RNA–Protein interactions for RNA: ENST00000561061.5

ZEB1-221, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 970 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-221ENST00000561061 SCGB1D1O95968 90 aa3.96□□□□□ -1.78
ZEB1-221ENST00000561061 TSHBP01222 138 aa3.96□□□□□ -1.78
ZEB1-221ENST00000561061 UBE2D1P51668 147 aa3.96□□□□□ -1.78
ZEB1-221ENST00000561061 TWIST1Q15672 202 aa3.96□□□□□ -1.78
ZEB1-221ENST00000561061 MRPL52Q86TS9 123 aaKnown RBP3.96□□□□□ -1.78
ZEB1-221ENST00000561061 OPRPNQ99935 248 aaPredicted RBP3.96□□□□□ -1.78
ZEB1-221ENST00000561061 CDC42SE2Q9NRR3 84 aa3.96□□□□□ -1.78
ZEB1-221ENST00000561061 TRBV6-5A0A0K0K1A5 114 aa3.95□□□□□ -1.78
ZEB1-221ENST00000561061 I3L3M4 83 aa3.95□□□□□ -1.78
ZEB1-221ENST00000561061 PMCHP20382 165 aa3.95□□□□□ -1.78
ZEB1-221ENST00000561061 GNG4P50150 75 aa3.95□□□□□ -1.78
ZEB1-221ENST00000561061 FOXA3P55318 350 aaPredicted RBP3.95□□□□□ -1.78
ZEB1-221ENST00000561061 TSKUQ8WUA8 353 aa3.95□□□□□ -1.78
ZEB1-221ENST00000561061 SMIM12Q96EX1 92 aa3.95□□□□□ -1.78
ZEB1-221ENST00000561061 MRAP2Q96G30 205 aa3.95□□□□□ -1.78
ZEB1-221ENST00000561061 GNB1LQ9BYB4 327 aa3.95□□□□□ -1.78
ZEB1-221ENST00000561061 OSTCQ9NRP0 149 aa3.95□□□□□ -1.78
ZEB1-221ENST00000561061 V9GYV3 84 aa3.95□□□□□ -1.78
ZEB1-221ENST00000561061 SERF1AO75920 110 aa3.94□□□□□ -1.78
ZEB1-221ENST00000561061 SPAG11BQ08648 103 aa3.94□□□□□ -1.78
ZEB1-221ENST00000561061 FAM19A5Q7Z5A7 132 aaPredicted RBP3.94□□□□□ -1.78
ZEB1-221ENST00000561061 BAGE3Q86Y29 109 aa3.94□□□□□ -1.78
ZEB1-221ENST00000561061 RNASE7Q9H1E1 156 aaKnown RBP3.94□□□□□ -1.78
ZEB1-221ENST00000561061 M0R143 59 aa3.93□□□□□ -1.78
ZEB1-221ENST00000561061 NUPR1O60356 82 aa3.93□□□□□ -1.78
ZEB1-221ENST00000561061 TSPAN13O95857 204 aa3.93□□□□□ -1.78
ZEB1-221ENST00000561061 RNASE13Q5GAN3 156 aaKnown RBP3.93□□□□□ -1.78
ZEB1-221ENST00000561061 TEX43Q6ZNM6 134 aa3.93□□□□□ -1.78
ZEB1-221ENST00000561061 TMEM136Q6ZRR5 245 aa3.93□□□□□ -1.78
ZEB1-221ENST00000561061 SMIM15Q7Z3B0 74 aa3.93□□□□□ -1.78
ZEB1-221ENST00000561061 C5orf38Q86SI9 138 aa3.93□□□□□ -1.78
ZEB1-221ENST00000561061 KRTAP7-1Q8IUC3 87 aa3.93□□□□□ -1.78
ZEB1-221ENST00000561061 Q8N9P0 234 aaPredicted RBP3.93□□□□□ -1.78
ZEB1-221ENST00000561061 RPP21Q9H633 154 aaKnown RBP3.93□□□□□ -1.78
ZEB1-221ENST00000561061 ST20Q9HBF5 79 aa3.93□□□□□ -1.78
ZEB1-221ENST00000561061 MRPL35Q9NZE8 188 aaKnown RBP3.93□□□□□ -1.78
ZEB1-221ENST00000561061 TRAV13-1A0A0B4J241 112 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 TRBV27A0A0K0K1C4 114 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 SMIM27A0A1W2PRY6 76 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 M0QXV9 152 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 TCAPO15273 167 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 TLX1NBP0CAT3 122 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 RAB4AP20338 218 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 POLR2KP53803 58 aaKnown RBP3.92□□□□□ -1.78
ZEB1-221ENST00000561061 SUMO2P61956 95 aaKnown RBP3.92□□□□□ -1.78
ZEB1-221ENST00000561061 UBE2BP63146 152 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 C10orf25Q5T742 122 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 Q6ZUT4 128 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 FAM231DQ6ZW35 169 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 ORAOV1Q8WV07 137 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 VAMP8Q9BV40 100 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 SNHG12Q9BXW3 62 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 NAT8BQ9UHF3 227 aa3.92□□□□□ -1.78
ZEB1-221ENST00000561061 F8WDY8 70 aa3.91□□□□□ -1.78
ZEB1-221ENST00000561061 NDUFA1O15239 70 aa3.91□□□□□ -1.78
ZEB1-221ENST00000561061 MIEN1Q9BRT3 115 aa3.91□□□□□ -1.78
ZEB1-221ENST00000561061 C6orf48Q9UBA6 75 aa3.91□□□□□ -1.78
ZEB1-221ENST00000561061 UBE2D4Q9Y2X8 147 aa3.91□□□□□ -1.78
ZEB1-221ENST00000561061 CSDC2Q9Y534 153 aaKnown RBP3.91□□□□□ -1.78
ZEB1-221ENST00000561061 A0A087X002 238 aa3.9□□□□□ -1.79
ZEB1-221ENST00000561061 KRTDAPP60985 99 aa3.9□□□□□ -1.79
ZEB1-221ENST00000561061 SMAGPQ0VAQ4 97 aa3.9□□□□□ -1.79
ZEB1-221ENST00000561061 GAGE2EQ4V326 116 aa3.9□□□□□ -1.79
ZEB1-221ENST00000561061 MRPL54Q6P161 138 aaKnown RBP3.9□□□□□ -1.79
ZEB1-221ENST00000561061 UNQ6190/PRO20217Q6UXQ8 127 aa3.9□□□□□ -1.79
ZEB1-221ENST00000561061 ATP5L2Q7Z4Y8 100 aa3.9□□□□□ -1.79
ZEB1-221ENST00000561061 GAGE2DQ9UEU5 116 aa3.9□□□□□ -1.79
ZEB1-221ENST00000561061 ZNF861PO60384 105 aa3.89□□□□□ -1.79
ZEB1-221ENST00000561061 IGKV2-30P06310 120 aa3.89□□□□□ -1.79
ZEB1-221ENST00000561061 FCER1GP30273 86 aa3.89□□□□□ -1.79
ZEB1-221ENST00000561061 KIAA1644Q3SXP7 199 aa3.89□□□□□ -1.79
ZEB1-221ENST00000561061 SPATA45Q537H7 98 aa3.89□□□□□ -1.79
ZEB1-221ENST00000561061 C18orf32Q8TCD1 76 aa3.89□□□□□ -1.79
ZEB1-221ENST00000561061 BORCS7Q96B45 105 aa3.89□□□□□ -1.79
ZEB1-221ENST00000561061 RETNLBQ9BQ08 111 aa3.89□□□□□ -1.79
ZEB1-221ENST00000561061 CRCT1Q9UGL9 99 aa3.89□□□□□ -1.79
ZEB1-221ENST00000561061 PAM16Q9Y3D7 125 aa3.89□□□□□ -1.79
ZEB1-221ENST00000561061 FSIP2Q5CZC0 6907 aa3.88□□□□□ -1.79
ZEB1-221ENST00000561061 IGHV3OR16-9A0A0B4J2B5 98 aa3.88□□□□□ -1.79
ZEB1-221ENST00000561061 A0A1B0GXF2 115 aa3.88□□□□□ -1.79
ZEB1-221ENST00000561061 SMKR1H3BMG3 65 aa3.88□□□□□ -1.79
ZEB1-221ENST00000561061 C3orf79P0CE67 100 aa3.88□□□□□ -1.79
ZEB1-221ENST00000561061 G0S2P27469 103 aa3.88□□□□□ -1.79
ZEB1-221ENST00000561061 PMCHL1Q16048 86 aa3.88□□□□□ -1.79
ZEB1-221ENST00000561061 TPRXLQ17RH7 258 aa3.88□□□□□ -1.79
ZEB1-221ENST00000561061 C9orf129Q5T035 196 aaKnown RBP3.88□□□□□ -1.79
ZEB1-221ENST00000561061 TYMSOSQ8TAI1 123 aa3.88□□□□□ -1.79
ZEB1-221ENST00000561061 FAM104AQ969W3 186 aa3.88□□□□□ -1.79
ZEB1-221ENST00000561061 TIMM21Q9BVV7 248 aa3.88□□□□□ -1.79
ZEB1-221ENST00000561061 TMEM191AQ9H0A3 160 aa3.88□□□□□ -1.79
ZEB1-221ENST00000561061 UQCR10Q9UDW1 63 aa3.88□□□□□ -1.79
ZEB1-221ENST00000561061 TRBV30A0A0K0K1B3 111 aa3.87□□□□□ -1.79
ZEB1-221ENST00000561061 C20orf202A1L168 122 aa3.87□□□□□ -1.79
ZEB1-221ENST00000561061 A8MWL6 223 aa3.87□□□□□ -1.79
ZEB1-221ENST00000561061 VCYO14598 125 aa3.87□□□□□ -1.79
ZEB1-221ENST00000561061 DLEU1O43261 78 aa3.87□□□□□ -1.79
ZEB1-221ENST00000561061 HSBP1O75506 76 aa3.87□□□□□ -1.79
ZEB1-221ENST00000561061 HBBP68871 147 aa3.87□□□□□ -1.79
ZEB1-221ENST00000561061 KIAA0087Q14695 138 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms