RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 FAM104AQ969W3 186 aa11.64□□□□□ -0.55
RABGGTA-214ENST00000560163 ZNF861PO60384 105 aa11.63□□□□□ -0.55
RABGGTA-214ENST00000560163 SUMO2P61956 95 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-214ENST00000560163 UBE2BP63146 152 aa11.63□□□□□ -0.55
RABGGTA-214ENST00000560163 GAGE2EQ4V326 116 aa11.63□□□□□ -0.55
RABGGTA-214ENST00000560163 TIMM21Q9BVV7 248 aa11.63□□□□□ -0.55
RABGGTA-214ENST00000560163 MAP1LC3AQ9H492 121 aa11.63□□□□□ -0.55
RABGGTA-214ENST00000560163 GAGE2DQ9UEU5 116 aa11.63□□□□□ -0.55
RABGGTA-214ENST00000560163 SMAGPQ0VAQ4 97 aa11.62□□□□□ -0.55
RABGGTA-214ENST00000560163 COA6Q5JTJ3 125 aaKnown RBP11.62□□□□□ -0.55
RABGGTA-214ENST00000560163 FCER1GP30273 86 aa11.61□□□□□ -0.55
RABGGTA-214ENST00000560163 SMIM2Q9BVW6 85 aa11.61□□□□□ -0.55
RABGGTA-214ENST00000560163 NXT2Q9NPJ8 142 aaKnown RBP11.61□□□□□ -0.55
RABGGTA-214ENST00000560163 A0A087X002 238 aa11.6□□□□□ -0.55
RABGGTA-214ENST00000560163 LINC01546A6NGU7 62 aa11.6□□□□□ -0.55
RABGGTA-214ENST00000560163 K7EMI3 77 aa11.59□□□□□ -0.55
RABGGTA-214ENST00000560163 KIAA0087Q14695 138 aa11.59□□□□□ -0.55
RABGGTA-214ENST00000560163 C9orf129Q5T035 196 aaKnown RBP11.59□□□□□ -0.55
RABGGTA-214ENST00000560163 Q8N8P6 123 aa11.59□□□□□ -0.55
RABGGTA-214ENST00000560163 BAGE3Q86Y29 109 aa11.58□□□□□ -0.56
RABGGTA-214ENST00000560163 TCAPO15273 167 aa11.57□□□□□ -0.56
RABGGTA-214ENST00000560163 CHCHD1Q96BP2 118 aaKnown RBP11.57□□□□□ -0.56
RABGGTA-214ENST00000560163 URB1-AS1Q96HZ7 61 aa11.57□□□□□ -0.56
RABGGTA-214ENST00000560163 LOC389332A0A1B0GUA5 103 aa11.56□□□□□ -0.56
RABGGTA-214ENST00000560163 LINC00614P0C842 121 aa11.56□□□□□ -0.56
RABGGTA-214ENST00000560163 IFI27P40305 119 aaPredicted RBP11.56□□□□□ -0.56
RABGGTA-214ENST00000560163 LINC00310P59036 64 aa11.56□□□□□ -0.56
RABGGTA-214ENST00000560163 KIR2DL4Q99706 377 aa11.56□□□□□ -0.56
RABGGTA-214ENST00000560163 SERF1AO75920 110 aa11.55□□□□□ -0.56
RABGGTA-214ENST00000560163 NDUFC2-KCTD14E9PQ53 114 aa11.54□□□□□ -0.56
RABGGTA-214ENST00000560163 NDUFA6P56556 154 aa11.54□□□□□ -0.56
RABGGTA-214ENST00000560163 LCE2DQ5TA82 110 aaPredicted RBP11.54□□□□□ -0.56
RABGGTA-214ENST00000560163 FA2HQ7L5A8 372 aa11.54□□□□□ -0.56
RABGGTA-214ENST00000560163 TMEM18Q96B42 140 aa11.54□□□□□ -0.56
RABGGTA-214ENST00000560163 TRBV30A0A0K0K1B3 111 aa11.53□□□□□ -0.56
RABGGTA-214ENST00000560163 S100A6P06703 90 aa11.53□□□□□ -0.56
RABGGTA-214ENST00000560163 RPL39P62891 51 aaKnown RBP11.53□□□□□ -0.56
RABGGTA-214ENST00000560163 TYMSOSQ8TAI1 123 aa11.53□□□□□ -0.56
RABGGTA-214ENST00000560163 TMA7Q9Y2S6 64 aaKnown RBP11.53□□□□□ -0.56
RABGGTA-214ENST00000560163 NUPR1O60356 82 aa11.52□□□□□ -0.57
RABGGTA-214ENST00000560163 TPRXLQ17RH7 258 aa11.52□□□□□ -0.57
RABGGTA-214ENST00000560163 ORMDL2Q53FV1 153 aa11.52□□□□□ -0.57
RABGGTA-214ENST00000560163 FSIP2Q5CZC0 6907 aa11.52□□□□□ -0.57
RABGGTA-214ENST00000560163 CRYGAP11844 174 aa11.51□□□□□ -0.57
RABGGTA-214ENST00000560163 MRPS36P82909 103 aaKnown RBP11.51□□□□□ -0.57
RABGGTA-214ENST00000560163 RETNLBQ9BQ08 111 aa11.51□□□□□ -0.57
RABGGTA-214ENST00000560163 C5orf52A6NGY3 159 aa11.5□□□□□ -0.57
RABGGTA-214ENST00000560163 HSBP1O75506 76 aa11.5□□□□□ -0.57
RABGGTA-214ENST00000560163 C2orf82Q6UX34 121 aa11.5□□□□□ -0.57
RABGGTA-214ENST00000560163 CDIP1Q9H305 208 aa11.5□□□□□ -0.57
RABGGTA-214ENST00000560163 G0S2P27469 103 aa11.49□□□□□ -0.57
RABGGTA-214ENST00000560163 PACRGQ96M98 296 aaPredicted RBP11.49□□□□□ -0.57
RABGGTA-214ENST00000560163 C22orf24Q9Y442 160 aa11.49□□□□□ -0.57
RABGGTA-214ENST00000560163 LINC01549A6NIU2 74 aa11.48□□□□□ -0.57
RABGGTA-214ENST00000560163 SPANXA1Q9NS26 97 aa11.48□□□□□ -0.57
RABGGTA-214ENST00000560163 A0A096LNJ9 63 aa11.47□□□□□ -0.57
RABGGTA-214ENST00000560163 SNRPEP62304 92 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-214ENST00000560163 KRTAP13-2Q52LG2 175 aa11.47□□□□□ -0.57
RABGGTA-214ENST00000560163 HIST3H2BBQ8N257 126 aa11.47□□□□□ -0.57
RABGGTA-214ENST00000560163 CRCT1Q9UGL9 99 aa11.47□□□□□ -0.57
RABGGTA-214ENST00000560163 IFITM10A6NMD0 228 aa11.46□□□□□ -0.57
RABGGTA-214ENST00000560163 HBDP02042 147 aa11.46□□□□□ -0.57
RABGGTA-214ENST00000560163 LINC00242Q5T6M2 205 aa11.45□□□□□ -0.58
RABGGTA-214ENST00000560163 ANAPC11Q9NYG5 84 aa11.45□□□□□ -0.58
RABGGTA-214ENST00000560163 RPL28P46779 137 aaKnown RBP11.44□□□□□ -0.58
RABGGTA-214ENST00000560163 TOMM6Q96B49 74 aa11.44□□□□□ -0.58
RABGGTA-214ENST00000560163 CYSLTR1Q9Y271 337 aa11.44□□□□□ -0.58
RABGGTA-214ENST00000560163 IGLV7-46A0A075B6I9 117 aa11.43□□□□□ -0.58
RABGGTA-214ENST00000560163 BCE1O60756 84 aa11.43□□□□□ -0.58
RABGGTA-214ENST00000560163 LBHQ53QV2 105 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-214ENST00000560163 PDZD11Q5EBL8 140 aa11.43□□□□□ -0.58
RABGGTA-214ENST00000560163 C2orf66Q6UXQ4 117 aa11.43□□□□□ -0.58
RABGGTA-214ENST00000560163 FAM19A2Q8N3H0 131 aa11.43□□□□□ -0.58
RABGGTA-214ENST00000560163 PMCHL1Q16048 86 aa11.42□□□□□ -0.58
RABGGTA-214ENST00000560163 NPSP0C0P6 89 aa11.41□□□□□ -0.58
RABGGTA-214ENST00000560163 S100A2P29034 98 aa11.41□□□□□ -0.58
RABGGTA-214ENST00000560163 LINC00469Q8N7U9 141 aa11.41□□□□□ -0.58
RABGGTA-214ENST00000560163 HIST1H2BLQ99880 126 aa11.41□□□□□ -0.58
RABGGTA-214ENST00000560163 TP73-AS1Q9UF72 201 aa11.41□□□□□ -0.58
RABGGTA-214ENST00000560163 LINC01561Q8N1V8 128 aa11.4□□□□□ -0.58
RABGGTA-214ENST00000560163 LINC00304Q8N9R0 145 aa11.4□□□□□ -0.58
RABGGTA-214ENST00000560163 PYGO1Q9Y3Y4 419 aa11.4□□□□□ -0.58
RABGGTA-214ENST00000560163 LEPROTL1O95214 131 aa11.39□□□□□ -0.59
RABGGTA-214ENST00000560163 LINC00173Q6ZV60 143 aa11.39□□□□□ -0.59
RABGGTA-214ENST00000560163 TIMM17AQ99595 171 aa11.39□□□□□ -0.59
RABGGTA-214ENST00000560163 XAGE1AQ9HD64 81 aa11.39□□□□□ -0.59
RABGGTA-214ENST00000560163 IGIPA6NJ69 53 aa11.38□□□□□ -0.59
RABGGTA-214ENST00000560163 ATP5LO75964 103 aa11.38□□□□□ -0.59
RABGGTA-214ENST00000560163 ERASQ7Z444 233 aa11.38□□□□□ -0.59
RABGGTA-214ENST00000560163 MRPL55Q7Z7F7 128 aaKnown RBP11.38□□□□□ -0.59
RABGGTA-214ENST00000560163 HSPB8Q9UJY1 196 aa11.38□□□□□ -0.59
RABGGTA-214ENST00000560163 CTAG1AP78358 180 aa11.37□□□□□ -0.59
RABGGTA-214ENST00000560163 KRTAP13-1Q8IUC0 172 aa11.37□□□□□ -0.59
RABGGTA-214ENST00000560163 TMEM141Q96I45 108 aa11.37□□□□□ -0.59
RABGGTA-214ENST00000560163 IGLV4-3A0A075B6K6 122 aa11.36□□□□□ -0.59
RABGGTA-214ENST00000560163 FABP4P15090 132 aa11.36□□□□□ -0.59
RABGGTA-214ENST00000560163 FAM229BQ4G0N7 80 aa11.36□□□□□ -0.59
RABGGTA-214ENST00000560163 SCGB3A1Q96QR1 104 aa11.36□□□□□ -0.59
RABGGTA-214ENST00000560163 IFI27L1Q96BM0 104 aa11.34□□□□□ -0.59
RABGGTA-214ENST00000560163 LINC00167Q96N53 147 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms