RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 RNASE13Q5GAN3 156 aaKnown RBP5.88□□□□□ -1.47
HERC1-209ENST00000560519 OR10D4PQ8NGN7 298 aa5.88□□□□□ -1.47
HERC1-209ENST00000560519 LPAP08519 4548 aa5.87□□□□□ -1.47
HERC1-209ENST00000560519 IGLV1-50A0A075B6I6 118 aa5.87□□□□□ -1.47
HERC1-209ENST00000560519 A0A1W2PNN7 141 aa5.87□□□□□ -1.47
HERC1-209ENST00000560519 A6NJY4 79 aa5.87□□□□□ -1.47
HERC1-209ENST00000560519 F8WDY8 70 aa5.87□□□□□ -1.47
HERC1-209ENST00000560519 H0Y9J4 135 aa5.87□□□□□ -1.47
HERC1-209ENST00000560519 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.87□□□□□ -1.47
HERC1-209ENST00000560519 IGLV7-43P04211 117 aa5.87□□□□□ -1.47
HERC1-209ENST00000560519 RPL13AP40429 203 aaKnown RBP5.87□□□□□ -1.47
HERC1-209ENST00000560519 UBE2D1P51668 147 aa5.87□□□□□ -1.47
HERC1-209ENST00000560519 SPAG11BQ08648 103 aa5.87□□□□□ -1.47
HERC1-209ENST00000560519 RNF151Q2KHN1 245 aa5.87□□□□□ -1.47
HERC1-209ENST00000560519 OPRPNQ99935 248 aaPredicted RBP5.87□□□□□ -1.47
HERC1-209ENST00000560519 HSBP1O75506 76 aa5.86□□□□□ -1.47
HERC1-209ENST00000560519 SEC11AP67812 179 aa5.86□□□□□ -1.47
HERC1-209ENST00000560519 PHF5AQ7RTV0 110 aaKnown RBP5.86□□□□□ -1.47
HERC1-209ENST00000560519 FAM104AQ969W3 186 aa5.86□□□□□ -1.47
HERC1-209ENST00000560519 URB1-AS1Q96HZ7 61 aa5.86□□□□□ -1.47
HERC1-209ENST00000560519 AMELXQ99217 191 aa5.86□□□□□ -1.47
HERC1-209ENST00000560519 MRPL35Q9NZE8 188 aaKnown RBP5.86□□□□□ -1.47
HERC1-209ENST00000560519 ATP5LO75964 103 aa5.85□□□□□ -1.47
HERC1-209ENST00000560519 PRR26Q8N8Z3 221 aa5.85□□□□□ -1.47
HERC1-209ENST00000560519 A0A087WZ39 114 aa5.84□□□□□ -1.47
HERC1-209ENST00000560519 NDUFA1O15239 70 aa5.84□□□□□ -1.47
HERC1-209ENST00000560519 PMVKQ15126 192 aa5.84□□□□□ -1.47
HERC1-209ENST00000560519 A0A096LNJ9 63 aa5.83□□□□□ -1.48
HERC1-209ENST00000560519 SERF1AO75920 110 aa5.83□□□□□ -1.48
HERC1-209ENST00000560519 TLX1NBP0CAT3 122 aa5.83□□□□□ -1.48
HERC1-209ENST00000560519 HERVK_113P63121 156 aa5.83□□□□□ -1.48
HERC1-209ENST00000560519 PMCHL1Q16048 86 aa5.83□□□□□ -1.48
HERC1-209ENST00000560519 PRR4Q16378 134 aa5.83□□□□□ -1.48
HERC1-209ENST00000560519 PDZD11Q5EBL8 140 aa5.83□□□□□ -1.48
HERC1-209ENST00000560519 LINC00242Q5T6M2 205 aa5.83□□□□□ -1.48
HERC1-209ENST00000560519 LINC00173Q6ZV60 143 aa5.83□□□□□ -1.48
HERC1-209ENST00000560519 C5orf38Q86SI9 138 aa5.83□□□□□ -1.48
HERC1-209ENST00000560519 ORAOV1Q8WV07 137 aa5.83□□□□□ -1.48
HERC1-209ENST00000560519 GEMIN7Q9H840 131 aaKnown RBP5.83□□□□□ -1.48
HERC1-209ENST00000560519 IGHV3OR16-9A0A0B4J2B5 98 aa5.82□□□□□ -1.48
HERC1-209ENST00000560519 HIST1H2BKO60814 126 aa5.82□□□□□ -1.48
HERC1-209ENST00000560519 HIST1H2BJP06899 126 aa5.82□□□□□ -1.48
HERC1-209ENST00000560519 HIST1H2BOP23527 126 aa5.82□□□□□ -1.48
HERC1-209ENST00000560519 HIST1H2BBP33778 126 aa5.82□□□□□ -1.48
HERC1-209ENST00000560519 HIST1H2BDP58876 126 aa5.82□□□□□ -1.48
HERC1-209ENST00000560519 HIST1H2BCP62807 126 aa5.82□□□□□ -1.48
HERC1-209ENST00000560519 UBE2BP63146 152 aa5.82□□□□□ -1.48
HERC1-209ENST00000560519 HIST2H2BEQ16778 126 aa5.82□□□□□ -1.48
HERC1-209ENST00000560519 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.82□□□□□ -1.48
HERC1-209ENST00000560519 FAM19A3Q7Z5A8 133 aa5.82□□□□□ -1.48
HERC1-209ENST00000560519 HIST1H2BHQ93079 126 aa5.82□□□□□ -1.48
HERC1-209ENST00000560519 HIST1H2BNQ99877 126 aa5.82□□□□□ -1.48
HERC1-209ENST00000560519 HIST1H2BMQ99879 126 aa5.82□□□□□ -1.48
HERC1-209ENST00000560519 CST9LQ9H4G1 147 aa5.82□□□□□ -1.48
HERC1-209ENST00000560519 TINCRA0A1B0GVN0 87 aa5.81□□□□□ -1.48
HERC1-209ENST00000560519 M0QXV9 152 aa5.81□□□□□ -1.48
HERC1-209ENST00000560519 NDUFA6P56556 154 aa5.81□□□□□ -1.48
HERC1-209ENST00000560519 ZC2HC1BQ5TFG8 222 aa5.81□□□□□ -1.48
HERC1-209ENST00000560519 FAM19A5Q7Z5A7 132 aaPredicted RBP5.81□□□□□ -1.48
HERC1-209ENST00000560519 LINC01561Q8N1V8 128 aa5.81□□□□□ -1.48
HERC1-209ENST00000560519 LEPROTL1O95214 131 aa5.8□□□□□ -1.48
HERC1-209ENST00000560519 FAM19A2Q8N3H0 131 aa5.8□□□□□ -1.48
HERC1-209ENST00000560519 IFI27L1Q96BM0 104 aa5.8□□□□□ -1.48
HERC1-209ENST00000560519 PACRGQ96M98 296 aaPredicted RBP5.8□□□□□ -1.48
HERC1-209ENST00000560519 HSPB8Q9UJY1 196 aa5.8□□□□□ -1.48
HERC1-209ENST00000560519 H3BRM9 83 aa5.79□□□□□ -1.48
HERC1-209ENST00000560519 KRTAP1-4P0C5Y4 121 aa5.79□□□□□ -1.48
HERC1-209ENST00000560519 LINC00310P59036 64 aa5.79□□□□□ -1.48
HERC1-209ENST00000560519 LINC00469Q8N7U9 141 aa5.79□□□□□ -1.48
HERC1-209ENST00000560519 TRAV12-1A0A0B4J245 112 aa5.78□□□□□ -1.48
HERC1-209ENST00000560519 FAM168BA1KXE4 195 aa5.78□□□□□ -1.48
HERC1-209ENST00000560519 IGLC3P0DOY3 106 aa5.78□□□□□ -1.48
HERC1-209ENST00000560519 COA6Q5JTJ3 125 aaKnown RBP5.78□□□□□ -1.48
HERC1-209ENST00000560519 CDKN2A-AS1Q9UH64 79 aa5.78□□□□□ -1.48
HERC1-209ENST00000560519 IGLV5-45A0A087WSX0 123 aa5.77□□□□□ -1.49
HERC1-209ENST00000560519 TRBV30A0A0K0K1B3 111 aa5.77□□□□□ -1.49
HERC1-209ENST00000560519 NDUFC2-KCTD14E9PQ53 114 aa5.77□□□□□ -1.49
HERC1-209ENST00000560519 NUPR1O60356 82 aa5.77□□□□□ -1.49
HERC1-209ENST00000560519 PRSS2P07478 247 aa5.77□□□□□ -1.49
HERC1-209ENST00000560519 GAGE2EQ4V326 116 aa5.77□□□□□ -1.49
HERC1-209ENST00000560519 KRTAP9-2Q9BYQ4 174 aa5.77□□□□□ -1.49
HERC1-209ENST00000560519 C6orf48Q9UBA6 75 aa5.77□□□□□ -1.49
HERC1-209ENST00000560519 GAGE2DQ9UEU5 116 aa5.77□□□□□ -1.49
HERC1-209ENST00000560519 CHTOPQ9Y3Y2 248 aaKnown RBP5.77□□□□□ -1.49
HERC1-209ENST00000560519 FABP4P15090 132 aa5.76□□□□□ -1.49
HERC1-209ENST00000560519 MAP1LC3CQ9BXW4 147 aa5.76□□□□□ -1.49
HERC1-209ENST00000560519 MUC2Q02817 5179 aa5.75□□□□□ -1.49
HERC1-209ENST00000560519 F8VRH5 84 aa5.75□□□□□ -1.49
HERC1-209ENST00000560519 CKS1BP61024 79 aa5.75□□□□□ -1.49
HERC1-209ENST00000560519 C6orf226Q5I0X4 101 aa5.75□□□□□ -1.49
HERC1-209ENST00000560519 C10orf25Q5T742 122 aa5.75□□□□□ -1.49
HERC1-209ENST00000560519 UNQ6190/PRO20217Q6UXQ8 127 aa5.75□□□□□ -1.49
HERC1-209ENST00000560519 KRTAP11-1Q8IUC1 163 aa5.75□□□□□ -1.49
HERC1-209ENST00000560519 Q8IZM0 81 aa5.75□□□□□ -1.49
HERC1-209ENST00000560519 TOMM7Q9P0U1 55 aa5.75□□□□□ -1.49
HERC1-209ENST00000560519 SMIM1B2RUZ4 78 aa5.74□□□□□ -1.49
HERC1-209ENST00000560519 H0Y8G0 127 aa5.74□□□□□ -1.49
HERC1-209ENST00000560519 ZNF861PO60384 105 aa5.74□□□□□ -1.49
HERC1-209ENST00000560519 ZNF22P17026 224 aaPredicted RBP5.74□□□□□ -1.49
HERC1-209ENST00000560519 CXCL5P42830 114 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms