RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 SNURFQ9Y675 71 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 WDFY3Q8IZQ1 3526 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 MYO15AQ9UKN7 3530 aa3.67□□□□□ -1.82
CAPN3-211ENST00000562199 MALRD1Q5VYJ5 2156 aa3.66□□□□□ -1.82
CAPN3-211ENST00000562199 MUC4Q99102 2169 aa3.66□□□□□ -1.82
CAPN3-211ENST00000562199 IGHV3-73A0A0B4J1V6 119 aa3.66□□□□□ -1.82
CAPN3-211ENST00000562199 IGIPA6NJ69 53 aa3.66□□□□□ -1.82
CAPN3-211ENST00000562199 C10orf25Q5T742 122 aa3.66□□□□□ -1.82
CAPN3-211ENST00000562199 Q6ZQT0 140 aa3.66□□□□□ -1.82
CAPN3-211ENST00000562199 Q8N9P0 234 aaPredicted RBP3.66□□□□□ -1.82
CAPN3-211ENST00000562199 LINC01560Q8TB33 94 aa3.66□□□□□ -1.82
CAPN3-211ENST00000562199 AMELXQ99217 191 aa3.66□□□□□ -1.82
CAPN3-211ENST00000562199 IGHV3OR16-8A0A075B7F1 116 aa3.65□□□□□ -1.83
CAPN3-211ENST00000562199 IGKV3D-7A0A0C4DH55 119 aa3.65□□□□□ -1.83
CAPN3-211ENST00000562199 A0A0J9YX75 114 aa3.65□□□□□ -1.83
CAPN3-211ENST00000562199 TRBV6-5A0A0K0K1A5 114 aa3.65□□□□□ -1.83
CAPN3-211ENST00000562199 BPY2O14599 106 aa3.65□□□□□ -1.83
CAPN3-211ENST00000562199 POLR2KP53803 58 aaKnown RBP3.65□□□□□ -1.83
CAPN3-211ENST00000562199 C14orf178Q8N769 122 aaPredicted RBP3.65□□□□□ -1.83
CAPN3-211ENST00000562199 TMEM263Q8WUH6 116 aaKnown RBP3.65□□□□□ -1.83
CAPN3-211ENST00000562199 KIF25-AS1Q9Y6Z4 181 aa3.65□□□□□ -1.83
CAPN3-211ENST00000562199 CEP290O15078 2479 aa3.65□□□□□ -1.83
CAPN3-211ENST00000562199 CADP27708 2225 aa3.64□□□□□ -1.83
CAPN3-211ENST00000562199 ARFGEF3Q5TH69 2177 aa3.64□□□□□ -1.83
CAPN3-211ENST00000562199 TRAV23DV6A0A075B6W5 121 aa3.64□□□□□ -1.83
CAPN3-211ENST00000562199 A0A1B0GVX0 72 aa3.64□□□□□ -1.83
CAPN3-211ENST00000562199 SMIM1B2RUZ4 78 aa3.64□□□□□ -1.83
CAPN3-211ENST00000562199 BAALC-AS2P0C853 105 aa3.64□□□□□ -1.83
CAPN3-211ENST00000562199 RNASE3P12724 160 aaKnown RBP3.64□□□□□ -1.83
CAPN3-211ENST00000562199 LINC00315P59091 139 aa3.64□□□□□ -1.83
CAPN3-211ENST00000562199 MUSTN1Q8IVN3 82 aa3.64□□□□□ -1.83
CAPN3-211ENST00000562199 KLHL30-AS1Q8NEE0 82 aa3.64□□□□□ -1.83
CAPN3-211ENST00000562199 FAM186AA6NE01 2351 aa3.64□□□□□ -1.83
CAPN3-211ENST00000562199 TNRC18O15417 2968 aaPredicted RBP3.64□□□□□ -1.83
CAPN3-211ENST00000562199 NDUFA4O00483 81 aa3.63□□□□□ -1.83
CAPN3-211ENST00000562199 TMEM254Q8TBM7 123 aa3.63□□□□□ -1.83
CAPN3-211ENST00000562199 EYSQ5T1H1 3165 aa3.63□□□□□ -1.83
CAPN3-211ENST00000562199 ZGRF1Q86YA3 2104 aa3.62□□□□□ -1.83
CAPN3-211ENST00000562199 TRAV12-3A0A0B4J271 114 aa3.62□□□□□ -1.83
CAPN3-211ENST00000562199 A6NDX4 124 aa3.62□□□□□ -1.83
CAPN3-211ENST00000562199 G3V318 75 aa3.62□□□□□ -1.83
CAPN3-211ENST00000562199 H3BUA1 57 aa3.62□□□□□ -1.83
CAPN3-211ENST00000562199 DNAL4O96015 105 aa3.62□□□□□ -1.83
CAPN3-211ENST00000562199 RPL39P62891 51 aaKnown RBP3.62□□□□□ -1.83
CAPN3-211ENST00000562199 C5orf56Q8N8D9 126 aa3.62□□□□□ -1.83
CAPN3-211ENST00000562199 LINC01006Q8NI28 216 aa3.62□□□□□ -1.83
CAPN3-211ENST00000562199 MUC7Q8TAX7 377 aa3.62□□□□□ -1.83
CAPN3-211ENST00000562199 C14orf132Q9NPU4 83 aa3.62□□□□□ -1.83
CAPN3-211ENST00000562199 C22orf24Q9Y442 160 aa3.62□□□□□ -1.83
CAPN3-211ENST00000562199 PLCE1Q9P212 2302 aa3.62□□□□□ -1.83
CAPN3-211ENST00000562199 TRIOO75962 3097 aa3.62□□□□□ -1.83
CAPN3-211ENST00000562199 A0A087WSZ3 146 aa3.61□□□□□ -1.83
CAPN3-211ENST00000562199 IGKV2-30P06310 120 aa3.61□□□□□ -1.83
CAPN3-211ENST00000562199 LINC01547P58512 204 aaPredicted RBP3.61□□□□□ -1.83
CAPN3-211ENST00000562199 MIR22HGQ0VDD5 57 aa3.61□□□□□ -1.83
CAPN3-211ENST00000562199 Q1RN00 199 aa3.61□□□□□ -1.83
CAPN3-211ENST00000562199 CIRBP-AS1Q8TBR5 109 aa3.61□□□□□ -1.83
CAPN3-211ENST00000562199 RPL36ALQ969Q0 106 aaKnown RBP3.61□□□□□ -1.83
CAPN3-211ENST00000562199 FREM2Q5SZK8 3169 aa3.61□□□□□ -1.83
CAPN3-211ENST00000562199 SVILO95425 2214 aa3.6□□□□□ -1.83
CAPN3-211ENST00000562199 RTL8CO15255 209 aa3.6□□□□□ -1.83
CAPN3-211ENST00000562199 TLX1NBP0CAT3 122 aa3.6□□□□□ -1.83
CAPN3-211ENST00000562199 DNAH10OSP0CZ25 163 aa3.6□□□□□ -1.83
CAPN3-211ENST00000562199 DEFB123Q8N688 67 aa3.6□□□□□ -1.83
CAPN3-211ENST00000562199 C15orf56Q8N910 161 aa3.6□□□□□ -1.83
CAPN3-211ENST00000562199 LITAFQ99732 161 aa3.6□□□□□ -1.83
CAPN3-211ENST00000562199 ICOSQ9Y6W8 199 aa3.6□□□□□ -1.83
CAPN3-211ENST00000562199 CFAP54Q96N23 3096 aa3.6□□□□□ -1.83
CAPN3-211ENST00000562199 H7C2G1 150 aa3.59□□□□□ -1.83
CAPN3-211ENST00000562199 M0QY20 66 aa3.59□□□□□ -1.83
CAPN3-211ENST00000562199 DEFB1P60022 68 aa3.59□□□□□ -1.83
CAPN3-211ENST00000562199 NTM-AS1Q6ZSK4 140 aa3.59□□□□□ -1.83
CAPN3-211ENST00000562199 Q8NBF4 154 aa3.59□□□□□ -1.83
CAPN3-211ENST00000562199 USMG5Q96IX5 58 aa3.59□□□□□ -1.83
CAPN3-211ENST00000562199 PRR15LQ9BU68 103 aa3.59□□□□□ -1.83
CAPN3-211ENST00000562199 CUL9Q8IWT3 2517 aa3.59□□□□□ -1.84
CAPN3-211ENST00000562199 I3L3M4 83 aa3.58□□□□□ -1.84
CAPN3-211ENST00000562199 P0C880 135 aa3.58□□□□□ -1.84
CAPN3-211ENST00000562199 ELOF1P60002 83 aaKnown RBP3.58□□□□□ -1.84
CAPN3-211ENST00000562199 C20orf166-AS1Q96NR2 134 aa3.58□□□□□ -1.84
CAPN3-211ENST00000562199 LINC00846Q9NV44 126 aa3.58□□□□□ -1.84
CAPN3-211ENST00000562199 IGHV3-64A0A075B6Q5 118 aa3.57□□□□□ -1.84
CAPN3-211ENST00000562199 FAM74A4Q5TZK3 123 aa3.57□□□□□ -1.84
CAPN3-211ENST00000562199 OBSCN-AS1Q96MR7 158 aa3.57□□□□□ -1.84
CAPN3-211ENST00000562199 RHPN1-AS1Q9BWJ2 59 aa3.57□□□□□ -1.84
CAPN3-211ENST00000562199 GPR179Q6PRD1 2367 aa3.56□□□□□ -1.84
CAPN3-211ENST00000562199 FRYLO94915 3013 aa3.56□□□□□ -1.84
CAPN3-211ENST00000562199 IGLV10-54A0A075B6I4 117 aa3.56□□□□□ -1.84
CAPN3-211ENST00000562199 A8MUU9 505 aa3.56□□□□□ -1.84
CAPN3-211ENST00000562199 CSAG1Q6PB30 78 aa3.56□□□□□ -1.84
CAPN3-211ENST00000562199 KRTAP1-5Q9BYS1 174 aa3.56□□□□□ -1.84
CAPN3-211ENST00000562199 SPENQ96T58 3664 aaKnown RBP3.56□□□□□ -1.84
CAPN3-211ENST00000562199 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.55□□□□□ -1.84
CAPN3-211ENST00000562199 H3BPC8 53 aa3.55□□□□□ -1.84
CAPN3-211ENST00000562199 NDUFA1O15239 70 aa3.55□□□□□ -1.84
CAPN3-211ENST00000562199 NREPQ16612 68 aa3.55□□□□□ -1.84
CAPN3-211ENST00000562199 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.55□□□□□ -1.84
CAPN3-211ENST00000562199 MIR7-3HGQ8N6C7 128 aa3.55□□□□□ -1.84
CAPN3-211ENST00000562199 Q8NAQ8 132 aa3.55□□□□□ -1.84
CAPN3-211ENST00000562199 DEFB104AQ8WTQ1 72 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms