RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 ATP6V1G1O75348 118 aa4.54□□□□□ -1.68
ZEB1-223ENST00000561304 MT-ND4LP03901 98 aa4.54□□□□□ -1.68
ZEB1-223ENST00000561304 RAB5AP20339 215 aa4.54□□□□□ -1.68
ZEB1-223ENST00000561304 UBE2D1P51668 147 aa4.54□□□□□ -1.68
ZEB1-223ENST00000561304 CLLU1Q5K131 121 aa4.54□□□□□ -1.68
ZEB1-223ENST00000561304 SPINK6Q6UWN8 80 aa4.54□□□□□ -1.68
ZEB1-223ENST00000561304 C2orf66Q6UXQ4 117 aa4.54□□□□□ -1.68
ZEB1-223ENST00000561304 Q8N8P6 123 aa4.54□□□□□ -1.68
ZEB1-223ENST00000561304 TMEM141Q96I45 108 aa4.54□□□□□ -1.68
ZEB1-223ENST00000561304 MRPL35Q9NZE8 188 aaKnown RBP4.54□□□□□ -1.68
ZEB1-223ENST00000561304 PSORS1C2Q9UIG4 136 aa4.54□□□□□ -1.68
ZEB1-223ENST00000561304 LAMTOR2Q9Y2Q5 125 aa4.54□□□□□ -1.68
ZEB1-223ENST00000561304 LPAP08519 4548 aa4.54□□□□□ -1.68
ZEB1-223ENST00000561304 TGIF2-C20orf24A0A0A6YYL0 155 aa4.53□□□□□ -1.68
ZEB1-223ENST00000561304 TLX1NBP0CAT3 122 aa4.53□□□□□ -1.68
ZEB1-223ENST00000561304 S100A1P23297 94 aa4.53□□□□□ -1.68
ZEB1-223ENST00000561304 RAB14P61106 215 aa4.53□□□□□ -1.68
ZEB1-223ENST00000561304 KIAA1644Q3SXP7 199 aa4.53□□□□□ -1.68
ZEB1-223ENST00000561304 C2orf82Q6UX34 121 aa4.53□□□□□ -1.68
ZEB1-223ENST00000561304 AMELXQ99217 191 aa4.53□□□□□ -1.68
ZEB1-223ENST00000561304 IGIPA6NJ69 53 aa4.53□□□□□ -1.69
ZEB1-223ENST00000561304 KRTAP10-8P60410 259 aa4.53□□□□□ -1.69
ZEB1-223ENST00000561304 TEX43Q6ZNM6 134 aa4.53□□□□□ -1.69
ZEB1-223ENST00000561304 FAM19A5Q7Z5A7 132 aaPredicted RBP4.53□□□□□ -1.69
ZEB1-223ENST00000561304 CYSLTR1Q9Y271 337 aa4.53□□□□□ -1.69
ZEB1-223ENST00000561304 F8WDY8 70 aa4.52□□□□□ -1.69
ZEB1-223ENST00000561304 MT-ND6P03923 174 aa4.52□□□□□ -1.69
ZEB1-223ENST00000561304 GAGE2EQ4V326 116 aa4.52□□□□□ -1.69
ZEB1-223ENST00000561304 C1orf137Q5JT78 98 aa4.52□□□□□ -1.69
ZEB1-223ENST00000561304 C9orf129Q5T035 196 aaKnown RBP4.52□□□□□ -1.69
ZEB1-223ENST00000561304 IMMP2LQ96T52 175 aa4.52□□□□□ -1.69
ZEB1-223ENST00000561304 GAGE2DQ9UEU5 116 aa4.52□□□□□ -1.69
ZEB1-223ENST00000561304 TMEM218A2RU14 115 aa4.51□□□□□ -1.69
ZEB1-223ENST00000561304 ORMDL2Q53FV1 153 aa4.51□□□□□ -1.69
ZEB1-223ENST00000561304 REG3GQ6UW15 175 aa4.51□□□□□ -1.69
ZEB1-223ENST00000561304 FAM19A3Q7Z5A8 133 aa4.51□□□□□ -1.69
ZEB1-223ENST00000561304 C2orf88Q9BSF0 95 aa4.51□□□□□ -1.69
ZEB1-223ENST00000561304 TRBV30A0A0K0K1B3 111 aa4.5□□□□□ -1.69
ZEB1-223ENST00000561304 UQCC3Q6UW78 93 aa4.5□□□□□ -1.69
ZEB1-223ENST00000561304 Q6ZN92 141 aa4.5□□□□□ -1.69
ZEB1-223ENST00000561304 TOMM6Q96B49 74 aa4.5□□□□□ -1.69
ZEB1-223ENST00000561304 VCX2Q9H322 139 aa4.5□□□□□ -1.69
ZEB1-223ENST00000561304 NXT2Q9NPJ8 142 aaKnown RBP4.5□□□□□ -1.69
ZEB1-223ENST00000561304 CDKN2A-AS1Q9UH64 79 aa4.5□□□□□ -1.69
ZEB1-223ENST00000561304 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
ZEB1-223ENST00000561304 NDUFC2-KCTD14E9PQ53 114 aa4.49□□□□□ -1.69
ZEB1-223ENST00000561304 K7EMI3 77 aa4.49□□□□□ -1.69
ZEB1-223ENST00000561304 M0QXV9 152 aa4.49□□□□□ -1.69
ZEB1-223ENST00000561304 IGLV7-43P04211 117 aa4.49□□□□□ -1.69
ZEB1-223ENST00000561304 LINC01561Q8N1V8 128 aa4.49□□□□□ -1.69
ZEB1-223ENST00000561304 LINC00469Q8N7U9 141 aa4.49□□□□□ -1.69
ZEB1-223ENST00000561304 TIMM17AQ99595 171 aa4.49□□□□□ -1.69
ZEB1-223ENST00000561304 TOMM7Q9P0U1 55 aa4.49□□□□□ -1.69
ZEB1-223ENST00000561304 TRAV9-1A0A075B6T8 112 aa4.48□□□□□ -1.69
ZEB1-223ENST00000561304 NPSP0C0P6 89 aa4.48□□□□□ -1.69
ZEB1-223ENST00000561304 COMMD7Q86VX2 200 aa4.48□□□□□ -1.69
ZEB1-223ENST00000561304 Q8IZM0 81 aa4.48□□□□□ -1.69
ZEB1-223ENST00000561304 PACRGQ96M98 296 aaPredicted RBP4.48□□□□□ -1.69
ZEB1-223ENST00000561304 ALKBH7Q9BT30 221 aaPredicted RBP4.48□□□□□ -1.69
ZEB1-223ENST00000561304 SEC11CQ9BY50 192 aa4.48□□□□□ -1.69
ZEB1-223ENST00000561304 LINC01546A6NGU7 62 aa4.47□□□□□ -1.69
ZEB1-223ENST00000561304 SMIM1B2RUZ4 78 aa4.47□□□□□ -1.69
ZEB1-223ENST00000561304 HERVK_113P63121 156 aa4.47□□□□□ -1.69
ZEB1-223ENST00000561304 GNB1LQ9BYB4 327 aa4.47□□□□□ -1.69
ZEB1-223ENST00000561304 XAGE1AQ9HD64 81 aa4.47□□□□□ -1.69
ZEB1-223ENST00000561304 H0Y9J4 135 aa4.46□□□□□ -1.7
ZEB1-223ENST00000561304 PRSS2P07478 247 aa4.46□□□□□ -1.7
ZEB1-223ENST00000561304 KRTAP1-4P0C5Y4 121 aa4.46□□□□□ -1.7
ZEB1-223ENST00000561304 UBE2BP63146 152 aa4.46□□□□□ -1.7
ZEB1-223ENST00000561304 C6orf226Q5I0X4 101 aa4.46□□□□□ -1.7
ZEB1-223ENST00000561304 C10orf91Q5T1B1 145 aa4.46□□□□□ -1.7
ZEB1-223ENST00000561304 ERASQ7Z444 233 aa4.46□□□□□ -1.7
ZEB1-223ENST00000561304 PRR26Q8N8Z3 221 aa4.46□□□□□ -1.7
ZEB1-223ENST00000561304 SCGB3A1Q96QR1 104 aa4.46□□□□□ -1.7
ZEB1-223ENST00000561304 GEMIN7Q9H840 131 aaKnown RBP4.46□□□□□ -1.7
ZEB1-223ENST00000561304 IGLV5-45A0A087WSX0 123 aa4.45□□□□□ -1.7
ZEB1-223ENST00000561304 A0A096LNJ9 63 aa4.45□□□□□ -1.7
ZEB1-223ENST00000561304 TINCRA0A1B0GVN0 87 aa4.45□□□□□ -1.7
ZEB1-223ENST00000561304 F8VRH5 84 aa4.45□□□□□ -1.7
ZEB1-223ENST00000561304 CKS1BP61024 79 aa4.45□□□□□ -1.7
ZEB1-223ENST00000561304 DIRC1Q969H9 104 aa4.45□□□□□ -1.7
ZEB1-223ENST00000561304 URB1-AS1Q96HZ7 61 aa4.45□□□□□ -1.7
ZEB1-223ENST00000561304 CARHSP1Q9Y2V2 147 aaKnown RBP4.45□□□□□ -1.7
ZEB1-223ENST00000561304 PRYO14603 147 aa4.44□□□□□ -1.7
ZEB1-223ENST00000561304 SPINK8P0C7L1 97 aa4.44□□□□□ -1.7
ZEB1-223ENST00000561304 S100PP25815 95 aa4.44□□□□□ -1.7
ZEB1-223ENST00000561304 PAPPA-AS1Q5QFB9 102 aa4.44□□□□□ -1.7
ZEB1-223ENST00000561304 CST9LQ9H4G1 147 aa4.44□□□□□ -1.7
ZEB1-223ENST00000561304 RPS10P5Q9NQ39 176 aa4.44□□□□□ -1.7
ZEB1-223ENST00000561304 C22orf24Q9Y442 160 aa4.44□□□□□ -1.7
ZEB1-223ENST00000561304 G0S2P27469 103 aa4.43□□□□□ -1.7
ZEB1-223ENST00000561304 SEC11AP67812 179 aa4.43□□□□□ -1.7
ZEB1-223ENST00000561304 FABP9Q0Z7S8 132 aa4.43□□□□□ -1.7
ZEB1-223ENST00000561304 PDZD11Q5EBL8 140 aa4.43□□□□□ -1.7
ZEB1-223ENST00000561304 COX7B2Q8TF08 81 aa4.43□□□□□ -1.7
ZEB1-223ENST00000561304 VPREB1P12018 145 aa4.42□□□□□ -1.7
ZEB1-223ENST00000561304 CXCL5P42830 114 aa4.42□□□□□ -1.7
ZEB1-223ENST00000561304 PMVKQ15126 192 aa4.42□□□□□ -1.7
ZEB1-223ENST00000561304 RHEBQ15382 184 aa4.42□□□□□ -1.7
ZEB1-223ENST00000561304 PMCHL1Q16048 86 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms