RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 LOC107984640A0A0U1RRK4 108 aa5.13□□□□□ -1.59
LRRC28-219ENST00000560483 C9orf118A6NHY6 69 aa5.13□□□□□ -1.59
LRRC28-219ENST00000560483 TRGC2P03986 189 aa5.13□□□□□ -1.59
LRRC28-219ENST00000560483 NPSP0C0P6 89 aa5.13□□□□□ -1.59
LRRC28-219ENST00000560483 INAFM2P0DMQ5 153 aa5.13□□□□□ -1.59
LRRC28-219ENST00000560483 Q6ZRU5 148 aa5.13□□□□□ -1.59
LRRC28-219ENST00000560483 Q6ZSA8 131 aa5.13□□□□□ -1.59
LRRC28-219ENST00000560483 STPG4Q8N801 248 aa5.13□□□□□ -1.59
LRRC28-219ENST00000560483 FAM104AQ969W3 186 aa5.13□□□□□ -1.59
LRRC28-219ENST00000560483 C2orf48Q96LS8 159 aa5.13□□□□□ -1.59
LRRC28-219ENST00000560483 AMELXQ99217 191 aa5.13□□□□□ -1.59
LRRC28-219ENST00000560483 ABCA13Q86UQ4 5058 aa5.12□□□□□ -1.59
LRRC28-219ENST00000560483 A0A087WZ39 114 aa5.12□□□□□ -1.59
LRRC28-219ENST00000560483 A0A096LNI7 61 aa5.12□□□□□ -1.59
LRRC28-219ENST00000560483 HSBP1O75506 76 aa5.12□□□□□ -1.59
LRRC28-219ENST00000560483 PMVKQ15126 192 aa5.12□□□□□ -1.59
LRRC28-219ENST00000560483 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
LRRC28-219ENST00000560483 C6orf226Q5I0X4 101 aa5.12□□□□□ -1.59
LRRC28-219ENST00000560483 LINC00173Q6ZV60 143 aa5.12□□□□□ -1.59
LRRC28-219ENST00000560483 C7orf33Q8WU49 177 aa5.12□□□□□ -1.59
LRRC28-219ENST00000560483 LINC00474Q9P2X8 69 aa5.12□□□□□ -1.59
LRRC28-219ENST00000560483 A0A087WYN8 130 aa5.11□□□□□ -1.59
LRRC28-219ENST00000560483 H0Y8G0 127 aa5.11□□□□□ -1.59
LRRC28-219ENST00000560483 H3BRM9 83 aa5.11□□□□□ -1.59
LRRC28-219ENST00000560483 PANO1I0J062 215 aa5.11□□□□□ -1.59
LRRC28-219ENST00000560483 ATP5LO75964 103 aa5.11□□□□□ -1.59
LRRC28-219ENST00000560483 RPL37AP61513 92 aaKnown RBP5.11□□□□□ -1.59
LRRC28-219ENST00000560483 GAGE2EQ4V326 116 aa5.11□□□□□ -1.59
LRRC28-219ENST00000560483 CST9LQ9H4G1 147 aa5.11□□□□□ -1.59
LRRC28-219ENST00000560483 GAGE2DQ9UEU5 116 aa5.11□□□□□ -1.59
LRRC28-219ENST00000560483 CDKN2A-AS1Q9UH64 79 aa5.11□□□□□ -1.59
LRRC28-219ENST00000560483 FAT1Q14517 4588 aa5.11□□□□□ -1.59
LRRC28-219ENST00000560483 PCLOQ9Y6V0 5065 aa5.11□□□□□ -1.59
LRRC28-219ENST00000560483 LINC01546A6NGU7 62 aa5.1□□□□□ -1.59
LRRC28-219ENST00000560483 SCO1O75880 301 aa5.1□□□□□ -1.59
LRRC28-219ENST00000560483 SPINK8P0C7L1 97 aa5.1□□□□□ -1.59
LRRC28-219ENST00000560483 C2orf82Q6UX34 121 aa5.1□□□□□ -1.59
LRRC28-219ENST00000560483 UNQ6190/PRO20217Q6UXQ8 127 aa5.1□□□□□ -1.59
LRRC28-219ENST00000560483 SPACA4Q8TDM5 124 aa5.1□□□□□ -1.59
LRRC28-219ENST00000560483 CHCHD1Q96BP2 118 aaKnown RBP5.1□□□□□ -1.59
LRRC28-219ENST00000560483 TINCRA0A1B0GVN0 87 aa5.09□□□□□ -1.59
LRRC28-219ENST00000560483 F8WDY8 70 aa5.09□□□□□ -1.59
LRRC28-219ENST00000560483 PTTG1IPP53801 180 aa5.09□□□□□ -1.59
LRRC28-219ENST00000560483 TMEM170BQ5T4T1 132 aa5.09□□□□□ -1.59
LRRC28-219ENST00000560483 FAM19A2Q8N3H0 131 aa5.09□□□□□ -1.59
LRRC28-219ENST00000560483 YPEL4Q96NS1 127 aa5.09□□□□□ -1.59
LRRC28-219ENST00000560483 MRPL35Q9NZE8 188 aaKnown RBP5.09□□□□□ -1.59
LRRC28-219ENST00000560483 C10orf25Q5T742 122 aa5.08□□□□□ -1.6
LRRC28-219ENST00000560483 LINC01561Q8N1V8 128 aa5.08□□□□□ -1.6
LRRC28-219ENST00000560483 COX7B2Q8TF08 81 aa5.08□□□□□ -1.6
LRRC28-219ENST00000560483 URB1-AS1Q96HZ7 61 aa5.08□□□□□ -1.6
LRRC28-219ENST00000560483 C6orf48Q9UBA6 75 aa5.08□□□□□ -1.6
LRRC28-219ENST00000560483 CHTOPQ9Y3Y2 248 aaKnown RBP5.08□□□□□ -1.6
LRRC28-219ENST00000560483 TRBV30A0A0K0K1B3 111 aa5.07□□□□□ -1.6
LRRC28-219ENST00000560483 COLCA2A8K830 154 aa5.07□□□□□ -1.6
LRRC28-219ENST00000560483 FABP4P15090 132 aa5.07□□□□□ -1.6
LRRC28-219ENST00000560483 RNF151Q2KHN1 245 aa5.07□□□□□ -1.6
LRRC28-219ENST00000560483 C9orf116Q5BN46 136 aaPredicted RBP5.07□□□□□ -1.6
LRRC28-219ENST00000560483 PDZD11Q5EBL8 140 aa5.07□□□□□ -1.6
LRRC28-219ENST00000560483 FAM19A5Q7Z5A7 132 aaPredicted RBP5.07□□□□□ -1.6
LRRC28-219ENST00000560483 Q8IZM0 81 aa5.07□□□□□ -1.6
LRRC28-219ENST00000560483 IFI27L1Q96BM0 104 aa5.07□□□□□ -1.6
LRRC28-219ENST00000560483 A0A096LNJ9 63 aa5.06□□□□□ -1.6
LRRC28-219ENST00000560483 SERF1AO75920 110 aa5.06□□□□□ -1.6
LRRC28-219ENST00000560483 LEPROTL1O95214 131 aa5.06□□□□□ -1.6
LRRC28-219ENST00000560483 CXCL5P42830 114 aa5.06□□□□□ -1.6
LRRC28-219ENST00000560483 FAM19A3Q7Z5A8 133 aa5.06□□□□□ -1.6
LRRC28-219ENST00000560483 PLAC8Q9NZF1 115 aa5.06□□□□□ -1.6
LRRC28-219ENST00000560483 VPS13BQ7Z7G8 4022 aa5.06□□□□□ -1.6
LRRC28-219ENST00000560483 SMIM1B2RUZ4 78 aa5.05□□□□□ -1.6
LRRC28-219ENST00000560483 NDUFC2-KCTD14E9PQ53 114 aa5.05□□□□□ -1.6
LRRC28-219ENST00000560483 F8VRH5 84 aa5.05□□□□□ -1.6
LRRC28-219ENST00000560483 IGLC3P0DOY3 106 aa5.05□□□□□ -1.6
LRRC28-219ENST00000560483 UBE2BP63146 152 aa5.05□□□□□ -1.6
LRRC28-219ENST00000560483 CIRBPQ14011 172 aaKnown RBP5.05□□□□□ -1.6
LRRC28-219ENST00000560483 KIAA0087Q14695 138 aa5.05□□□□□ -1.6
LRRC28-219ENST00000560483 PET117Q6UWS5 81 aa5.05□□□□□ -1.6
LRRC28-219ENST00000560483 CDIP1Q9H305 208 aa5.05□□□□□ -1.6
LRRC28-219ENST00000560483 HSPB8Q9UJY1 196 aa5.05□□□□□ -1.6
LRRC28-219ENST00000560483 C11orf86A6NJI1 115 aa5.04□□□□□ -1.6
LRRC28-219ENST00000560483 ZNF22P17026 224 aaPredicted RBP5.04□□□□□ -1.6
LRRC28-219ENST00000560483 Q6ZRP5 223 aa5.04□□□□□ -1.6
LRRC28-219ENST00000560483 SRRM2Q9UQ35 2752 aaKnown RBP5.03□□□□□ -1.6
LRRC28-219ENST00000560483 FLG2Q5D862 2391 aaPredicted RBP5.03□□□□□ -1.6
LRRC28-219ENST00000560483 IGLV5-45A0A087WSX0 123 aa5.03□□□□□ -1.6
LRRC28-219ENST00000560483 FAM168BA1KXE4 195 aa5.03□□□□□ -1.6
LRRC28-219ENST00000560483 ATP6V1G1O75348 118 aa5.03□□□□□ -1.6
LRRC28-219ENST00000560483 PFN2P35080 140 aa5.03□□□□□ -1.6
LRRC28-219ENST00000560483 PHF5AQ7RTV0 110 aaKnown RBP5.03□□□□□ -1.6
LRRC28-219ENST00000560483 ZNF625Q96I27 306 aaPredicted RBP5.03□□□□□ -1.6
LRRC28-219ENST00000560483 MAP1LC3CQ9BXW4 147 aa5.03□□□□□ -1.6
LRRC28-219ENST00000560483 XAGE1AQ9HD64 81 aa5.03□□□□□ -1.6
LRRC28-219ENST00000560483 TRAV12-1A0A0B4J245 112 aa5.02□□□□□ -1.61
LRRC28-219ENST00000560483 A0A1W2PNN7 141 aa5.02□□□□□ -1.61
LRRC28-219ENST00000560483 M0QXV9 152 aa5.02□□□□□ -1.61
LRRC28-219ENST00000560483 TLX1NBP0CAT3 122 aa5.02□□□□□ -1.61
LRRC28-219ENST00000560483 HIST1H2BKO60814 126 aa5.01□□□□□ -1.61
LRRC28-219ENST00000560483 HIST1H2BJP06899 126 aa5.01□□□□□ -1.61
LRRC28-219ENST00000560483 S100A1P23297 94 aa5.01□□□□□ -1.61
LRRC28-219ENST00000560483 HIST1H2BOP23527 126 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms