RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 Q6ZVH6 145 aa5.73□□□□□ -1.49
TRAF3-209ENST00000560463 KRTAP1-5Q9BYS1 174 aa5.73□□□□□ -1.49
TRAF3-209ENST00000560463 TP73-AS1Q9UF72 201 aa5.73□□□□□ -1.49
TRAF3-209ENST00000560463 KMT2AQ03164 3969 aa5.73□□□□□ -1.49
TRAF3-209ENST00000560463 DNAH10Q8IVF4 4471 aa5.73□□□□□ -1.49
TRAF3-209ENST00000560463 ZNF561-AS1K7EIQ3 104 aa5.72□□□□□ -1.49
TRAF3-209ENST00000560463 M0R143 59 aa5.72□□□□□ -1.49
TRAF3-209ENST00000560463 SPAG11BQ08648 103 aa5.72□□□□□ -1.49
TRAF3-209ENST00000560463 HSD52Q0P140 79 aa5.72□□□□□ -1.49
TRAF3-209ENST00000560463 GVQW2A0A096LPI5 108 aaPredicted RBP5.71□□□□□ -1.5
TRAF3-209ENST00000560463 GCSHP23434 173 aa5.71□□□□□ -1.5
TRAF3-209ENST00000560463 SRSF9Q13242 221 aaKnown RBP eCLIP5.71□□□□□ -1.5
TRAF3-209ENST00000560463 COX17Q14061 63 aa5.71□□□□□ -1.5
TRAF3-209ENST00000560463 C15orf56Q8N910 161 aa5.71□□□□□ -1.5
TRAF3-209ENST00000560463 LINC00476Q8WZB0 136 aa5.71□□□□□ -1.5
TRAF3-209ENST00000560463 C2orf48Q96LS8 159 aa5.71□□□□□ -1.5
TRAF3-209ENST00000560463 HIST1H4GQ99525 98 aa5.71□□□□□ -1.5
TRAF3-209ENST00000560463 PSCAO43653 123 aa5.7□□□□□ -1.5
TRAF3-209ENST00000560463 MEIG1Q5JSS6 88 aa5.7□□□□□ -1.5
TRAF3-209ENST00000560463 NTN5Q8WTR8 489 aaPredicted RBP5.7□□□□□ -1.5
TRAF3-209ENST00000560463 COPS9Q8WXC6 57 aa5.7□□□□□ -1.5
TRAF3-209ENST00000560463 SPANXDQ9BXN6 97 aa5.7□□□□□ -1.5
TRAF3-209ENST00000560463 SPANXCQ9NY87 97 aa5.7□□□□□ -1.5
TRAF3-209ENST00000560463 DNAH2Q9P225 4427 aa5.69□□□□□ -1.5
TRAF3-209ENST00000560463 TRBV30A0A0K0K1B3 111 aa5.69□□□□□ -1.5
TRAF3-209ENST00000560463 LY6G6CO95867 125 aa5.69□□□□□ -1.5
TRAF3-209ENST00000560463 IFITM1P13164 125 aa5.69□□□□□ -1.5
TRAF3-209ENST00000560463 C14orf177Q52M58 125 aa5.69□□□□□ -1.5
TRAF3-209ENST00000560463 C4orf48Q5BLP8 95 aa5.69□□□□□ -1.5
TRAF3-209ENST00000560463 C2orf82Q6UX34 121 aa5.69□□□□□ -1.5
TRAF3-209ENST00000560463 Q6ZR54 194 aa5.69□□□□□ -1.5
TRAF3-209ENST00000560463 CEND1Q8N111 149 aa5.69□□□□□ -1.5
TRAF3-209ENST00000560463 LITAFQ99732 161 aa5.69□□□□□ -1.5
TRAF3-209ENST00000560463 PPDPFQ9H3Y8 114 aa5.69□□□□□ -1.5
TRAF3-209ENST00000560463 TMEM238LA0A1B0GVL6 79 aa5.68□□□□□ -1.5
TRAF3-209ENST00000560463 A6NJY4 79 aa5.68□□□□□ -1.5
TRAF3-209ENST00000560463 USP17L23D6RBM5 183 aa5.68□□□□□ -1.5
TRAF3-209ENST00000560463 SMIM13P0DJ93 91 aa5.68□□□□□ -1.5
TRAF3-209ENST00000560463 HINT1P49773 126 aaPredicted RBP5.68□□□□□ -1.5
TRAF3-209ENST00000560463 PTTG1IPP53801 180 aa5.68□□□□□ -1.5
TRAF3-209ENST00000560463 LBHQ53QV2 105 aaPredicted RBP5.68□□□□□ -1.5
TRAF3-209ENST00000560463 BVES-AS1Q5T3Y7 98 aa5.68□□□□□ -1.5
TRAF3-209ENST00000560463 CAMK2N2Q96S95 79 aa5.68□□□□□ -1.5
TRAF3-209ENST00000560463 ERG28Q9UKR5 140 aa5.68□□□□□ -1.5
TRAF3-209ENST00000560463 FRAS1Q86XX4 4008 aa5.67□□□□□ -1.5
TRAF3-209ENST00000560463 A6NDN8 102 aa5.67□□□□□ -1.5
TRAF3-209ENST00000560463 LINC00158P58513 81 aa5.67□□□□□ -1.5
TRAF3-209ENST00000560463 RPL24P83731 157 aaKnown RBP5.67□□□□□ -1.5
TRAF3-209ENST00000560463 RNF151Q2KHN1 245 aa5.67□□□□□ -1.5
TRAF3-209ENST00000560463 HIGD2BQ4VC39 106 aa5.67□□□□□ -1.5
TRAF3-209ENST00000560463 ADAMTSL4-AS1Q5T5F5 129 aa5.67□□□□□ -1.5
TRAF3-209ENST00000560463 UNQ6190/PRO20217Q6UXQ8 127 aa5.67□□□□□ -1.5
TRAF3-209ENST00000560463 C6orf223Q8N319 242 aa5.67□□□□□ -1.5
TRAF3-209ENST00000560463 M0R2N4 97 aa5.66□□□□□ -1.5
TRAF3-209ENST00000560463 SYCNQ0VAF6 134 aa5.66□□□□□ -1.5
TRAF3-209ENST00000560463 Q6ZRN7 208 aaPredicted RBP5.66□□□□□ -1.5
TRAF3-209ENST00000560463 MUSTN1Q8IVN3 82 aa5.66□□□□□ -1.5
TRAF3-209ENST00000560463 LINC00526Q96FQ7 95 aa5.66□□□□□ -1.5
TRAF3-209ENST00000560463 SNHG12Q9BXW3 62 aa5.66□□□□□ -1.5
TRAF3-209ENST00000560463 LOC107984156A0A0G2JMH3 177 aa5.65□□□□□ -1.5
TRAF3-209ENST00000560463 PFN2P35080 140 aa5.65□□□□□ -1.5
TRAF3-209ENST00000560463 C10orf25Q5T742 122 aa5.65□□□□□ -1.5
TRAF3-209ENST00000560463 C1orf134Q5TEV5 83 aa5.65□□□□□ -1.5
TRAF3-209ENST00000560463 Q6ZRU5 148 aa5.65□□□□□ -1.5
TRAF3-209ENST00000560463 ARL17AQ8IVW1 177 aa5.65□□□□□ -1.5
TRAF3-209ENST00000560463 MIR7-3HGQ8N6C7 128 aa5.65□□□□□ -1.5
TRAF3-209ENST00000560463 LINC00308Q8TCZ7 52 aa5.65□□□□□ -1.5
TRAF3-209ENST00000560463 DNAH17Q9UFH2 4485 aa5.65□□□□□ -1.51
TRAF3-209ENST00000560463 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.64□□□□□ -1.51
TRAF3-209ENST00000560463 A0A0U1RRA0 63 aa5.64□□□□□ -1.51
TRAF3-209ENST00000560463 FXYD2P54710 66 aa5.64□□□□□ -1.51
TRAF3-209ENST00000560463 CNBPP62633 177 aaKnown RBP5.64□□□□□ -1.51
TRAF3-209ENST00000560463 BATFQ16520 125 aa5.64□□□□□ -1.51
TRAF3-209ENST00000560463 DAND5Q8N907 189 aa5.64□□□□□ -1.51
TRAF3-209ENST00000560463 CARD19Q96LW7 228 aa5.64□□□□□ -1.51
TRAF3-209ENST00000560463 C6orf48Q9UBA6 75 aa5.64□□□□□ -1.51
TRAF3-209ENST00000560463 HECTD4Q9Y4D8 3996 aa5.64□□□□□ -1.51
TRAF3-209ENST00000560463 LRCOL1A6NCL2 159 aa5.63□□□□□ -1.51
TRAF3-209ENST00000560463 NDUFC2-KCTD14E9PQ53 114 aa5.63□□□□□ -1.51
TRAF3-209ENST00000560463 EREGO14944 169 aa5.63□□□□□ -1.51
TRAF3-209ENST00000560463 TLX1NBP0CAT3 122 aa5.63□□□□□ -1.51
TRAF3-209ENST00000560463 C9orf116Q5BN46 136 aaPredicted RBP5.63□□□□□ -1.51
TRAF3-209ENST00000560463 COL5A1-AS1Q5SY13 56 aa5.63□□□□□ -1.51
TRAF3-209ENST00000560463 PKIGQ9Y2B9 76 aa5.63□□□□□ -1.51
TRAF3-209ENST00000560463 A0A1B0GWB2 263 aa5.62□□□□□ -1.51
TRAF3-209ENST00000560463 A4D1N5 150 aa5.62□□□□□ -1.51
TRAF3-209ENST00000560463 LECT2O14960 151 aa5.62□□□□□ -1.51
TRAF3-209ENST00000560463 NPC2P61916 151 aa5.62□□□□□ -1.51
TRAF3-209ENST00000560463 NHP2Q9NX24 153 aaKnown RBP5.62□□□□□ -1.51
TRAF3-209ENST00000560463 SACSQ9NZJ4 4579 aa5.62□□□□□ -1.51
TRAF3-209ENST00000560463 A0A0B4J2C4 111 aa5.61□□□□□ -1.51
TRAF3-209ENST00000560463 NDUFC2O95298 119 aa5.61□□□□□ -1.51
TRAF3-209ENST00000560463 SLPIP03973 132 aa5.61□□□□□ -1.51
TRAF3-209ENST00000560463 WFDC2Q14508 124 aa5.61□□□□□ -1.51
TRAF3-209ENST00000560463 SOSTDC1Q6X4U4 206 aa5.61□□□□□ -1.51
TRAF3-209ENST00000560463 SND1-IT1Q9HBX3 110 aa5.61□□□□□ -1.51
TRAF3-209ENST00000560463 A0A087WTM6 91 aa5.6□□□□□ -1.51
TRAF3-209ENST00000560463 LOC107984640A0A0U1RRK4 108 aa5.6□□□□□ -1.51
TRAF3-209ENST00000560463 CFC1BP0CG36 223 aa5.6□□□□□ -1.51
TRAF3-209ENST00000560463 CFC1P0CG37 223 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms