y7 98 aa0.52□□□□□ -2.33
UBR1-205ENST00000564540 CRIPTQ9P021 101 aa0.52□□□□□ -2.33
UBR1-205ENST00000564540 DCAF1Q9Y4B6 1507 aa0.52□□□□□ -2.33
UBR1-205ENST00000564540 ALKQ9UM73 1620 aa0.52□□□□□ -2.33
UBR1-205ENST00000564540 GOLGA4Q13439 2230 aaKnown RBP0.51□□□□□ -2.33
UBR1-205ENST00000564540 DEFB112Q30KQ8 113 aa0.51□□□□□ -2.33
UBR1-205ENST00000564540 SMR3AQ99954 134 aa0.51□□□□□ -2.33
UBR1-205ENST00000564540 ANK2Q01484 3957 aa0.5□□□□□ -2.33
UBR1-205ENST00000564540 RGPD1P0DJD0 1748 aa0.5□□□□□ -2.33
UBR1-205ENST00000564540 KIAA0556O60303 1618 aa0.5□□□□□ -2.33
UBR1-205ENST00000564540 CELSR2Q9HCU4 2923 aa0.5□□□□□ -2.33
UBR1-205ENST00000564540 BDP1A6H8Y1 2624 aa0.5□□□□□ -2.33
UBR1-205ENST00000564540 TNCP24821 2201 aa0.5□□□□□ -2.33
UBR1-205ENST00000564540 POLQO75417 2590 aa0.5□□□□□ -2.33
UBR1-205ENST00000564540 LRRC9Q6ZRR7 1453 aa0.49□□□□□ -2.33
UBR1-205ENST00000564540 RRBP1Q9P2E9 1410 aaKnown RBP0.49□□□□□ -2.33
UBR1-205ENST00000564540 COX6B1P14854 86 aa0.49□□□□□ -2.33
UBR1-205ENST00000564540 DEFB121Q5J5C9 76 aa0.49□□□□□ -2.33
UBR1-205ENST00000564540 PLCE1Q9P212 2302 aa0.49□□□□□ -2.33
UBR1-205ENST00000564540 PKD1L3Q7Z443 1732 aa0.49□□□□□ -2.33
UBR1-205ENST00000564540 USP24Q9UPU5 2620 aa0.49□□□□□ -2.33
UBR1-205ENST00000564540 RGPD2P0DJD1 1756 aa0.48□□□□□ -2.33
UBR1-205ENST00000564540 LRRC37AA6NMS7 1700 aa0.48□□□□□ -2.33
UBR1-205ENST00000564540 TRAV21A0A0B4J279 112 aa0.48□□□□□ -2.33
UBR1-205ENST00000564540 SPRR1AP35321 89 aa0.48□□□□□ -2.33
UBR1-205ENST00000564540 Q5VSD8 79 aa0.48□□□□□ -2.33
UBR1-205ENST00000564540 USMG5Q96IX5 58 aa0.48□□□□□ -2.33
UBR1-205ENST00000564540 USF3Q68DE3 2245 aa0.48□□□□□ -2.33
UBR1-205ENST00000564540 ABCA12Q86UK0 2595 aa0.48□□□□□ -2.33
UBR1-205ENST00000564540 AHNAKQ09666 5890 aaKnown RBP0.47□□□□□ -2.33
UBR1-205ENST00000564540 FMN2Q9NZ56 1722 aa0.47□□□□□ -2.33
UBR1-205ENST00000564540 ZNF831Q5JPB2 1677 aa0.47□□□□□ -2.33
UBR1-205ENST00000564540 SPRR1BP22528 89 aa0.47□□□□□ -2.33
UBR1-205ENST00000564540 Q5BKY6 102 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms