RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 SCO1O75880 301 aa10.98□□□□□ -0.65
NME3-204ENST00000563498 LINC00173Q6ZV60 143 aa10.98□□□□□ -0.65
NME3-204ENST00000563498 ATP5L2Q7Z4Y8 100 aa10.98□□□□□ -0.65
NME3-204ENST00000563498 AMELXQ99217 191 aa10.98□□□□□ -0.65
NME3-204ENST00000563498 XAGE1AQ9HD64 81 aa10.98□□□□□ -0.65
NME3-204ENST00000563498 TOMM7Q9P0U1 55 aa10.98□□□□□ -0.65
NME3-204ENST00000563498 BCE1O60756 84 aa10.97□□□□□ -0.65
NME3-204ENST00000563498 NPSP0C0P6 89 aa10.97□□□□□ -0.65
NME3-204ENST00000563498 FAM19A3Q7Z5A8 133 aa10.97□□□□□ -0.65
NME3-204ENST00000563498 MRPL55Q7Z7F7 128 aaKnown RBP10.97□□□□□ -0.65
NME3-204ENST00000563498 TYMSOSQ8TAI1 123 aa10.97□□□□□ -0.65
NME3-204ENST00000563498 CYSLTR1Q9Y271 337 aa10.97□□□□□ -0.65
NME3-204ENST00000563498 LAMTOR2Q9Y2Q5 125 aa10.97□□□□□ -0.65
NME3-204ENST00000563498 FAT4Q6V0I7 4981 aa10.96□□□□□ -0.65
NME3-204ENST00000563498 ALKBH7Q9BT30 221 aaPredicted RBP10.96□□□□□ -0.65
NME3-204ENST00000563498 VCX2Q9H322 139 aa10.96□□□□□ -0.65
NME3-204ENST00000563498 S100A6P06703 90 aa10.95□□□□□ -0.66
NME3-204ENST00000563498 C2orf66Q6UXQ4 117 aa10.95□□□□□ -0.66
NME3-204ENST00000563498 F8VRH5 84 aa10.94□□□□□ -0.66
NME3-204ENST00000563498 PEA15Q15121 130 aa10.94□□□□□ -0.66
NME3-204ENST00000563498 ZC2HC1BQ5TFG8 222 aa10.94□□□□□ -0.66
NME3-204ENST00000563498 MAP1LC3AQ9H492 121 aa10.94□□□□□ -0.66
NME3-204ENST00000563498 LOC389332A0A1B0GUA5 103 aa10.93□□□□□ -0.66
NME3-204ENST00000563498 SEC11AP67812 179 aa10.93□□□□□ -0.66
NME3-204ENST00000563498 Q8N8P6 123 aa10.93□□□□□ -0.66
NME3-204ENST00000563498 IGIPA6NJ69 53 aa10.92□□□□□ -0.66
NME3-204ENST00000563498 K7EMI3 77 aa10.92□□□□□ -0.66
NME3-204ENST00000563498 HERVK_113P63121 156 aa10.92□□□□□ -0.66
NME3-204ENST00000563498 SRSF3P84103 164 aaKnown RBP10.92□□□□□ -0.66
NME3-204ENST00000563498 ORMDL2Q53FV1 153 aa10.92□□□□□ -0.66
NME3-204ENST00000563498 CXCL5P42830 114 aa10.91□□□□□ -0.66
NME3-204ENST00000563498 LINC00167Q96N53 147 aa10.9□□□□□ -0.66
NME3-204ENST00000563498 CDKN2A-AS1Q9UH64 79 aa10.9□□□□□ -0.66
NME3-204ENST00000563498 SNAPINO95295 136 aa10.89□□□□□ -0.67
NME3-204ENST00000563498 PAPPA-AS1Q5QFB9 102 aa10.89□□□□□ -0.67
NME3-204ENST00000563498 FAM229BQ4G0N7 80 aa10.88□□□□□ -0.67
NME3-204ENST00000563498 KRTAP13-2Q52LG2 175 aa10.88□□□□□ -0.67
NME3-204ENST00000563498 KRTAP13-1Q8IUC0 172 aa10.88□□□□□ -0.67
NME3-204ENST00000563498 GEMIN7Q9H840 131 aaKnown RBP10.88□□□□□ -0.67
NME3-204ENST00000563498 RPL37AP8A6NKH3 93 aa10.87□□□□□ -0.67
NME3-204ENST00000563498 PCP4L1A6NKN8 68 aa10.87□□□□□ -0.67
NME3-204ENST00000563498 TPRXLQ17RH7 258 aa10.87□□□□□ -0.67
NME3-204ENST00000563498 ANAPC11Q9NYG5 84 aa10.87□□□□□ -0.67
NME3-204ENST00000563498 IGLV5-37A0A075B6J1 123 aa10.85□□□□□ -0.67
NME3-204ENST00000563498 KRTAP9-6A0A140TA67 174 aa10.85□□□□□ -0.67
NME3-204ENST00000563498 G0S2P27469 103 aa10.85□□□□□ -0.67
NME3-204ENST00000563498 LINC00304Q8N9R0 145 aa10.85□□□□□ -0.67
NME3-204ENST00000563498 TIMM17AQ99595 171 aa10.85□□□□□ -0.67
NME3-204ENST00000563498 RETNLBQ9BQ08 111 aa10.85□□□□□ -0.67
NME3-204ENST00000563498 C12orf57Q99622 126 aa10.84□□□□□ -0.67
NME3-204ENST00000563498 CDIP1Q9H305 208 aa10.84□□□□□ -0.67
NME3-204ENST00000563498 NXT2Q9NPJ8 142 aaKnown RBP10.84□□□□□ -0.67
NME3-204ENST00000563498 MUC17Q685J3 4493 aa10.83□□□□□ -0.68
NME3-204ENST00000563498 GAGE10A6NGK3 116 aa10.83□□□□□ -0.68
NME3-204ENST00000563498 SMIM1B2RUZ4 78 aa10.83□□□□□ -0.68
NME3-204ENST00000563498 UBE2AP49459 152 aa10.83□□□□□ -0.68
NME3-204ENST00000563498 PDZD11Q5EBL8 140 aa10.82□□□□□ -0.68
NME3-204ENST00000563498 PNRC1Q12796 327 aaPredicted RBP10.81□□□□□ -0.68
NME3-204ENST00000563498 NKAPP1Q8N9T2 125 aa10.81□□□□□ -0.68
NME3-204ENST00000563498 COX7B2Q8TF08 81 aa10.81□□□□□ -0.68
NME3-204ENST00000563498 TOMM6Q96B49 74 aa10.81□□□□□ -0.68
NME3-204ENST00000563498 IGLV7-46A0A075B6I9 117 aa10.8□□□□□ -0.68
NME3-204ENST00000563498 IGLV5-45A0A087WSX0 123 aa10.79□□□□□ -0.68
NME3-204ENST00000563498 IGKV2D-26A0A0A0MRZ7 120 aa10.79□□□□□ -0.68
NME3-204ENST00000563498 TINCRA0A1B0GVN0 87 aa10.79□□□□□ -0.68
NME3-204ENST00000563498 UQCC3Q6UW78 93 aa10.79□□□□□ -0.68
NME3-204ENST00000563498 ERASQ7Z444 233 aa10.79□□□□□ -0.68
NME3-204ENST00000563498 SMIM6P0DI80 62 aa10.78□□□□□ -0.68
NME3-204ENST00000563498 ANAPC16Q96DE5 110 aa10.78□□□□□ -0.68
NME3-204ENST00000563498 MT-ND4LP03901 98 aa10.76□□□□□ -0.69
NME3-204ENST00000563498 RAB5BP61020 215 aa10.76□□□□□ -0.69
NME3-204ENST00000563498 IGKV2-28A0A075B6P5 120 aa10.75□□□□□ -0.69
NME3-204ENST00000563498 IGKV2D-28P01615 120 aa10.75□□□□□ -0.69
NME3-204ENST00000563498 AKR1D1P51857 326 aa10.75□□□□□ -0.69
NME3-204ENST00000563498 SCGB3A1Q96QR1 104 aa10.75□□□□□ -0.69
NME3-204ENST00000563498 APOC3P02656 99 aa10.74□□□□□ -0.69
NME3-204ENST00000563498 S100PP25815 95 aa10.74□□□□□ -0.69
NME3-204ENST00000563498 LINC01549A6NIU2 74 aa10.73□□□□□ -0.69
NME3-204ENST00000563498 PRLHP81277 87 aa10.73□□□□□ -0.69
NME3-204ENST00000563498 ATP5LO75964 103 aa10.72□□□□□ -0.69
NME3-204ENST00000563498 ADCYAP1P18509 176 aa10.72□□□□□ -0.69
NME3-204ENST00000563498 PPDPFQ9H3Y8 114 aa10.72□□□□□ -0.69
NME3-204ENST00000563498 CST9LQ9H4G1 147 aa10.72□□□□□ -0.69
NME3-204ENST00000563498 SPINK8P0C7L1 97 aa10.71□□□□□ -0.69
NME3-204ENST00000563498 FAM19A1Q7Z5A9 133 aa10.71□□□□□ -0.69
NME3-204ENST00000563498 SVBPQ8N300 66 aa10.71□□□□□ -0.69
NME3-204ENST00000563498 TMEM126AQ9H061 195 aa10.71□□□□□ -0.69
NME3-204ENST00000563498 MRPL18Q9H0U6 180 aaKnown RBP10.71□□□□□ -0.69
NME3-204ENST00000563498 C10orf91Q5T1B1 145 aa10.7□□□□□ -0.7
NME3-204ENST00000563498 LINC00587B1AMM8 73 aa10.69□□□□□ -0.7
NME3-204ENST00000563498 VPREB1P12018 145 aa10.69□□□□□ -0.7
NME3-204ENST00000563498 SPAG11AQ6PDA7 123 aa10.69□□□□□ -0.7
NME3-204ENST00000563498 PLEKHB2Q96CS7 222 aa10.69□□□□□ -0.7
NME3-204ENST00000563498 TMEM238C9JI98 176 aa10.68□□□□□ -0.7
NME3-204ENST00000563498 H3BRM9 83 aa10.68□□□□□ -0.7
NME3-204ENST00000563498 PMVKQ15126 192 aa10.68□□□□□ -0.7
NME3-204ENST00000563498 GNB1LQ9BYB4 327 aa10.68□□□□□ -0.7
NME3-204ENST00000563498 LINC01546A6NGU7 62 aa10.67□□□□□ -0.7
NME3-204ENST00000563498 M0R378 163 aa10.67□□□□□ -0.7
NME3-204ENST00000563498 PFN2P35080 140 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms