RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	FAM236B	A0A1B0GV22	79 aa		4.02	□□□□□ -1.77
LRRC49-223	ENST00000560369	NDUFA1	O15239	70 aa		4.02	□□□□□ -1.77
LRRC49-223	ENST00000560369	TMEM243	Q9BU79	118 aa		4.02	□□□□□ -1.77
LRRC49-223	ENST00000560369	TRBV6-4	A0A1B0GX49	114 aa		4.02	□□□□□ -1.77
LRRC49-223	ENST00000560369	LINC00308	Q8TCZ7	52 aa		4.02	□□□□□ -1.77
LRRC49-223	ENST00000560369	UBE2L6	O14933	153 aa		4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369	GYPE	P15421	78 aa		4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369	TNP2	Q05952	138 aa		4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369	C5orf38	Q86SI9	138 aa		4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369	FAM110A	Q9BQ89	295 aa		4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369	C11orf68	Q9H3H3	251 aa	Known RBP	4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369	CELA1	Q9UNI1	258 aa		4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369	TRBV6-8	A0A0A6YYG3	113 aa		4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369	HERVK_113	P63121	156 aa		4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369	DEFB121	Q5J5C9	76 aa		4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369	FAM222A	Q5U5X8	452 aa		4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369	FAM218A	Q96MZ4	157 aa		4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369		Q9HAA7	133 aa		4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369	TOMM7	Q9P0U1	55 aa		4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369	CSDC2	Q9Y534	153 aa	Known RBP	4.01	□□□□□ -1.77
LRRC49-223	ENST00000560369	TRBV7-7	A0A0K0K1E9	115 aa		4	□□□□□ -1.77
LRRC49-223	ENST00000560369	GHRH	P01286	108 aa		4	□□□□□ -1.77
LRRC49-223	ENST00000560369	FAM19A3	Q7Z5A8	133 aa		4	□□□□□ -1.77
LRRC49-223	ENST00000560369	PRIMA1	Q86XR5	153 aa		4	□□□□□ -1.77
LRRC49-223	ENST00000560369	FAM240A	A0A1B0GVK7	77 aa		4	□□□□□ -1.77
LRRC49-223	ENST00000560369	COX7A2L	O14548	114 aa		4	□□□□□ -1.77
LRRC49-223	ENST00000560369	CMC4	P56277	68 aa	Predicted RBP	4	□□□□□ -1.77
LRRC49-223	ENST00000560369	NBEAL1	Q6ZS30	2694 aa		3.99	□□□□□ -1.77
LRRC49-223	ENST00000560369	BAALC-AS2	P0C853	105 aa		3.99	□□□□□ -1.77
LRRC49-223	ENST00000560369	CIRBP	Q14011	172 aa	Known RBP	3.99	□□□□□ -1.77
LRRC49-223	ENST00000560369	MRPL23	Q16540	153 aa	Known RBP	3.99	□□□□□ -1.77
LRRC49-223	ENST00000560369	LINC00612	Q8N6U2	182 aa		3.99	□□□□□ -1.77
LRRC49-223	ENST00000560369	KLK5	Q9Y337	293 aa	Predicted RBP	3.99	□□□□□ -1.77
LRRC49-223	ENST00000560369	C22orf24	Q9Y442	160 aa		3.99	□□□□□ -1.77
LRRC49-223	ENST00000560369	DNAH3	Q8TD57	4116 aa		3.99	□□□□□ -1.77
LRRC49-223	ENST00000560369	IGHV3OR16-9	A0A0B4J2B5	98 aa		3.99	□□□□□ -1.77
LRRC49-223	ENST00000560369	IGHV4-28	A0A0C4DH34	117 aa		3.99	□□□□□ -1.77
LRRC49-223	ENST00000560369	TIMM17B	O60830	172 aa		3.99	□□□□□ -1.77
LRRC49-223	ENST00000560369	PPDPF	Q9H3Y8	114 aa		3.99	□□□□□ -1.77
LRRC49-223	ENST00000560369	COL6A5	A8TX70	2615 aa		3.98	□□□□□ -1.77
LRRC49-223	ENST00000560369	XCL1	P47992	114 aa		3.98	□□□□□ -1.77
LRRC49-223	ENST00000560369	C9orf129	Q5T035	196 aa	Known RBP	3.98	□□□□□ -1.77
LRRC49-223	ENST00000560369	GAGE2A	Q6NT46	116 aa		3.98	□□□□□ -1.77
LRRC49-223	ENST00000560369	KIR2DL5B	Q8NHK3	375 aa		3.98	□□□□□ -1.77
LRRC49-223	ENST00000560369	IGLV10-54	A0A075B6I4	117 aa		3.98	□□□□□ -1.77
LRRC49-223	ENST00000560369	LINC00959	A0A1B0GUT2	108 aa		3.98	□□□□□ -1.77
LRRC49-223	ENST00000560369	HTN3	P15516	51 aa		3.98	□□□□□ -1.77
LRRC49-223	ENST00000560369	C9orf153	Q5TBE3	101 aa		3.98	□□□□□ -1.77
LRRC49-223	ENST00000560369	COX7B2	Q8TF08	81 aa		3.98	□□□□□ -1.77
LRRC49-223	ENST00000560369	RETN	Q9HD89	108 aa		3.98	□□□□□ -1.77
LRRC49-223	ENST00000560369	LOC107984640	A0A0U1RRK4	108 aa		3.97	□□□□□ -1.77
LRRC49-223	ENST00000560369	PFN2	P35080	140 aa		3.97	□□□□□ -1.77
LRRC49-223	ENST00000560369	MIR7-3HG	Q8N6C7	128 aa		3.97	□□□□□ -1.77
LRRC49-223	ENST00000560369	IGKV2-28	A0A075B6P5	120 aa		3.97	□□□□□ -1.77
LRRC49-223	ENST00000560369	IGKV2D-28	P01615	120 aa		3.97	□□□□□ -1.77
LRRC49-223	ENST00000560369	C9orf66	Q5T8R8	295 aa		3.97	□□□□□ -1.77
LRRC49-223	ENST00000560369	LINC00643	Q86TS7	51 aa		3.97	□□□□□ -1.77
LRRC49-223	ENST00000560369	LYST	Q99698	3801 aa		3.96	□□□□□ -1.77
LRRC49-223	ENST00000560369		A0A087WYN8	130 aa		3.96	□□□□□ -1.78
LRRC49-223	ENST00000560369	PAX4	O43316	350 aa		3.96	□□□□□ -1.78
LRRC49-223	ENST00000560369	LINC00269	Q8N2A0	174 aa		3.96	□□□□□ -1.78
LRRC49-223	ENST00000560369	LINC00337	Q8N6G1	96 aa		3.96	□□□□□ -1.78
LRRC49-223	ENST00000560369		Q8NAQ8	132 aa		3.96	□□□□□ -1.78
LRRC49-223	ENST00000560369	LINC00526	Q96FQ7	95 aa		3.96	□□□□□ -1.78
LRRC49-223	ENST00000560369	COL7A1	Q02388	2944 aa		3.96	□□□□□ -1.78
LRRC49-223	ENST00000560369	ATP5G1	P05496	136 aa		3.96	□□□□□ -1.78
LRRC49-223	ENST00000560369	ACYP1	P07311	99 aa		3.96	□□□□□ -1.78
LRRC49-223	ENST00000560369	IGHV4-30-4	P0DP06	118 aa		3.96	□□□□□ -1.78
LRRC49-223	ENST00000560369	PRR3	P79522	188 aa	Known RBP	3.96	□□□□□ -1.78
LRRC49-223	ENST00000560369	SDIM1	Q6ZPB5	146 aa		3.96	□□□□□ -1.78
LRRC49-223	ENST00000560369	C3orf22	Q8N5N4	141 aa		3.96	□□□□□ -1.78
LRRC49-223	ENST00000560369	PRO0255	Q9UI72	69 aa		3.96	□□□□□ -1.78
LRRC49-223	ENST00000560369		A0A087WZ39	114 aa		3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369	IGKV3D-7	A0A0C4DH55	119 aa		3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369	TRAC	P01848	142 aa		3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369	MAL	P21145	153 aa		3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369	LOR	P23490	312 aa	Predicted RBP	3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369	LINC00158	P58513	81 aa		3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369	KRTAP10-11	P60412	298 aa		3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369	C9orf116	Q5BN46	136 aa	Predicted RBP	3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369	CYSTM1	Q9H1C7	97 aa		3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369	C14orf132	Q9NPU4	83 aa		3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369	HUWE1	Q7Z6Z7	4374 aa	Known RBP	3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369	BAHCC1	Q9P281	2608 aa		3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369	CCL18	P55774	89 aa		3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369	CFAP161	Q6P656	301 aa		3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369	TMEM126A	Q9H061	195 aa		3.95	□□□□□ -1.78
LRRC49-223	ENST00000560369		A0A087WVE0	104 aa		3.94	□□□□□ -1.78
LRRC49-223	ENST00000560369	SLPI	P03973	132 aa		3.94	□□□□□ -1.78
LRRC49-223	ENST00000560369	DAD1	P61803	113 aa		3.94	□□□□□ -1.78
LRRC49-223	ENST00000560369		Q8NDZ9	215 aa		3.94	□□□□□ -1.78
LRRC49-223	ENST00000560369	IMUP	Q9GZP8	106 aa		3.94	□□□□□ -1.78
LRRC49-223	ENST00000560369	CYSRT1	A8MQ03	144 aa		3.94	□□□□□ -1.78
LRRC49-223	ENST00000560369	CRP	P02741	224 aa		3.94	□□□□□ -1.78
LRRC49-223	ENST00000560369	C6orf223	Q8N319	242 aa		3.94	□□□□□ -1.78
LRRC49-223	ENST00000560369	SMIM11B	Q8TCY0	68 aa		3.94	□□□□□ -1.78
LRRC49-223	ENST00000560369	SND1-IT1	Q9HBX3	110 aa		3.94	□□□□□ -1.78
LRRC49-223	ENST00000560369	DNAH10	Q8IVF4	4471 aa		3.93	□□□□□ -1.78
LRRC49-223	ENST00000560369	hADV29S1	A0JD25	119 aa		3.93	□□□□□ -1.78
LRRC49-223	ENST00000560369	SMIM9	A6NGZ8	99 aa		3.93	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms