RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 Q8IZM0 81 aa6.73□□□□□ -1.33
SMG1-208ENST00000563448 C15orf56Q8N910 161 aa6.73□□□□□ -1.33
SMG1-208ENST00000563448 BVES-AS1Q5T3Y7 98 aa6.72□□□□□ -1.33
SMG1-208ENST00000563448 C2orf91Q6ZV80 131 aa6.72□□□□□ -1.33
SMG1-208ENST00000563448 TM2D2Q9BX73 214 aa6.72□□□□□ -1.33
SMG1-208ENST00000563448 NDUFA12Q9UI09 145 aa6.72□□□□□ -1.33
SMG1-208ENST00000563448 TAX1BP3O14907 124 aa6.72□□□□□ -1.33
SMG1-208ENST00000563448 NDUFA1O15239 70 aa6.72□□□□□ -1.33
SMG1-208ENST00000563448 SPAG11BQ08648 103 aa6.72□□□□□ -1.33
SMG1-208ENST00000563448 GTF2H5Q6ZYL4 71 aa6.72□□□□□ -1.33
SMG1-208ENST00000563448 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
SMG1-208ENST00000563448 PRSS2P07478 247 aa6.71□□□□□ -1.33
SMG1-208ENST00000563448 RNF151Q2KHN1 245 aa6.71□□□□□ -1.33
SMG1-208ENST00000563448 C6orf226Q5I0X4 101 aa6.71□□□□□ -1.33
SMG1-208ENST00000563448 Q6ZRN7 208 aaPredicted RBP6.71□□□□□ -1.33
SMG1-208ENST00000563448 C6orf223Q8N319 242 aa6.71□□□□□ -1.33
SMG1-208ENST00000563448 LINC00526Q96FQ7 95 aa6.71□□□□□ -1.33
SMG1-208ENST00000563448 DNAH10Q8IVF4 4471 aa6.71□□□□□ -1.34
SMG1-208ENST00000563448 A0A0J9YXY3 114 aa6.71□□□□□ -1.34
SMG1-208ENST00000563448 HIGD2BQ4VC39 106 aa6.71□□□□□ -1.34
SMG1-208ENST00000563448 CFAP161Q6P656 301 aa6.7□□□□□ -1.34
SMG1-208ENST00000563448 C2orf82Q6UX34 121 aa6.7□□□□□ -1.34
SMG1-208ENST00000563448 A6NDN8 102 aa6.69□□□□□ -1.34
SMG1-208ENST00000563448 USP17L23D6RBM5 183 aa6.69□□□□□ -1.34
SMG1-208ENST00000563448 PSCAO43653 123 aa6.69□□□□□ -1.34
SMG1-208ENST00000563448 WFDC2Q14508 124 aa6.69□□□□□ -1.34
SMG1-208ENST00000563448 SCGB1D4Q6XE38 83 aa6.69□□□□□ -1.34
SMG1-208ENST00000563448 NTN5Q8WTR8 489 aaPredicted RBP6.69□□□□□ -1.34
SMG1-208ENST00000563448 GVQW2A0A096LPI5 108 aaPredicted RBP6.69□□□□□ -1.34
SMG1-208ENST00000563448 LECT2O14960 151 aa6.69□□□□□ -1.34
SMG1-208ENST00000563448 HIGD1BQ9P298 99 aa6.69□□□□□ -1.34
SMG1-208ENST00000563448 HYDINQ4G0P3 5121 aa6.69□□□□□ -1.34
SMG1-208ENST00000563448 TMEM238LA0A1B0GVL6 79 aa6.68□□□□□ -1.34
SMG1-208ENST00000563448 ZNF561-AS1K7EIQ3 104 aa6.68□□□□□ -1.34
SMG1-208ENST00000563448 CXCL5P42830 114 aa6.68□□□□□ -1.34
SMG1-208ENST00000563448 CKS1BP61024 79 aa6.68□□□□□ -1.34
SMG1-208ENST00000563448 HERV-K104P63124 156 aa6.68□□□□□ -1.34
SMG1-208ENST00000563448 C10orf25Q5T742 122 aa6.68□□□□□ -1.34
SMG1-208ENST00000563448 TMEM238C9JI98 176 aa6.67□□□□□ -1.34
SMG1-208ENST00000563448 UNQ6190/PRO20217Q6UXQ8 127 aa6.67□□□□□ -1.34
SMG1-208ENST00000563448 LITAFQ99732 161 aa6.67□□□□□ -1.34
SMG1-208ENST00000563448 GAGE10A6NGK3 116 aa6.67□□□□□ -1.34
SMG1-208ENST00000563448 C2orf48Q96LS8 159 aa6.67□□□□□ -1.34
SMG1-208ENST00000563448 LRCOL1A6NCL2 159 aa6.66□□□□□ -1.34
SMG1-208ENST00000563448 ADAMTSL4-AS1Q5T5F5 129 aa6.66□□□□□ -1.34
SMG1-208ENST00000563448 SFTA2Q6UW10 78 aa6.66□□□□□ -1.34
SMG1-208ENST00000563448 SMIM13P0DJ93 91 aa6.66□□□□□ -1.34
SMG1-208ENST00000563448 SCGB1A1P11684 91 aa6.66□□□□□ -1.34
SMG1-208ENST00000563448 MEIG1Q5JSS6 88 aa6.66□□□□□ -1.34
SMG1-208ENST00000563448 C1orf134Q5TEV5 83 aa6.66□□□□□ -1.34
SMG1-208ENST00000563448 CAMK2N2Q96S95 79 aa6.66□□□□□ -1.34
SMG1-208ENST00000563448 A0A0U1RRA0 63 aa6.65□□□□□ -1.35
SMG1-208ENST00000563448 LCE6AA0A183 80 aa6.65□□□□□ -1.35
SMG1-208ENST00000563448 C9orf118A6NHY6 69 aa6.65□□□□□ -1.35
SMG1-208ENST00000563448 TIMM17BO60830 172 aa6.65□□□□□ -1.35
SMG1-208ENST00000563448 SLPIP03973 132 aa6.65□□□□□ -1.35
SMG1-208ENST00000563448 C9orf116Q5BN46 136 aaPredicted RBP6.65□□□□□ -1.35
SMG1-208ENST00000563448 Q6ZRU5 148 aa6.65□□□□□ -1.35
SMG1-208ENST00000563448 Q6ZVH6 145 aa6.65□□□□□ -1.35
SMG1-208ENST00000563448 SPANXB1Q9NS25 103 aaPredicted RBP6.65□□□□□ -1.35
SMG1-208ENST00000563448 C6orf48Q9UBA6 75 aa6.65□□□□□ -1.35
SMG1-208ENST00000563448 ERG28Q9UKR5 140 aa6.65□□□□□ -1.35
SMG1-208ENST00000563448 F8WDY8 70 aa6.64□□□□□ -1.35
SMG1-208ENST00000563448 PFN2P35080 140 aa6.64□□□□□ -1.35
SMG1-208ENST00000563448 HSD52Q0P140 79 aa6.64□□□□□ -1.35
SMG1-208ENST00000563448 DAND5Q8N907 189 aa6.64□□□□□ -1.35
SMG1-208ENST00000563448 DNAH2Q9P225 4427 aa6.63□□□□□ -1.35
SMG1-208ENST00000563448 TRBV30A0A0K0K1B3 111 aa6.63□□□□□ -1.35
SMG1-208ENST00000563448 K7EP34 96 aa6.63□□□□□ -1.35
SMG1-208ENST00000563448 SYCNQ0VAF6 134 aa6.63□□□□□ -1.35
SMG1-208ENST00000563448 CIRBPQ14011 172 aaKnown RBP6.63□□□□□ -1.35
SMG1-208ENST00000563448 TAL2Q16559 108 aa6.63□□□□□ -1.35
SMG1-208ENST00000563448 HIST1H4GQ99525 98 aa6.63□□□□□ -1.35
SMG1-208ENST00000563448 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
SMG1-208ENST00000563448 SPANXCQ9NY87 97 aa6.63□□□□□ -1.35
SMG1-208ENST00000563448 FRAS1Q86XX4 4008 aa6.63□□□□□ -1.35
SMG1-208ENST00000563448 LINC00158P58513 81 aa6.62□□□□□ -1.35
SMG1-208ENST00000563448 SRSF9Q13242 221 aaKnown RBP eCLIP6.62□□□□□ -1.35
SMG1-208ENST00000563448 A0A087WTM6 91 aa6.62□□□□□ -1.35
SMG1-208ENST00000563448 COX17Q14061 63 aa6.62□□□□□ -1.35
SMG1-208ENST00000563448 C14orf177Q52M58 125 aa6.62□□□□□ -1.35
SMG1-208ENST00000563448 CARD19Q96LW7 228 aa6.62□□□□□ -1.35
SMG1-208ENST00000563448 SACSQ9NZJ4 4579 aa6.61□□□□□ -1.35
SMG1-208ENST00000563448 NPC2P61916 151 aa6.61□□□□□ -1.35
SMG1-208ENST00000563448 MUSTN1Q8IVN3 82 aa6.61□□□□□ -1.35
SMG1-208ENST00000563448 CEND1Q8N111 149 aa6.61□□□□□ -1.35
SMG1-208ENST00000563448 MIR7-3HGQ8N6C7 128 aa6.61□□□□□ -1.35
SMG1-208ENST00000563448 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.6□□□□□ -1.35
SMG1-208ENST00000563448 J3QR89 54 aa6.6□□□□□ -1.35
SMG1-208ENST00000563448 RTL8CO15255 209 aa6.6□□□□□ -1.35
SMG1-208ENST00000563448 EIF4EBP3O60516 100 aaPredicted RBP6.6□□□□□ -1.35
SMG1-208ENST00000563448 GCSHP23434 173 aa6.6□□□□□ -1.35
SMG1-208ENST00000563448 CNBPP62633 177 aaKnown RBP6.6□□□□□ -1.35
SMG1-208ENST00000563448 SOSTDC1Q6X4U4 206 aa6.6□□□□□ -1.35
SMG1-208ENST00000563448 Q8N814 137 aa6.6□□□□□ -1.35
SMG1-208ENST00000563448 LINC00308Q8TCZ7 52 aa6.6□□□□□ -1.35
SMG1-208ENST00000563448 FABP2P12104 132 aa6.59□□□□□ -1.35
SMG1-208ENST00000563448 FXYD2P54710 66 aa6.59□□□□□ -1.35
SMG1-208ENST00000563448 TNP2Q05952 138 aa6.59□□□□□ -1.35
SMG1-208ENST00000563448 IFITM1P13164 125 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms