RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 FAM30AQ9NZY2 134 aa8.96□□□□□ -0.98
SMAD3-214ENST00000560402 TMEM223A0PJW6 202 aa8.95□□□□□ -0.98
SMAD3-214ENST00000560402 ZNF22P17026 224 aaPredicted RBP8.95□□□□□ -0.98
SMAD3-214ENST00000560402 BVES-AS1Q5T3Y7 98 aa8.95□□□□□ -0.98
SMAD3-214ENST00000560402 NTM-AS1Q6ZSK4 140 aa8.95□□□□□ -0.98
SMAD3-214ENST00000560402 Q8N3U1 123 aa8.95□□□□□ -0.98
SMAD3-214ENST00000560402 J3QQQ9 107 aa8.94□□□□□ -0.98
SMAD3-214ENST00000560402 LINC00469Q8N7U9 141 aa8.94□□□□□ -0.98
SMAD3-214ENST00000560402 ORAOV1Q8WV07 137 aa8.94□□□□□ -0.98
SMAD3-214ENST00000560402 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.93□□□□□ -0.98
SMAD3-214ENST00000560402 LECT2O14960 151 aa8.93□□□□□ -0.98
SMAD3-214ENST00000560402 UBE2D1P51668 147 aa8.93□□□□□ -0.98
SMAD3-214ENST00000560402 LINC00528Q8N1L1 170 aa8.93□□□□□ -0.98
SMAD3-214ENST00000560402 TP73-AS1Q9UF72 201 aa8.93□□□□□ -0.98
SMAD3-214ENST00000560402 J3QL48 77 aa8.92□□□□□ -0.98
SMAD3-214ENST00000560402 PTTG1IPP53801 180 aa8.92□□□□□ -0.98
SMAD3-214ENST00000560402 RNASE13Q5GAN3 156 aaKnown RBP8.92□□□□□ -0.98
SMAD3-214ENST00000560402 HIST1H4GQ99525 98 aa8.92□□□□□ -0.98
SMAD3-214ENST00000560402 CDC42SE2Q9NRR3 84 aa8.92□□□□□ -0.98
SMAD3-214ENST00000560402 IGKV2D-24A0A075B6R9 120 aa8.91□□□□□ -0.98
SMAD3-214ENST00000560402 A0A1B0GV90 55 aa8.91□□□□□ -0.98
SMAD3-214ENST00000560402 TMEM238LA0A1B0GVL6 79 aa8.91□□□□□ -0.98
SMAD3-214ENST00000560402 A6NJY4 79 aa8.91□□□□□ -0.98
SMAD3-214ENST00000560402 GAGE6Q13070 117 aa8.91□□□□□ -0.98
SMAD3-214ENST00000560402 FAM19A3Q7Z5A8 133 aa8.91□□□□□ -0.98
SMAD3-214ENST00000560402 IGHV1-58A0A0C4DH39 117 aa8.9□□□□□ -0.98
SMAD3-214ENST00000560402 C14orf177Q52M58 125 aa8.9□□□□□ -0.98
SMAD3-214ENST00000560402 TTTY13Q9BZ97 58 aa8.9□□□□□ -0.98
SMAD3-214ENST00000560402 KLK12Q9UKR0 248 aa8.9□□□□□ -0.98
SMAD3-214ENST00000560402 IGLV5-45A0A087WSX0 123 aa8.89□□□□□ -0.99
SMAD3-214ENST00000560402 TRAV13-1A0A0B4J241 112 aa8.89□□□□□ -0.99
SMAD3-214ENST00000560402 KRTAP29-1A8MX34 341 aaPredicted RBP8.89□□□□□ -0.99
SMAD3-214ENST00000560402 TMEM262E9PQX1 116 aa8.89□□□□□ -0.99
SMAD3-214ENST00000560402 SRSF9Q13242 221 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMAD3-214ENST00000560402 SCXQ7RTU7 201 aa8.89□□□□□ -0.99
SMAD3-214ENST00000560402 CEND1Q8N111 149 aa8.89□□□□□ -0.99
SMAD3-214ENST00000560402 FAM104AQ969W3 186 aa8.89□□□□□ -0.99
SMAD3-214ENST00000560402 UBE2WQ96B02 151 aa8.89□□□□□ -0.99
SMAD3-214ENST00000560402 A0A1B0GUV1 79 aa8.88□□□□□ -0.99
SMAD3-214ENST00000560402 TMEM238C9JI98 176 aa8.88□□□□□ -0.99
SMAD3-214ENST00000560402 CCL25O15444 150 aa8.88□□□□□ -0.99
SMAD3-214ENST00000560402 CRPP02741 224 aa8.87□□□□□ -0.99
SMAD3-214ENST00000560402 LINC00242Q5T6M2 205 aa8.87□□□□□ -0.99
SMAD3-214ENST00000560402 C1orf43Q9BWL3 253 aa8.87□□□□□ -0.99
SMAD3-214ENST00000560402 SPANXB1Q9NS25 103 aaPredicted RBP8.87□□□□□ -0.99
SMAD3-214ENST00000560402 IGHV3-64A0A075B6Q5 118 aa8.86□□□□□ -0.99
SMAD3-214ENST00000560402 SMIM13P0DJ93 91 aa8.86□□□□□ -0.99
SMAD3-214ENST00000560402 SS18Q15532 418 aa8.86□□□□□ -0.99
SMAD3-214ENST00000560402 CDKN2A-AS1Q9UH64 79 aa8.86□□□□□ -0.99
SMAD3-214ENST00000560402 SPINK8P0C7L1 97 aa8.85□□□□□ -0.99
SMAD3-214ENST00000560402 NDUFA12Q9UI09 145 aa8.85□□□□□ -0.99
SMAD3-214ENST00000560402 TSPEAR-AS2P59090 65 aa8.84□□□□□ -0.99
SMAD3-214ENST00000560402 CIRBPQ14011 172 aaKnown RBP8.84□□□□□ -0.99
SMAD3-214ENST00000560402 LINC01620Q4KN68 170 aa8.84□□□□□ -0.99
SMAD3-214ENST00000560402 SFTA2Q6UW10 78 aa8.84□□□□□ -0.99
SMAD3-214ENST00000560402 COPS9Q8WXC6 57 aa8.84□□□□□ -0.99
SMAD3-214ENST00000560402 RBX1P62877 108 aa8.83□□□□□ -1
SMAD3-214ENST00000560402 MIAQ16674 131 aa8.83□□□□□ -1
SMAD3-214ENST00000560402 Q6ZVH6 145 aa8.83□□□□□ -1
SMAD3-214ENST00000560402 IGKV3OR2-268A0A0C4DH90 116 aa8.82□□□□□ -1
SMAD3-214ENST00000560402 TAX1BP3O14907 124 aa8.82□□□□□ -1
SMAD3-214ENST00000560402 NDUFA1O15239 70 aa8.82□□□□□ -1
SMAD3-214ENST00000560402 HERV-K104P63124 156 aa8.82□□□□□ -1
SMAD3-214ENST00000560402 ENHOQ6UWT2 76 aa8.82□□□□□ -1
SMAD3-214ENST00000560402 CIRBP-AS1Q8TBR5 109 aa8.82□□□□□ -1
SMAD3-214ENST00000560402 NHP2Q9NX24 153 aaKnown RBP8.82□□□□□ -1
SMAD3-214ENST00000560402 IGLV4-60A0A075B6I1 120 aa8.81□□□□□ -1
SMAD3-214ENST00000560402 IGLV5-39A0A0G2JS06 123 aa8.81□□□□□ -1
SMAD3-214ENST00000560402 TIMM17BO60830 172 aa8.81□□□□□ -1
SMAD3-214ENST00000560402 ANGP03950 147 aaKnown RBP8.81□□□□□ -1
SMAD3-214ENST00000560402 FXYD2P54710 66 aa8.81□□□□□ -1
SMAD3-214ENST00000560402 KRTAP10-4P60372 401 aaPredicted RBP8.81□□□□□ -1
SMAD3-214ENST00000560402 RPL24P83731 157 aaKnown RBP8.81□□□□□ -1
SMAD3-214ENST00000560402 PKHD1L1Q86WI1 4243 aa8.81□□□□□ -1
SMAD3-214ENST00000560402 FAT3Q8TDW7 4589 aa8.8□□□□□ -1
SMAD3-214ENST00000560402 A0A0J9YXY3 114 aa8.8□□□□□ -1
SMAD3-214ENST00000560402 LINC00959A0A1B0GUT2 108 aa8.8□□□□□ -1
SMAD3-214ENST00000560402 SMIM1B2RUZ4 78 aa8.8□□□□□ -1
SMAD3-214ENST00000560402 OXTP01178 125 aa8.8□□□□□ -1
SMAD3-214ENST00000560402 COX6A2Q02221 97 aa8.8□□□□□ -1
SMAD3-214ENST00000560402 VAMP3Q15836 100 aa8.8□□□□□ -1
SMAD3-214ENST00000560402 LINC01561Q8N1V8 128 aa8.8□□□□□ -1
SMAD3-214ENST00000560402 C9orf118A6NHY6 69 aa8.79□□□□□ -1
SMAD3-214ENST00000560402 USP17L23D6RBM5 183 aa8.79□□□□□ -1
SMAD3-214ENST00000560402 SERTAD4-AS1Q5TG53 156 aa8.79□□□□□ -1
SMAD3-214ENST00000560402 PRR34Q9NV39 138 aa8.79□□□□□ -1
SMAD3-214ENST00000560402 LRP1Q07954 4544 aaKnown RBP8.79□□□□□ -1
SMAD3-214ENST00000560402 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.78□□□□□ -1
SMAD3-214ENST00000560402 A0A087WZ39 114 aa8.77□□□□□ -1.01
SMAD3-214ENST00000560402 PRSS2P07478 247 aa8.77□□□□□ -1.01
SMAD3-214ENST00000560402 IFITM1P13164 125 aa8.77□□□□□ -1.01
SMAD3-214ENST00000560402 LYRM7Q5U5X0 104 aa8.77□□□□□ -1.01
SMAD3-214ENST00000560402 GTF2H5Q6ZYL4 71 aa8.77□□□□□ -1.01
SMAD3-214ENST00000560402 COX7B2Q8TF08 81 aa8.77□□□□□ -1.01
SMAD3-214ENST00000560402 RAB37Q96AX2 223 aa8.77□□□□□ -1.01
SMAD3-214ENST00000560402 SPANXDQ9BXN6 97 aa8.77□□□□□ -1.01
SMAD3-214ENST00000560402 SPANXCQ9NY87 97 aa8.77□□□□□ -1.01
SMAD3-214ENST00000560402 HMCN2Q8NDA2 5059 aa8.77□□□□□ -1.01
SMAD3-214ENST00000560402 IGHV3OR16-9A0A0B4J2B5 98 aa8.76□□□□□ -1.01
SMAD3-214ENST00000560402 A0A1B0GWB2 263 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 214.5 ms