RNA–Protein interactions for RNA: ENST00000561116.5

FAM227B-213, Transcript of family with sequence similarity 227 member B, humanhuman

TSL 3

Gene FAM227B, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-213ENST00000561116 UBA52P62987 128 aaKnown RBP0.38□□□□□ -2.35
FAM227B-213ENST00000561116 HAMPP81172 84 aa0.38□□□□□ -2.35
FAM227B-213ENST00000561116 PMCHL1Q16048 86 aa0.38□□□□□ -2.35
FAM227B-213ENST00000561116 NCMAPQ5T1S8 102 aa0.38□□□□□ -2.35
FAM227B-213ENST00000561116 FAM213BQ8TBF2 198 aa0.38□□□□□ -2.35
FAM227B-213ENST00000561116 TRGV9Q99603 122 aa0.38□□□□□ -2.35
FAM227B-213ENST00000561116 CDC42SE2Q9NRR3 84 aa0.38□□□□□ -2.35
FAM227B-213ENST00000561116 ARL2-SNX15V9GYD0 113 aa0.38□□□□□ -2.35
FAM227B-213ENST00000561116 BPTFQ12830 3046 aa0.38□□□□□ -2.35
FAM227B-213ENST00000561116 VWFP04275 2813 aa0.38□□□□□ -2.35
FAM227B-213ENST00000561116 CHD6Q8TD26 2715 aa0.38□□□□□ -2.35
FAM227B-213ENST00000561116 ABCA2Q9BZC7 2435 aa0.38□□□□□ -2.35
FAM227B-213ENST00000561116 KNL1Q8NG31 2342 aa0.38□□□□□ -2.35
FAM227B-213ENST00000561116 ABCC5O15440 1437 aa0.38□□□□□ -2.35
FAM227B-213ENST00000561116 PDE4DIPQ5VU43 2346 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 ATP10BO94823 1461 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 CCDC141Q6ZP82 1450 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 MAP1BP46821 2468 aaKnown RBP0.37□□□□□ -2.35
FAM227B-213ENST00000561116 TRAV22A0A0B4J277 110 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 TRBV6-1A0A0K0K1D8 114 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 hADV29S1A0JD25 119 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 GYPAP02724 150 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 SMIM11AP58511 58 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 PSMG4Q5JS54 123 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 ZNF720Q7Z2F6 126 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 FAM223AQ8IWN6 122 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 SERP2Q8N6R1 65 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 CNFNQ9BYD5 112 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 V9GYS6 101 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 POLR1AO95602 1720 aaPredicted RBP0.37□□□□□ -2.35
FAM227B-213ENST00000561116 FMN2Q9NZ56 1722 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 NHSL1Q5SYE7 1610 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 CUX1P39880 1505 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 CFAP43Q8NDM7 1665 aa0.37□□□□□ -2.35
FAM227B-213ENST00000561116 NLRP1Q9C000 1473 aa0.36□□□□□ -2.35
FAM227B-213ENST00000561116 DDX60LQ5H9U9 1706 aaKnown RBP0.36□□□□□ -2.35
FAM227B-213ENST00000561116 ANKRD36BQ8N2N9 1353 aa0.36□□□□□ -2.35
FAM227B-213ENST00000561116 PKD1L1Q8TDX9 2849 aa0.36□□□□□ -2.35
FAM227B-213ENST00000561116 TRBV25-1A0A075B6N4 114 aa0.36□□□□□ -2.35
FAM227B-213ENST00000561116 ZNF815PA8K554 130 aa0.36□□□□□ -2.35
FAM227B-213ENST00000561116 H3BQF6 201 aa0.36□□□□□ -2.35
FAM227B-213ENST00000561116 IGLC1P0CG04 106 aa0.36□□□□□ -2.35
FAM227B-213ENST00000561116 Q6JHZ5 121 aa0.36□□□□□ -2.35
FAM227B-213ENST00000561116 SSBP3-AS1Q7Z2R9 100 aa0.36□□□□□ -2.35
FAM227B-213ENST00000561116 TMEM263Q8WUH6 116 aaKnown RBP0.36□□□□□ -2.35
FAM227B-213ENST00000561116 LINC00472Q9H8W2 130 aa0.36□□□□□ -2.35
FAM227B-213ENST00000561116 CACFD1Q9UGQ2 172 aa0.36□□□□□ -2.35
FAM227B-213ENST00000561116 CEP162Q5TB80 1403 aa0.36□□□□□ -2.35
FAM227B-213ENST00000561116 CHD8Q9HCK8 2581 aa0.36□□□□□ -2.35
FAM227B-213ENST00000561116 SETBP1Q9Y6X0 1596 aa0.36□□□□□ -2.35
FAM227B-213ENST00000561116 POLA1P09884 1462 aaPredicted RBP0.35□□□□□ -2.35
FAM227B-213ENST00000561116 C1orf167Q5SNV9 1468 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 TMEM131LA2VDJ0 1609 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 ARFGEF2Q9Y6D5 1785 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 APC2O95996 2303 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.35□□□□□ -2.35
FAM227B-213ENST00000561116 PPRC1Q5VV67 1664 aaKnown RBP0.35□□□□□ -2.35
FAM227B-213ENST00000561116 PVALEFA0A1B0GWK0 134 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 FAM223BA6NKX1 122 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 C10orf142B7Z368 130 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 SYS1-DBNDD2H3BUS1 97 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 BCE1O60756 84 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 MT-ATP8P03928 68 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 FAUP35544 74 aaKnown RBP0.35□□□□□ -2.35
FAM227B-213ENST00000561116 HMGN3Q15651 99 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 PIGYQ3MUY2 71 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 SFTA2Q6UW10 78 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 FDCSPQ8NFU4 85 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 LINC00846Q9NV44 126 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 EDC4Q6P2E9 1401 aaKnown RBP0.35□□□□□ -2.35
FAM227B-213ENST00000561116 DCHS2Q6V1P9 2916 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 LRRIQ1Q96JM4 1722 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 CREBBPQ92793 2442 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 CCDC18Q5T9S5 1454 aa0.35□□□□□ -2.35
FAM227B-213ENST00000561116 NBASA2RRP1 2371 aa0.34□□□□□ -2.35
FAM227B-213ENST00000561116 PLCH1Q4KWH8 1693 aa0.34□□□□□ -2.35
FAM227B-213ENST00000561116 A0A0G2JND7 137 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 TRBV7-7A0A0K0K1E9 115 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 M0R3E3 92 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 RGPD1P0DJD0 1748 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 FLNAP21333 2647 aaKnown RBP0.34□□□□□ -2.36
FAM227B-213ENST00000561116 GNG2P59768 71 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 PEA15Q15121 130 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 ETDBQ3ZM63 59 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 ALKAL2Q6UX46 152 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 SPRR4Q96PI1 79 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 SNHG12Q9BXW3 62 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 UACAQ9BZF9 1416 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 RABAC1Q9UI14 185 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 PRO0255Q9UI72 69 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 LAMC1P11047 1609 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 PTPN23Q9H3S7 1636 aa0.34□□□□□ -2.36
FAM227B-213ENST00000561116 KMT2DO14686 5537 aa0.33□□□□□ -2.36
FAM227B-213ENST00000561116 TRBV7-4A0A0J9YYF1 115 aa0.33□□□□□ -2.36
FAM227B-213ENST00000561116 C7orf77A4D0Y5 90 aa0.33□□□□□ -2.36
FAM227B-213ENST00000561116 H7BZZ5 65 aa0.33□□□□□ -2.36
FAM227B-213ENST00000561116 GNGT1P63211 74 aa0.33□□□□□ -2.36
FAM227B-213ENST00000561116 PYY3Q5JQD4 70 aa0.33□□□□□ -2.36
FAM227B-213ENST00000561116 C10orf113Q5VZT2 155 aa0.33□□□□□ -2.36
FAM227B-213ENST00000561116 Q8IZM0 81 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms