RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 H3BNG1 76 aa6.72□□□□□ -1.33
RTF1-206ENST00000560447 H7C2G1 150 aa6.72□□□□□ -1.33
RTF1-206ENST00000560447 COX7A2LO14548 114 aa6.71□□□□□ -1.34
RTF1-206ENST00000560447 IGHV4-30-4P0DP06 118 aa6.71□□□□□ -1.34
RTF1-206ENST00000560447 LELP1Q5T871 98 aa6.71□□□□□ -1.34
RTF1-206ENST00000560447 CD164L2Q6UWJ8 174 aa6.71□□□□□ -1.34
RTF1-206ENST00000560447 SOSTDC1Q6X4U4 206 aa6.71□□□□□ -1.34
RTF1-206ENST00000560447 SPATA3Q8NHX4 192 aa6.71□□□□□ -1.34
RTF1-206ENST00000560447 SIGMAR1Q99720 223 aa6.71□□□□□ -1.34
RTF1-206ENST00000560447 FN1P02751 2386 aaKnown RBP6.71□□□□□ -1.34
RTF1-206ENST00000560447 TRACP01848 142 aa6.7□□□□□ -1.34
RTF1-206ENST00000560447 CRPP02741 224 aa6.7□□□□□ -1.34
RTF1-206ENST00000560447 RPL28P46779 137 aaKnown RBP6.7□□□□□ -1.34
RTF1-206ENST00000560447 NPC2P61916 151 aa6.7□□□□□ -1.34
RTF1-206ENST00000560447 EGFEM1PQ0D2K5 195 aa6.7□□□□□ -1.34
RTF1-206ENST00000560447 COX17Q14061 63 aa6.7□□□□□ -1.34
RTF1-206ENST00000560447 MTURNQ8N3F0 131 aa6.7□□□□□ -1.34
RTF1-206ENST00000560447 NOTCH2Q04721 2471 aa6.7□□□□□ -1.34
RTF1-206ENST00000560447 C6orf226Q5I0X4 101 aa6.69□□□□□ -1.34
RTF1-206ENST00000560447 MIR7-3HGQ8N6C7 128 aa6.69□□□□□ -1.34
RTF1-206ENST00000560447 DAND5Q8N907 189 aa6.69□□□□□ -1.34
RTF1-206ENST00000560447 TOMM7Q9P0U1 55 aa6.69□□□□□ -1.34
RTF1-206ENST00000560447 HECTD1Q9ULT8 2610 aa6.69□□□□□ -1.34
RTF1-206ENST00000560447 IGKV3OR2-268A0A0C4DH90 116 aa6.68□□□□□ -1.34
RTF1-206ENST00000560447 LINC00158P58513 81 aa6.68□□□□□ -1.34
RTF1-206ENST00000560447 DEFB121Q5J5C9 76 aa6.68□□□□□ -1.34
RTF1-206ENST00000560447 C5orf38Q86SI9 138 aa6.68□□□□□ -1.34
RTF1-206ENST00000560447 C11orf68Q9H3H3 251 aaKnown RBP6.68□□□□□ -1.34
RTF1-206ENST00000560447 SND1-IT1Q9HBX3 110 aa6.68□□□□□ -1.34
RTF1-206ENST00000560447 NIPBLQ6KC79 2804 aaeCLIP6.68□□□□□ -1.34
RTF1-206ENST00000560447 H0YGX0 51 aa6.67□□□□□ -1.34
RTF1-206ENST00000560447 REG3AQ06141 175 aa6.67□□□□□ -1.34
RTF1-206ENST00000560447 C2orf82Q6UX34 121 aa6.67□□□□□ -1.34
RTF1-206ENST00000560447 UBE2WQ96B02 151 aa6.67□□□□□ -1.34
RTF1-206ENST00000560447 CELA1Q9UNI1 258 aa6.67□□□□□ -1.34
RTF1-206ENST00000560447 NDUFC2O95298 119 aa6.66□□□□□ -1.34
RTF1-206ENST00000560447 XCL1P47992 114 aa6.66□□□□□ -1.34
RTF1-206ENST00000560447 LCE1DQ5T752 114 aa6.66□□□□□ -1.34
RTF1-206ENST00000560447 CFAP161Q6P656 301 aa6.66□□□□□ -1.34
RTF1-206ENST00000560447 NTN5Q8WTR8 489 aaPredicted RBP6.66□□□□□ -1.34
RTF1-206ENST00000560447 CHCHD10Q8WYQ3 142 aaPredicted RBP6.66□□□□□ -1.34
RTF1-206ENST00000560447 PRR34Q9NV39 138 aa6.66□□□□□ -1.34
RTF1-206ENST00000560447 KLK5Q9Y337 293 aaPredicted RBP6.66□□□□□ -1.34
RTF1-206ENST00000560447 HIVEP1P15822 2718 aa6.65□□□□□ -1.34
RTF1-206ENST00000560447 A0A096LPF7 62 aa6.65□□□□□ -1.34
RTF1-206ENST00000560447 TRAV8-4A0A0B4J246 113 aa6.65□□□□□ -1.34
RTF1-206ENST00000560447 A0A0U1RRA0 63 aa6.65□□□□□ -1.34
RTF1-206ENST00000560447 FAM240AA0A1B0GVK7 77 aa6.65□□□□□ -1.34
RTF1-206ENST00000560447 ANGP03950 147 aaKnown RBP6.65□□□□□ -1.34
RTF1-206ENST00000560447 CCL18P55774 89 aa6.65□□□□□ -1.34
RTF1-206ENST00000560447 CKS1BP61024 79 aa6.65□□□□□ -1.34
RTF1-206ENST00000560447 KIAA0087Q14695 138 aa6.65□□□□□ -1.34
RTF1-206ENST00000560447 LINC00269Q8N2A0 174 aa6.65□□□□□ -1.34
RTF1-206ENST00000560447 CLEC2BQ92478 149 aa6.65□□□□□ -1.34
RTF1-206ENST00000560447 TEP1Q99973 2627 aaKnown RBP6.65□□□□□ -1.34
RTF1-206ENST00000560447 CDIP1Q9H305 208 aa6.64□□□□□ -1.35
RTF1-206ENST00000560447 IGKV2-28A0A075B6P5 120 aa6.63□□□□□ -1.35
RTF1-206ENST00000560447 A0A1B0GX51 115 aa6.63□□□□□ -1.35
RTF1-206ENST00000560447 DEFB4AO15263 64 aa6.63□□□□□ -1.35
RTF1-206ENST00000560447 IGKV2D-28P01615 120 aa6.63□□□□□ -1.35
RTF1-206ENST00000560447 MALP21145 153 aa6.63□□□□□ -1.35
RTF1-206ENST00000560447 LINC00337Q8N6G1 96 aa6.63□□□□□ -1.35
RTF1-206ENST00000560447 GVQW2A0A096LPI5 108 aaPredicted RBP6.62□□□□□ -1.35
RTF1-206ENST00000560447 ACYP1P07311 99 aa6.62□□□□□ -1.35
RTF1-206ENST00000560447 KRTAP24-1Q3LI83 254 aa6.62□□□□□ -1.35
RTF1-206ENST00000560447 LYPD5Q6UWN5 251 aa6.62□□□□□ -1.35
RTF1-206ENST00000560447 C3orf56Q8N813 242 aa6.62□□□□□ -1.35
RTF1-206ENST00000560447 A0A0J9YWU9 116 aa6.61□□□□□ -1.35
RTF1-206ENST00000560447 F8WDY8 70 aa6.61□□□□□ -1.35
RTF1-206ENST00000560447 PFN2P35080 140 aa6.61□□□□□ -1.35
RTF1-206ENST00000560447 VWFP04275 2813 aa6.61□□□□□ -1.35
RTF1-206ENST00000560447 HTN3P15516 51 aa6.6□□□□□ -1.35
RTF1-206ENST00000560447 KRTAP10-11P60412 298 aa6.6□□□□□ -1.35
RTF1-206ENST00000560447 CLPSL2Q6UWE3 100 aa6.6□□□□□ -1.35
RTF1-206ENST00000560447 SMIM11BQ8TCY0 68 aa6.6□□□□□ -1.35
RTF1-206ENST00000560447 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
RTF1-206ENST00000560447 INAFM2P0DMQ5 153 aa6.59□□□□□ -1.35
RTF1-206ENST00000560447 SPAG11BQ08648 103 aa6.59□□□□□ -1.35
RTF1-206ENST00000560447 KPRPQ5T749 579 aaPredicted RBP6.59□□□□□ -1.35
RTF1-206ENST00000560447 TMEM126AQ9H061 195 aa6.59□□□□□ -1.35
RTF1-206ENST00000560447 TENM1Q9UKZ4 2725 aa6.59□□□□□ -1.35
RTF1-206ENST00000560447 TEX49A0A1B0GTD5 131 aa6.58□□□□□ -1.36
RTF1-206ENST00000560447 DNAL4O96015 105 aa6.58□□□□□ -1.36
RTF1-206ENST00000560447 Q6Q795 121 aa6.58□□□□□ -1.36
RTF1-206ENST00000560447 ATRQ13535 2644 aa6.58□□□□□ -1.36
RTF1-206ENST00000560447 SNCGO76070 127 aa6.57□□□□□ -1.36
RTF1-206ENST00000560447 BAALC-AS2P0C853 105 aa6.57□□□□□ -1.36
RTF1-206ENST00000560447 XGP55808 180 aa6.57□□□□□ -1.36
RTF1-206ENST00000560447 C21orf62-AS1Q17RA5 79 aa6.57□□□□□ -1.36
RTF1-206ENST00000560447 ENHOQ6UWT2 76 aa6.57□□□□□ -1.36
RTF1-206ENST00000560447 KLK12Q9UKR0 248 aa6.57□□□□□ -1.36
RTF1-206ENST00000560447 OR13C6PQ8NH95 151 aa6.56□□□□□ -1.36
RTF1-206ENST00000560447 LINC00167Q96N53 147 aa6.56□□□□□ -1.36
RTF1-206ENST00000560447 DNAH3Q8TD57 4116 aa6.56□□□□□ -1.36
RTF1-206ENST00000560447 IGLV10-54A0A075B6I4 117 aa6.55□□□□□ -1.36
RTF1-206ENST00000560447 H3BQ85 93 aa6.55□□□□□ -1.36
RTF1-206ENST00000560447 LINC01556Q5JQF7 62 aa6.55□□□□□ -1.36
RTF1-206ENST00000560447 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
RTF1-206ENST00000560447 C15orf53Q8NAA6 179 aa6.55□□□□□ -1.36
RTF1-206ENST00000560447 C2orf48Q96LS8 159 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms