RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 TIMM21Q9BVV7 248 aa4.29□□□□□ -1.72
HERPUD1-206ENST00000563343 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
HERPUD1-206ENST00000563343 BIN3Q9NQY0 253 aa4.29□□□□□ -1.72
HERPUD1-206ENST00000563343 TP73-AS1Q9UF72 201 aa4.29□□□□□ -1.72
HERPUD1-206ENST00000563343 A0A1B0GV50 99 aa4.28□□□□□ -1.72
HERPUD1-206ENST00000563343 A4D1N5 150 aa4.28□□□□□ -1.72
HERPUD1-206ENST00000563343 SMIM6P0DI80 62 aa4.28□□□□□ -1.72
HERPUD1-206ENST00000563343 SFT2D1Q8WV19 159 aa4.28□□□□□ -1.72
HERPUD1-206ENST00000563343 ZNF727A8MUV8 499 aa4.27□□□□□ -1.73
HERPUD1-206ENST00000563343 UMAD1C9J7I0 102 aa4.27□□□□□ -1.73
HERPUD1-206ENST00000563343 F8W036 122 aa4.27□□□□□ -1.73
HERPUD1-206ENST00000563343 RAB5BP61020 215 aa4.27□□□□□ -1.73
HERPUD1-206ENST00000563343 RHEBQ15382 184 aa4.27□□□□□ -1.73
HERPUD1-206ENST00000563343 SPAG11AQ6PDA7 123 aa4.27□□□□□ -1.73
HERPUD1-206ENST00000563343 LINC00469Q8N7U9 141 aa4.27□□□□□ -1.73
HERPUD1-206ENST00000563343 LINC00167Q96N53 147 aa4.27□□□□□ -1.73
HERPUD1-206ENST00000563343 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
HERPUD1-206ENST00000563343 XAGE1AQ9HD64 81 aa4.27□□□□□ -1.73
HERPUD1-206ENST00000563343 SMCO4Q9NRQ5 59 aa4.27□□□□□ -1.73
HERPUD1-206ENST00000563343 RPL37AP8A6NKH3 93 aa4.26□□□□□ -1.73
HERPUD1-206ENST00000563343 PRYO14603 147 aa4.26□□□□□ -1.73
HERPUD1-206ENST00000563343 SCO1O75880 301 aa4.26□□□□□ -1.73
HERPUD1-206ENST00000563343 GNG4P50150 75 aa4.26□□□□□ -1.73
HERPUD1-206ENST00000563343 SMAGPQ0VAQ4 97 aa4.26□□□□□ -1.73
HERPUD1-206ENST00000563343 PEA15Q15121 130 aa4.26□□□□□ -1.73
HERPUD1-206ENST00000563343 SMIM15Q7Z3B0 74 aa4.26□□□□□ -1.73
HERPUD1-206ENST00000563343 LINC00518Q8N0U6 118 aa4.26□□□□□ -1.73
HERPUD1-206ENST00000563343 FAM213BQ8TBF2 198 aa4.26□□□□□ -1.73
HERPUD1-206ENST00000563343 K7EN84 100 aa4.25□□□□□ -1.73
HERPUD1-206ENST00000563343 VCYO14598 125 aa4.25□□□□□ -1.73
HERPUD1-206ENST00000563343 MT-ND4LP03901 98 aa4.25□□□□□ -1.73
HERPUD1-206ENST00000563343 RAB4AP20338 218 aa4.25□□□□□ -1.73
HERPUD1-206ENST00000563343 FCER1GP30273 86 aa4.25□□□□□ -1.73
HERPUD1-206ENST00000563343 TAGLN2P37802 199 aaKnown RBP4.25□□□□□ -1.73
HERPUD1-206ENST00000563343 RPL39P62891 51 aaKnown RBP4.25□□□□□ -1.73
HERPUD1-206ENST00000563343 NRACQ8N912 160 aa4.25□□□□□ -1.73
HERPUD1-206ENST00000563343 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
HERPUD1-206ENST00000563343 USH2AO75445 5202 aa4.24□□□□□ -1.73
HERPUD1-206ENST00000563343 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
HERPUD1-206ENST00000563343 MRPS36P82909 103 aaKnown RBP4.24□□□□□ -1.73
HERPUD1-206ENST00000563343 TMEM191AQ9H0A3 160 aa4.24□□□□□ -1.73
HERPUD1-206ENST00000563343 TGIF2-C20orf24A0A0A6YYL0 155 aa4.23□□□□□ -1.73
HERPUD1-206ENST00000563343 SMKR1H3BMG3 65 aa4.23□□□□□ -1.73
HERPUD1-206ENST00000563343 S100A6P06703 90 aa4.23□□□□□ -1.73
HERPUD1-206ENST00000563343 UBE2AP49459 152 aa4.23□□□□□ -1.73
HERPUD1-206ENST00000563343 PNRC1Q12796 327 aaPredicted RBP4.23□□□□□ -1.73
HERPUD1-206ENST00000563343 AMN1Q8IY45 258 aa4.23□□□□□ -1.73
HERPUD1-206ENST00000563343 PLEKHB2Q96CS7 222 aa4.23□□□□□ -1.73
HERPUD1-206ENST00000563343 MANBALQ9NQG1 85 aa4.23□□□□□ -1.73
HERPUD1-206ENST00000563343 GNG13Q9P2W3 67 aa4.23□□□□□ -1.73
HERPUD1-206ENST00000563343 IGLV5-37A0A075B6J1 123 aa4.22□□□□□ -1.73
HERPUD1-206ENST00000563343 IFITM10A6NMD0 228 aa4.22□□□□□ -1.73
HERPUD1-206ENST00000563343 ADCYAP1P18509 176 aa4.22□□□□□ -1.73
HERPUD1-206ENST00000563343 RPL32P62910 135 aaKnown RBP4.22□□□□□ -1.73
HERPUD1-206ENST00000563343 HBBP68871 147 aa4.22□□□□□ -1.73
HERPUD1-206ENST00000563343 PRLHP81277 87 aa4.22□□□□□ -1.73
HERPUD1-206ENST00000563343 FAM74A3Q4VXF1 159 aa4.22□□□□□ -1.73
HERPUD1-206ENST00000563343 LINC01561Q8N1V8 128 aa4.22□□□□□ -1.73
HERPUD1-206ENST00000563343 DAND5Q8N907 189 aa4.22□□□□□ -1.73
HERPUD1-206ENST00000563343 OCC1Q8TAD7 63 aa4.22□□□□□ -1.73
HERPUD1-206ENST00000563343 TMEM18Q96B42 140 aa4.22□□□□□ -1.73
HERPUD1-206ENST00000563343 KIR2DL4Q99706 377 aa4.22□□□□□ -1.73
HERPUD1-206ENST00000563343 KRTAP4-16G5E9R7 235 aaPredicted RBP4.21□□□□□ -1.74
HERPUD1-206ENST00000563343 M0R2T5 61 aa4.21□□□□□ -1.74
HERPUD1-206ENST00000563343 C12orf57Q99622 126 aa4.21□□□□□ -1.74
HERPUD1-206ENST00000563343 SPANXA1Q9NS26 97 aa4.21□□□□□ -1.74
HERPUD1-206ENST00000563343 PDE6DO43924 150 aa4.2□□□□□ -1.74
HERPUD1-206ENST00000563343 SPINK1P00995 79 aa4.2□□□□□ -1.74
HERPUD1-206ENST00000563343 S100PP25815 95 aa4.2□□□□□ -1.74
HERPUD1-206ENST00000563343 PCOTHQ58A44 107 aa4.2□□□□□ -1.74
HERPUD1-206ENST00000563343 Q8N377 158 aa4.2□□□□□ -1.74
HERPUD1-206ENST00000563343 Q8NBF4 154 aa4.2□□□□□ -1.74
HERPUD1-206ENST00000563343 IGLV8-61A0A075B6I0 122 aa4.19□□□□□ -1.74
HERPUD1-206ENST00000563343 C5orf52A6NGY3 159 aa4.19□□□□□ -1.74
HERPUD1-206ENST00000563343 COLCA2A8K830 154 aa4.19□□□□□ -1.74
HERPUD1-206ENST00000563343 A8MWL6 223 aa4.19□□□□□ -1.74
HERPUD1-206ENST00000563343 AKR1D1P51857 326 aa4.19□□□□□ -1.74
HERPUD1-206ENST00000563343 FAM231DQ6ZW35 169 aa4.19□□□□□ -1.74
HERPUD1-206ENST00000563343 CBLN2Q8IUK8 224 aa4.19□□□□□ -1.74
HERPUD1-206ENST00000563343 Q8IZM0 81 aa4.19□□□□□ -1.74
HERPUD1-206ENST00000563343 EIF5A2Q9GZV4 153 aaKnown RBP4.19□□□□□ -1.74
HERPUD1-206ENST00000563343 RPS10P5Q9NQ39 176 aa4.19□□□□□ -1.74
HERPUD1-206ENST00000563343 IGLV4-3A0A075B6K6 122 aa4.18□□□□□ -1.74
HERPUD1-206ENST00000563343 TRBV24-1A0A075B6N3 115 aa4.18□□□□□ -1.74
HERPUD1-206ENST00000563343 IGKV2-28A0A075B6P5 120 aa4.18□□□□□ -1.74
HERPUD1-206ENST00000563343 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
HERPUD1-206ENST00000563343 A0A1B0GUT8 65 aa4.18□□□□□ -1.74
HERPUD1-206ENST00000563343 PPP1R2P9O14990 202 aa4.18□□□□□ -1.74
HERPUD1-206ENST00000563343 GATCO43716 136 aaKnown RBP4.18□□□□□ -1.74
HERPUD1-206ENST00000563343 PPP1R17O96001 155 aa4.18□□□□□ -1.74
HERPUD1-206ENST00000563343 IGKV2D-28P01615 120 aa4.18□□□□□ -1.74
HERPUD1-206ENST00000563343 RAB5AP20339 215 aa4.18□□□□□ -1.74
HERPUD1-206ENST00000563343 SPRR4Q96PI1 79 aa4.18□□□□□ -1.74
HERPUD1-206ENST00000563343 TOMM7Q9P0U1 55 aa4.18□□□□□ -1.74
HERPUD1-206ENST00000563343 TMEM238C9JI98 176 aa4.17□□□□□ -1.74
HERPUD1-206ENST00000563343 F8VRH5 84 aa4.17□□□□□ -1.74
HERPUD1-206ENST00000563343 PRSS2P07478 247 aa4.17□□□□□ -1.74
HERPUD1-206ENST00000563343 NPSP0C0P6 89 aa4.17□□□□□ -1.74
HERPUD1-206ENST00000563343 S100A2P29034 98 aa4.17□□□□□ -1.74
HERPUD1-206ENST00000563343 CKS1BP61024 79 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms