RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 MAPKBP1O60336 1514 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 HERC2O95714 4834 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 NBPF19A0A087WUL8 3843 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 A0A1B0GWA3 101 aa-0.51□□□□□ -2.49
HMBOX1-216ENST00000561377 ADGRL2O95490 1459 aa-0.51□□□□□ -2.49
HMBOX1-216ENST00000561377 ADAMTS12P58397 1594 aa-0.51□□□□□ -2.49
HMBOX1-216ENST00000561377 DEFB112Q30KQ8 113 aa-0.51□□□□□ -2.49
HMBOX1-216ENST00000561377 SPG11Q96JI7 2443 aa-0.51□□□□□ -2.49
HMBOX1-216ENST00000561377 PAPPA2Q9BXP8 1791 aa-0.51□□□□□ -2.49
HMBOX1-216ENST00000561377 PTPN23Q9H3S7 1636 aa-0.51□□□□□ -2.49
HMBOX1-216ENST00000561377 LINC00846Q9NV44 126 aa-0.51□□□□□ -2.49
HMBOX1-216ENST00000561377 APLNQ9ULZ1 77 aa-0.51□□□□□ -2.49
HMBOX1-216ENST00000561377 LRRC37AA6NMS7 1700 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 PHLPP1O60346 1717 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 NUP188Q5SRE5 1749 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 UNC13AQ9UPW8 1703 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 PLEKHH2Q8IVE3 1493 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 NLRP1Q9C000 1473 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 NAP1L6A6NFF2 107 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 I3L3M4 83 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 CCL22O00626 93 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 UBE2D3P61077 147 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 UBE2D2P62837 147 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 SEC11AP67812 179 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 CRIPTQ9P021 101 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 SONP18583 2426 aaKnown RBP-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 UBR4Q5T4S7 5183 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 ANKRD11Q6UB99 2663 aaPredicted RBP-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 KIAA1551Q9HCM1 1747 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 FMN2Q9NZ56 1722 aa-0.52□□□□□ -2.49
HMBOX1-216ENST00000561377 SCN7AQ01118 1682 aa-0.53□□□□□ -2.49
HMBOX1-216ENST00000561377 TOP2BQ02880 1626 aa-0.53□□□□□ -2.49
HMBOX1-216ENST00000561377 SLIT1O75093 1534 aa-0.53□□□□□ -2.49
HMBOX1-216ENST00000561377 STARD9Q9P2P6 4700 aa-0.53□□□□□ -2.49
HMBOX1-216ENST00000561377 FAT3Q8TDW7 4589 aa-0.53□□□□□ -2.49
HMBOX1-216ENST00000561377 LOC100130705A0A1B0GUX0 176 aa-0.53□□□□□ -2.49
HMBOX1-216ENST00000561377 FAM24AA6NFZ4 105 aa-0.53□□□□□ -2.49
HMBOX1-216ENST00000561377 H0YGG7 62 aa-0.53□□□□□ -2.49
HMBOX1-216ENST00000561377 TRAPPC2P0DI81 140 aa-0.53□□□□□ -2.49
HMBOX1-216ENST00000561377 TRAPPC2BP0DI82 140 aa-0.53□□□□□ -2.49
HMBOX1-216ENST00000561377 C12orf57Q99622 126 aa-0.53□□□□□ -2.49
HMBOX1-216ENST00000561377 PRO1854Q9UHT4 67 aa-0.53□□□□□ -2.49
HMBOX1-216ENST00000561377 BTAF1O14981 1849 aa-0.53□□□□□ -2.49
HMBOX1-216ENST00000561377 ZZEF1O43149 2961 aa-0.53□□□□□ -2.49
HMBOX1-216ENST00000561377 MYOM2P54296 1465 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 SCAPERQ9BY12 1400 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 PSME4Q14997 1843 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 MUC17Q685J3 4493 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 LAMA1P25391 3075 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 VPS13DQ5THJ4 4388 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 AKAP9Q99996 3911 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 MARF1Q9Y4F3 1742 aaKnown RBP-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 A0A1B0GU69 56 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 FAM223BA6NKX1 122 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 GNG7O60262 68 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 AKAIN1P0CW23 69 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 SNCAP37840 140 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 GNG11P61952 73 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 Q0VG73 95 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 H1FX-AS1Q4G0G2 97 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 CCDC58Q4VC31 144 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 PP6455Q8WZ26 134 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 SPRR2FQ96RM1 72 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 TSC22D3Q99576 134 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 MANBALQ9NQG1 85 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 LINC00474Q9P2X8 69 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 PKHD1L1Q86WI1 4243 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 TCHHQ07283 1943 aa-0.54□□□□□ -2.5
HMBOX1-216ENST00000561377 COL4A6Q14031 1691 aa-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 CUL7Q14999 1698 aa-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 ROBO1Q9Y6N7 1651 aa-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 LOC105371267A0A1B0GV96 52 aa-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 OOSP1A8MZH6 123 aa-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 H3BQ15 152 aa-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 H3BQF6 201 aa-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 KRTDAPP60985 99 aa-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 C6orf201Q7Z4U5 140 aa-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 LCN9Q8WX39 176 aa-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 DNAH3Q8TD57 4116 aa-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 EIF4G3O43432 1585 aaKnown RBP-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 ARHGAP5Q13017 1502 aa-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 NBASA2RRP1 2371 aa-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 CLIP1P30622 1438 aa-0.55□□□□□ -2.5
HMBOX1-216ENST00000561377 EPPK1P58107 5090 aaKnown RBP-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 TNRC18O15417 2968 aaPredicted RBP-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 NRKQ7Z2Y5 1582 aa-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 KNL1Q8NG31 2342 aa-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 TRAV30A0A087WSZ9 112 aa-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 A0A0G2JND7 137 aa-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 CRYM-AS1A6NIL9 109 aa-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 K7EP13 123 aa-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 MT1AP04731 61 aa-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 S100A12P80511 92 aa-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 CGREF1Q99674 301 aa-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 MRPL34Q9BQ48 92 aaKnown RBP-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 VAMP8Q9BV40 100 aa-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 DPH3P1Q9H4G8 78 aa-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 MYH7P12883 1935 aa-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 NCOA3Q9Y6Q9 1424 aa-0.56□□□□□ -2.5
HMBOX1-216ENST00000561377 DNAH9Q9NYC9 4486 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms