RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 DEFB136Q30KP8 78 aa11.02□□□□□ -0.65
PBX1-219ENST00000560641 IGHV4-31P0DP07 118 aa11.01□□□□□ -0.65
PBX1-219ENST00000560641 C6orf99Q4VX62 202 aa11.01□□□□□ -0.65
PBX1-219ENST00000560641 SORL1Q92673 2214 aa11.01□□□□□ -0.65
PBX1-219ENST00000560641 GIG44P09565 113 aaPredicted RBP11.01□□□□□ -0.65
PBX1-219ENST00000560641 LINC01356Q8N9X3 169 aa11□□□□□ -0.65
PBX1-219ENST00000560641 PTPRZ1P23471 2315 aaPredicted RBP11□□□□□ -0.65
PBX1-219ENST00000560641 MIFP14174 115 aa10.99□□□□□ -0.65
PBX1-219ENST00000560641 CMC4P56277 68 aaPredicted RBP10.99□□□□□ -0.65
PBX1-219ENST00000560641 PTPRQQ9UMZ3 2332 aa10.99□□□□□ -0.65
PBX1-219ENST00000560641 IGLV6-57P01721 117 aa10.98□□□□□ -0.65
PBX1-219ENST00000560641 Q8N3U1 123 aa10.98□□□□□ -0.65
PBX1-219ENST00000560641 M0R2N4 97 aa10.98□□□□□ -0.65
PBX1-219ENST00000560641 SNURFQ9Y675 71 aa10.98□□□□□ -0.65
PBX1-219ENST00000560641 PRR3P79522 188 aaKnown RBP10.97□□□□□ -0.65
PBX1-219ENST00000560641 TRGV2A0A075B6R0 118 aa10.96□□□□□ -0.65
PBX1-219ENST00000560641 IGKV3OR2-268A0A0C4DH90 116 aa10.96□□□□□ -0.65
PBX1-219ENST00000560641 TRGV4A0A0C4DH28 118 aa10.96□□□□□ -0.66
PBX1-219ENST00000560641 CSNK1G2-AS1Q8NCQ2 148 aa10.96□□□□□ -0.66
PBX1-219ENST00000560641 Q8NDZ9 215 aa10.96□□□□□ -0.66
PBX1-219ENST00000560641 TM2D3Q9BRN9 247 aa10.96□□□□□ -0.66
PBX1-219ENST00000560641 HAMPP81172 84 aa10.95□□□□□ -0.66
PBX1-219ENST00000560641 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
PBX1-219ENST00000560641 SPTAN1Q13813 2472 aaKnown RBP10.95□□□□□ -0.66
PBX1-219ENST00000560641 LINC00612Q8N6U2 182 aa10.95□□□□□ -0.66
PBX1-219ENST00000560641 RPL35AP18077 110 aaKnown RBP10.94□□□□□ -0.66
PBX1-219ENST00000560641 CD164L2Q6UWJ8 174 aa10.94□□□□□ -0.66
PBX1-219ENST00000560641 LAMTOR3Q9UHA4 124 aa10.94□□□□□ -0.66
PBX1-219ENST00000560641 NREPQ16612 68 aa10.94□□□□□ -0.66
PBX1-219ENST00000560641 SPATA3Q8NHX4 192 aa10.94□□□□□ -0.66
PBX1-219ENST00000560641 TMEM254Q8TBM7 123 aa10.94□□□□□ -0.66
PBX1-219ENST00000560641 CCL24O00175 119 aa10.93□□□□□ -0.66
PBX1-219ENST00000560641 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.93□□□□□ -0.66
PBX1-219ENST00000560641 ESM1Q9NQ30 184 aa10.93□□□□□ -0.66
PBX1-219ENST00000560641 C11orf68Q9H3H3 251 aaKnown RBP10.92□□□□□ -0.66
PBX1-219ENST00000560641 A0A0U1RQV1 116 aa10.92□□□□□ -0.66
PBX1-219ENST00000560641 LINC00474Q9P2X8 69 aa10.92□□□□□ -0.66
PBX1-219ENST00000560641 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.92□□□□□ -0.66
PBX1-219ENST00000560641 ZNF843Q8N446 348 aa10.92□□□□□ -0.66
PBX1-219ENST00000560641 A0A0J9YWU9 116 aa10.89□□□□□ -0.67
PBX1-219ENST00000560641 BPY2O14599 106 aa10.89□□□□□ -0.67
PBX1-219ENST00000560641 IGHV4-30-4P0DP06 118 aa10.89□□□□□ -0.67
PBX1-219ENST00000560641 CELA1Q9UNI1 258 aa10.89□□□□□ -0.67
PBX1-219ENST00000560641 CRYBG3Q68DQ2 2970 aa10.89□□□□□ -0.67
PBX1-219ENST00000560641 OCR1Q9BZK8 76 aa10.89□□□□□ -0.67
PBX1-219ENST00000560641 Q6ZQY7 126 aa10.88□□□□□ -0.67
PBX1-219ENST00000560641 WFDC11Q8NEX6 87 aa10.88□□□□□ -0.67
PBX1-219ENST00000560641 GVQW2A0A096LPI5 108 aaPredicted RBP10.87□□□□□ -0.67
PBX1-219ENST00000560641 Q6ZTC4 211 aa10.87□□□□□ -0.67
PBX1-219ENST00000560641 RNASE1P07998 156 aaKnown RBP10.86□□□□□ -0.67
PBX1-219ENST00000560641 PRYO14603 147 aa10.86□□□□□ -0.67
PBX1-219ENST00000560641 C19orf73Q9NVV2 129 aa10.86□□□□□ -0.67
PBX1-219ENST00000560641 COX7BP24311 80 aa10.86□□□□□ -0.67
PBX1-219ENST00000560641 HIVEP3Q5T1R4 2406 aa10.85□□□□□ -0.67
PBX1-219ENST00000560641 CR1P17927 2039 aa10.85□□□□□ -0.67
PBX1-219ENST00000560641 LCE6AA0A183 80 aa10.85□□□□□ -0.67
PBX1-219ENST00000560641 ESRGQ1W209 222 aa10.85□□□□□ -0.67
PBX1-219ENST00000560641 IGKV4-1P06312 121 aa10.84□□□□□ -0.67
PBX1-219ENST00000560641 C1orf195Q5TG92 126 aa10.84□□□□□ -0.67
PBX1-219ENST00000560641 FAM229BQ4G0N7 80 aa10.84□□□□□ -0.67
PBX1-219ENST00000560641 PKIGQ9Y2B9 76 aa10.84□□□□□ -0.67
PBX1-219ENST00000560641 ELOF1P60002 83 aaKnown RBP10.83□□□□□ -0.68
PBX1-219ENST00000560641 GNLYP22749 145 aa10.83□□□□□ -0.68
PBX1-219ENST00000560641 CHCHD10Q8WYQ3 142 aaPredicted RBP10.83□□□□□ -0.68
PBX1-219ENST00000560641 BRK1Q8WUW1 75 aa10.82□□□□□ -0.68
PBX1-219ENST00000560641 DIRC1Q969H9 104 aa10.82□□□□□ -0.68
PBX1-219ENST00000560641 SPTA1P02549 2419 aa10.82□□□□□ -0.68
PBX1-219ENST00000560641 V9GYY9 64 aa10.82□□□□□ -0.68
PBX1-219ENST00000560641 GVINP1Q7Z2Y8 2422 aa10.81□□□□□ -0.68
PBX1-219ENST00000560641 C9orf116Q5BN46 136 aaPredicted RBP10.81□□□□□ -0.68
PBX1-219ENST00000560641 AKAP9Q99996 3911 aa10.8□□□□□ -0.68
PBX1-219ENST00000560641 GYPEP15421 78 aa10.8□□□□□ -0.68
PBX1-219ENST00000560641 PRR15Q8IV56 129 aa10.8□□□□□ -0.68
PBX1-219ENST00000560641 LINC00269Q8N2A0 174 aa10.8□□□□□ -0.68
PBX1-219ENST00000560641 FUSP35637 526 aaKnown RBP eCLIP10.79□□□□□ -0.68
PBX1-219ENST00000560641 KHDC1LQ5JSQ8 128 aa10.79□□□□□ -0.68
PBX1-219ENST00000560641 NBPF19A0A087WUL8 3843 aa10.79□□□□□ -0.68
PBX1-219ENST00000560641 A0A1B0GW54 56 aa10.79□□□□□ -0.68
PBX1-219ENST00000560641 COL12A1Q99715 3063 aa10.78□□□□□ -0.68
PBX1-219ENST00000560641 PRO0255Q9UI72 69 aa10.77□□□□□ -0.68
PBX1-219ENST00000560641 Q1T7F1 81 aa10.77□□□□□ -0.69
PBX1-219ENST00000560641 LINC01006Q8NI28 216 aa10.77□□□□□ -0.69
PBX1-219ENST00000560641 ZNF73O43830 326 aaPredicted RBP10.76□□□□□ -0.69
PBX1-219ENST00000560641 REG3AQ06141 175 aa10.76□□□□□ -0.69
PBX1-219ENST00000560641 IGLV1-51P01701 117 aa10.76□□□□□ -0.69
PBX1-219ENST00000560641 C10orf25Q5T742 122 aa10.75□□□□□ -0.69
PBX1-219ENST00000560641 hDV103S1A0JD37 113 aa10.75□□□□□ -0.69
PBX1-219ENST00000560641 SEC61GP60059 68 aa10.74□□□□□ -0.69
PBX1-219ENST00000560641 CLPSL2Q6UWE3 100 aa10.74□□□□□ -0.69
PBX1-219ENST00000560641 SCXQ7RTU7 201 aa10.74□□□□□ -0.69
PBX1-219ENST00000560641 SPAG11BQ08648 103 aa10.74□□□□□ -0.69
PBX1-219ENST00000560641 UNQ6190/PRO20217Q6UXQ8 127 aa10.74□□□□□ -0.69
PBX1-219ENST00000560641 Q6ZRU5 148 aa10.74□□□□□ -0.69
PBX1-219ENST00000560641 AKAP6Q13023 2319 aa10.73□□□□□ -0.69
PBX1-219ENST00000560641 LINC00528Q8N1L1 170 aa10.72□□□□□ -0.69
PBX1-219ENST00000560641 BBC3Q96PG8 261 aaPredicted RBP10.72□□□□□ -0.69
PBX1-219ENST00000560641 CYSRT1A8MQ03 144 aa10.71□□□□□ -0.69
PBX1-219ENST00000560641 ZCCHC13Q8WW36 166 aaKnown RBP10.71□□□□□ -0.69
PBX1-219ENST00000560641 PRR34Q9NV39 138 aa10.71□□□□□ -0.7
PBX1-219ENST00000560641 CELSR2Q9HCU4 2923 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms