RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 UNQ6190/PRO20217Q6UXQ8 127 aa7.37□□□□□ -1.23
GTF3C1-202ENST00000561623 LINC01006Q8NI28 216 aa7.37□□□□□ -1.23
GTF3C1-202ENST00000561623 IGLV9-49A0A0B4J1Y8 123 aa7.36□□□□□ -1.23
GTF3C1-202ENST00000561623 SPINK1P00995 79 aa7.36□□□□□ -1.23
GTF3C1-202ENST00000561623 LINC00846Q9NV44 126 aa7.36□□□□□ -1.23
GTF3C1-202ENST00000561623 NHLRC4P0CG21 123 aaPredicted RBP7.36□□□□□ -1.23
GTF3C1-202ENST00000561623 Q8N9L7 120 aa7.36□□□□□ -1.23
GTF3C1-202ENST00000561623 IGLV4-60A0A075B6I1 120 aa7.35□□□□□ -1.23
GTF3C1-202ENST00000561623 TRBV10-3A0A0K0K1G6 114 aa7.35□□□□□ -1.23
GTF3C1-202ENST00000561623 BRI3O95415 125 aa7.35□□□□□ -1.23
GTF3C1-202ENST00000561623 AMELXQ99217 191 aa7.35□□□□□ -1.23
GTF3C1-202ENST00000561623 SMCPP49901 116 aaPredicted RBP7.35□□□□□ -1.23
GTF3C1-202ENST00000561623 MUC22E2RYF6 1773 aaPredicted RBP7.35□□□□□ -1.23
GTF3C1-202ENST00000561623 LINC00208Q96KT6 92 aa7.35□□□□□ -1.23
GTF3C1-202ENST00000561623 C16orf90A8MZG2 172 aa7.34□□□□□ -1.23
GTF3C1-202ENST00000561623 PRO3102Q9H379 93 aa7.34□□□□□ -1.23
GTF3C1-202ENST00000561623 Q6ZSN1 163 aa7.34□□□□□ -1.23
GTF3C1-202ENST00000561623 C2CD3Q4AC94 2353 aa7.33□□□□□ -1.24
GTF3C1-202ENST00000561623 EP400Q96L91 3159 aa7.33□□□□□ -1.24
GTF3C1-202ENST00000561623 LELP1Q5T871 98 aa7.33□□□□□ -1.24
GTF3C1-202ENST00000561623 COX8CQ7Z4L0 72 aa7.33□□□□□ -1.24
GTF3C1-202ENST00000561623 TRBV7-7A0A0K0K1E9 115 aa7.32□□□□□ -1.24
GTF3C1-202ENST00000561623 A8MTW9 85 aa7.32□□□□□ -1.24
GTF3C1-202ENST00000561623 KPRPQ5T749 579 aaPredicted RBP7.32□□□□□ -1.24
GTF3C1-202ENST00000561623 TRBV7-6A0A0J9YX20 115 aa7.31□□□□□ -1.24
GTF3C1-202ENST00000561623 C1orf137Q5JT78 98 aa7.31□□□□□ -1.24
GTF3C1-202ENST00000561623 CDSNQ15517 529 aa7.3□□□□□ -1.24
GTF3C1-202ENST00000561623 LINC00575Q6W349 94 aa7.3□□□□□ -1.24
GTF3C1-202ENST00000561623 ABCA12Q86UK0 2595 aa7.3□□□□□ -1.24
GTF3C1-202ENST00000561623 BEAN1Q3B7T3 259 aa7.3□□□□□ -1.24
GTF3C1-202ENST00000561623 C4orf26Q17RF5 130 aa7.29□□□□□ -1.24
GTF3C1-202ENST00000561623 C6orf223Q8N319 242 aa7.29□□□□□ -1.24
GTF3C1-202ENST00000561623 PTPRSQ13332 1948 aa7.29□□□□□ -1.24
GTF3C1-202ENST00000561623 PRO0461Q9UI25 63 aa7.29□□□□□ -1.24
GTF3C1-202ENST00000561623 NAV2Q8IVL1 2488 aa7.29□□□□□ -1.24
GTF3C1-202ENST00000561623 TMEM254Q8TBM7 123 aa7.29□□□□□ -1.24
GTF3C1-202ENST00000561623 ODF3L2Q3SX64 289 aa7.29□□□□□ -1.24
GTF3C1-202ENST00000561623 CIRBP-AS1Q8TBR5 109 aa7.29□□□□□ -1.24
GTF3C1-202ENST00000561623 LINC01547P58512 204 aaPredicted RBP7.29□□□□□ -1.24
GTF3C1-202ENST00000561623 DEFB116Q30KQ4 102 aa7.29□□□□□ -1.24
GTF3C1-202ENST00000561623 AVPP01185 164 aa7.28□□□□□ -1.24
GTF3C1-202ENST00000561623 MRGPRG-AS1Q2M3A8 158 aa7.28□□□□□ -1.24
GTF3C1-202ENST00000561623 TET2Q6N021 2002 aaPredicted RBP7.28□□□□□ -1.24
GTF3C1-202ENST00000561623 ESRGQ1W209 222 aa7.28□□□□□ -1.24
GTF3C1-202ENST00000561623 PCOTHQ58A44 107 aa7.28□□□□□ -1.24
GTF3C1-202ENST00000561623 FASNP49327 2511 aaKnown RBP7.27□□□□□ -1.25
GTF3C1-202ENST00000561623 PLAC8L1A1L4L8 177 aa7.27□□□□□ -1.25
GTF3C1-202ENST00000561623 WWC2-AS2Q96NR7 200 aa7.27□□□□□ -1.25
GTF3C1-202ENST00000561623 COL5A1P20908 1838 aaPredicted RBP7.26□□□□□ -1.25
GTF3C1-202ENST00000561623 GOLGB1Q14789 3259 aaKnown RBP7.26□□□□□ -1.25
GTF3C1-202ENST00000561623 EXPH5Q8NEV8 1989 aa7.26□□□□□ -1.25
GTF3C1-202ENST00000561623 CPAMD8Q8IZJ3 1885 aa7.26□□□□□ -1.25
GTF3C1-202ENST00000561623 Q8N2B8 174 aa7.26□□□□□ -1.25
GTF3C1-202ENST00000561623 LINC01546A6NGU7 62 aa7.25□□□□□ -1.25
GTF3C1-202ENST00000561623 RAI1Q7Z5J4 1906 aaPredicted RBP7.25□□□□□ -1.25
GTF3C1-202ENST00000561623 FN1P02751 2386 aaKnown RBP7.25□□□□□ -1.25
GTF3C1-202ENST00000561623 FHL2Q14192 279 aa7.25□□□□□ -1.25
GTF3C1-202ENST00000561623 COX6B2Q6YFQ2 88 aa7.25□□□□□ -1.25
GTF3C1-202ENST00000561623 PRO0628Q9UI54 55 aa7.25□□□□□ -1.25
GTF3C1-202ENST00000561623 C10orf25Q5T742 122 aa7.25□□□□□ -1.25
GTF3C1-202ENST00000561623 MUC7Q8TAX7 377 aa7.25□□□□□ -1.25
GTF3C1-202ENST00000561623 SPINT4Q6UDR6 99 aa7.24□□□□□ -1.25
GTF3C1-202ENST00000561623 Q9UF83 564 aa7.24□□□□□ -1.25
GTF3C1-202ENST00000561623 IGF2RP11717 2491 aa7.24□□□□□ -1.25
GTF3C1-202ENST00000561623 ZNF706Q9Y5V0 76 aaPredicted RBP7.24□□□□□ -1.25
GTF3C1-202ENST00000561623 EGFEM1PQ0D2K5 195 aa7.24□□□□□ -1.25
GTF3C1-202ENST00000561623 LRP4O75096 1905 aa7.24□□□□□ -1.25
GTF3C1-202ENST00000561623 CRYGAP11844 174 aa7.23□□□□□ -1.25
GTF3C1-202ENST00000561623 KIF25-AS1Q9Y6Z4 181 aa7.23□□□□□ -1.25
GTF3C1-202ENST00000561623 H0Y9P7 68 aa7.23□□□□□ -1.25
GTF3C1-202ENST00000561623 FAM218AQ96MZ4 157 aa7.22□□□□□ -1.25
GTF3C1-202ENST00000561623 IGHV6-1A0A0B4J1U7 121 aa7.22□□□□□ -1.25
GTF3C1-202ENST00000561623 REG3GQ6UW15 175 aa7.22□□□□□ -1.25
GTF3C1-202ENST00000561623 LINC00474Q9P2X8 69 aa7.21□□□□□ -1.25
GTF3C1-202ENST00000561623 PRLHP81277 87 aa7.21□□□□□ -1.25
GTF3C1-202ENST00000561623 AGRNO00468 2067 aa7.21□□□□□ -1.25
GTF3C1-202ENST00000561623 A0A087WSZ3 146 aa7.21□□□□□ -1.26
GTF3C1-202ENST00000561623 TLN1Q9Y490 2541 aaKnown RBP7.2□□□□□ -1.26
GTF3C1-202ENST00000561623 C10orf142B7Z368 130 aa7.2□□□□□ -1.26
GTF3C1-202ENST00000561623 VPREB1P12018 145 aa7.2□□□□□ -1.26
GTF3C1-202ENST00000561623 SMIM29Q86T20 159 aa7.2□□□□□ -1.26
GTF3C1-202ENST00000561623 LINC01556Q5JQF7 62 aa7.19□□□□□ -1.26
GTF3C1-202ENST00000561623 HCG22E2RYF7 251 aa7.19□□□□□ -1.26
GTF3C1-202ENST00000561623 CXCL6P80162 114 aa7.19□□□□□ -1.26
GTF3C1-202ENST00000561623 MDFIQ99750 246 aa7.19□□□□□ -1.26
GTF3C1-202ENST00000561623 IGLV5-39A0A0G2JS06 123 aa7.18□□□□□ -1.26
GTF3C1-202ENST00000561623 LINC00315P59091 139 aa7.18□□□□□ -1.26
GTF3C1-202ENST00000561623 Q9BRP9 147 aa7.18□□□□□ -1.26
GTF3C1-202ENST00000561623 SPATA3Q8NHX4 192 aa7.17□□□□□ -1.26
GTF3C1-202ENST00000561623 F8P00451 2351 aa7.17□□□□□ -1.26
GTF3C1-202ENST00000561623 SBSPONQ8IVN8 264 aa7.17□□□□□ -1.26
GTF3C1-202ENST00000561623 KRTAP24-1Q3LI83 254 aa7.16□□□□□ -1.26
GTF3C1-202ENST00000561623 A0A1W2PPR1 153 aa7.15□□□□□ -1.26
GTF3C1-202ENST00000561623 RPS28P62857 69 aaKnown RBP7.15□□□□□ -1.26
GTF3C1-202ENST00000561623 WDR87Q6ZQQ6 2873 aa7.15□□□□□ -1.27
GTF3C1-202ENST00000561623 Q6ZRU5 148 aa7.15□□□□□ -1.27
GTF3C1-202ENST00000561623 Q6ZTC4 211 aa7.15□□□□□ -1.27
GTF3C1-202ENST00000561623 A0A1B0GUV1 79 aa7.15□□□□□ -1.27
GTF3C1-202ENST00000561623 IGLV1-51P01701 117 aa7.15□□□□□ -1.27
GTF3C1-202ENST00000561623 MYO9AB2RTY4 2548 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms