RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 MOB4Q9Y3A3 225 aa13.61□□□□□ -0.23
SEMA4B-215ENST00000560089 MSMBP08118 114 aa13.6□□□□□ -0.23
SEMA4B-215ENST00000560089 PDZD2O15018 2839 aa13.6□□□□□ -0.23
SEMA4B-215ENST00000560089 RETNQ9HD89 108 aa13.6□□□□□ -0.23
SEMA4B-215ENST00000560089 NOTCH2Q04721 2471 aa13.6□□□□□ -0.23
SEMA4B-215ENST00000560089 NDUFA4O00483 81 aa13.59□□□□□ -0.23
SEMA4B-215ENST00000560089 DEFB113Q30KQ7 82 aa13.59□□□□□ -0.23
SEMA4B-215ENST00000560089 FLNAP21333 2647 aaKnown RBP13.58□□□□□ -0.24
SEMA4B-215ENST00000560089 MIFP14174 115 aa13.58□□□□□ -0.24
SEMA4B-215ENST00000560089 RHPN1-AS1Q9BWJ2 59 aa13.58□□□□□ -0.24
SEMA4B-215ENST00000560089 SONP18583 2426 aaKnown RBP13.57□□□□□ -0.24
SEMA4B-215ENST00000560089 Q6ZTI0 123 aa13.56□□□□□ -0.24
SEMA4B-215ENST00000560089 PRR15Q8IV56 129 aa13.56□□□□□ -0.24
SEMA4B-215ENST00000560089 Q96MF0 132 aa13.56□□□□□ -0.24
SEMA4B-215ENST00000560089 ACANP16112 2415 aa13.56□□□□□ -0.24
SEMA4B-215ENST00000560089 B4DSR2 109 aa13.55□□□□□ -0.24
SEMA4B-215ENST00000560089 MINOS1-NBL1R4GNA1 71 aa13.55□□□□□ -0.24
SEMA4B-215ENST00000560089 A0A096LNT2 108 aa13.55□□□□□ -0.24
SEMA4B-215ENST00000560089 PLAC8L1A1L4L8 177 aa13.55□□□□□ -0.24
SEMA4B-215ENST00000560089 HAMPP81172 84 aa13.54□□□□□ -0.24
SEMA4B-215ENST00000560089 SPINK13Q1W4C9 94 aa13.54□□□□□ -0.24
SEMA4B-215ENST00000560089 DSCR9P59020 149 aa13.54□□□□□ -0.24
SEMA4B-215ENST00000560089 LINC01547P58512 204 aaPredicted RBP13.53□□□□□ -0.24
SEMA4B-215ENST00000560089 LY6EQ16553 131 aa13.53□□□□□ -0.24
SEMA4B-215ENST00000560089 Q6ZSN1 163 aa13.53□□□□□ -0.24
SEMA4B-215ENST00000560089 TM2D3Q9BRN9 247 aa13.53□□□□□ -0.24
SEMA4B-215ENST00000560089 CR1P17927 2039 aa13.53□□□□□ -0.24
SEMA4B-215ENST00000560089 IBA57-AS1B1ANH7 110 aa13.53□□□□□ -0.24
SEMA4B-215ENST00000560089 LINC00158P58513 81 aa13.53□□□□□ -0.24
SEMA4B-215ENST00000560089 HTN1P15515 57 aa13.52□□□□□ -0.24
SEMA4B-215ENST00000560089 AKAP9Q99996 3911 aa13.52□□□□□ -0.25
SEMA4B-215ENST00000560089 TRBV7-4A0A0J9YYF1 115 aa13.52□□□□□ -0.25
SEMA4B-215ENST00000560089 CCL18P55774 89 aa13.52□□□□□ -0.25
SEMA4B-215ENST00000560089 C19orf54Q5BKX5 351 aa13.52□□□□□ -0.25
SEMA4B-215ENST00000560089 TMEM256-PLSCR3K7ERE1 68 aa13.51□□□□□ -0.25
SEMA4B-215ENST00000560089 ESRGQ1W209 222 aa13.51□□□□□ -0.25
SEMA4B-215ENST00000560089 RNASE1P07998 156 aaKnown RBP13.51□□□□□ -0.25
SEMA4B-215ENST00000560089 Q6ZRU5 148 aa13.51□□□□□ -0.25
SEMA4B-215ENST00000560089 CUBNO60494 3623 aa13.5□□□□□ -0.25
SEMA4B-215ENST00000560089 KRTAP1-3Q8IUG1 177 aa13.5□□□□□ -0.25
SEMA4B-215ENST00000560089 LINC01356Q8N9X3 169 aa13.5□□□□□ -0.25
SEMA4B-215ENST00000560089 PAX4O43316 350 aa13.49□□□□□ -0.25
SEMA4B-215ENST00000560089 IGHV3-11P01762 117 aa13.49□□□□□ -0.25
SEMA4B-215ENST00000560089 C1orf158Q8N1D5 194 aa13.49□□□□□ -0.25
SEMA4B-215ENST00000560089 FAM19A3Q7Z5A8 133 aa13.48□□□□□ -0.25
SEMA4B-215ENST00000560089 IGHV4-31P0DP07 118 aa13.48□□□□□ -0.25
SEMA4B-215ENST00000560089 Q8N3U1 123 aa13.48□□□□□ -0.25
SEMA4B-215ENST00000560089 LINC00167Q96N53 147 aa13.48□□□□□ -0.25
SEMA4B-215ENST00000560089 A0A087WZ39 114 aa13.47□□□□□ -0.25
SEMA4B-215ENST00000560089 CD164Q04900 197 aa13.47□□□□□ -0.25
SEMA4B-215ENST00000560089 LAMTOR3Q9UHA4 124 aa13.47□□□□□ -0.25
SEMA4B-215ENST00000560089 TMEM254Q8TBM7 123 aa13.47□□□□□ -0.25
SEMA4B-215ENST00000560089 H3BUX3 64 aa13.46□□□□□ -0.25
SEMA4B-215ENST00000560089 TOMM7Q9P0U1 55 aa13.46□□□□□ -0.25
SEMA4B-215ENST00000560089 MYO9AB2RTY4 2548 aa13.46□□□□□ -0.25
SEMA4B-215ENST00000560089 Q8N814 137 aa13.45□□□□□ -0.26
SEMA4B-215ENST00000560089 Q6ZVQ6 151 aa13.44□□□□□ -0.26
SEMA4B-215ENST00000560089 COX7B2Q8TF08 81 aa13.44□□□□□ -0.26
SEMA4B-215ENST00000560089 NF1P21359 2839 aa13.44□□□□□ -0.26
SEMA4B-215ENST00000560089 NREPQ16612 68 aa13.44□□□□□ -0.26
SEMA4B-215ENST00000560089 C11orf68Q9H3H3 251 aaKnown RBP13.44□□□□□ -0.26
SEMA4B-215ENST00000560089 DEFB112Q30KQ8 113 aa13.43□□□□□ -0.26
SEMA4B-215ENST00000560089 Q6ZQT0 140 aa13.42□□□□□ -0.26
SEMA4B-215ENST00000560089 C5orf56Q8N8D9 126 aa13.42□□□□□ -0.26
SEMA4B-215ENST00000560089 FUSP35637 526 aaKnown RBP eCLIP13.41□□□□□ -0.26
SEMA4B-215ENST00000560089 MTORP42345 2549 aa13.41□□□□□ -0.26
SEMA4B-215ENST00000560089 TRBV6-4A0A1B0GX49 114 aa13.41□□□□□ -0.26
SEMA4B-215ENST00000560089 IGHV4-59P01825 116 aa13.41□□□□□ -0.26
SEMA4B-215ENST00000560089 DAD1P61803 113 aa13.41□□□□□ -0.26
SEMA4B-215ENST00000560089 K7EQG2 157 aa13.4□□□□□ -0.26
SEMA4B-215ENST00000560089 LY6G6DO95868 133 aa13.4□□□□□ -0.26
SEMA4B-215ENST00000560089 CXCL6P80162 114 aa13.4□□□□□ -0.26
SEMA4B-215ENST00000560089 TMEM89A2RUT3 159 aa13.4□□□□□ -0.27
SEMA4B-215ENST00000560089 M0R2N4 97 aa13.39□□□□□ -0.27
SEMA4B-215ENST00000560089 DYNLRB2Q8TF09 96 aa13.39□□□□□ -0.27
SEMA4B-215ENST00000560089 IGHV3-53P01767 116 aa13.38□□□□□ -0.27
SEMA4B-215ENST00000560089 FLNBO75369 2602 aaKnown RBP13.38□□□□□ -0.27
SEMA4B-215ENST00000560089 TRBV10-1A0A0K0K1A3 114 aa13.38□□□□□ -0.27
SEMA4B-215ENST00000560089 PRM2P04554 102 aa13.38□□□□□ -0.27
SEMA4B-215ENST00000560089 OTOGQ6ZRI0 2925 aa13.38□□□□□ -0.27
SEMA4B-215ENST00000560089 PRYO14603 147 aa13.37□□□□□ -0.27
SEMA4B-215ENST00000560089 CDC42SE2Q9NRR3 84 aa13.36□□□□□ -0.27
SEMA4B-215ENST00000560089 SCXQ7RTU7 201 aa13.35□□□□□ -0.27
SEMA4B-215ENST00000560089 Q6ZTC4 211 aa13.35□□□□□ -0.27
SEMA4B-215ENST00000560089 A6NDX4 124 aa13.35□□□□□ -0.27
SEMA4B-215ENST00000560089 ERC2-IT1O76042 136 aa13.35□□□□□ -0.27
SEMA4B-215ENST00000560089 LOC110117498A0A087WWA1 95 aa13.34□□□□□ -0.27
SEMA4B-215ENST00000560089 USMG5Q96IX5 58 aa13.34□□□□□ -0.27
SEMA4B-215ENST00000560089 K7EQD1 137 aa13.34□□□□□ -0.27
SEMA4B-215ENST00000560089 BPY2O14599 106 aa13.34□□□□□ -0.27
SEMA4B-215ENST00000560089 SETD2Q9BYW2 2564 aaPredicted RBP13.33□□□□□ -0.28
SEMA4B-215ENST00000560089 C6orf223Q8N319 242 aa13.32□□□□□ -0.28
SEMA4B-215ENST00000560089 NTM-AS1Q6ZSK4 140 aa13.32□□□□□ -0.28
SEMA4B-215ENST00000560089 SMR3AQ99954 134 aa13.32□□□□□ -0.28
SEMA4B-215ENST00000560089 SORL1Q92673 2214 aa13.3□□□□□ -0.28
SEMA4B-215ENST00000560089 LRCOL1A6NCL2 159 aa13.3□□□□□ -0.28
SEMA4B-215ENST00000560089 MRPL55Q7Z7F7 128 aaKnown RBP13.3□□□□□ -0.28
SEMA4B-215ENST00000560089 C10orf99Q6UWK7 81 aa13.29□□□□□ -0.28
SEMA4B-215ENST00000560089 ZNF561-AS1K7EIQ3 104 aa13.29□□□□□ -0.28
SEMA4B-215ENST00000560089 K7EMT4 169 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms