RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
HMGB3P26-201ENST00000560051 ARL14EPLP0DKL9 152 aa2.79□□□□□ -1.96
HMGB3P26-201ENST00000560051 COX17Q14061 63 aa2.79□□□□□ -1.96
HMGB3P26-201ENST00000560051 FXYD3Q14802 87 aa2.79□□□□□ -1.96
HMGB3P26-201ENST00000560051 DEFB116Q30KQ4 102 aa2.79□□□□□ -1.96
HMGB3P26-201ENST00000560051 SPATA8Q6RVD6 105 aa2.79□□□□□ -1.96
HMGB3P26-201ENST00000560051 WFDC9Q8NEX5 89 aa2.79□□□□□ -1.96
HMGB3P26-201ENST00000560051 TTTY12Q9BZ98 90 aa2.79□□□□□ -1.96
HMGB3P26-201ENST00000560051 WFDC10AQ9H1F0 79 aa2.79□□□□□ -1.96
HMGB3P26-201ENST00000560051 IGKV3-7A0A075B6H7 116 aa2.78□□□□□ -1.96
HMGB3P26-201ENST00000560051 IGKV3D-15A0A087WSY6 115 aa2.78□□□□□ -1.96
HMGB3P26-201ENST00000560051 LOC110117498A0A087WWA1 95 aa2.78□□□□□ -1.96
HMGB3P26-201ENST00000560051 ZNF137PP52743 207 aa2.78□□□□□ -1.96
HMGB3P26-201ENST00000560051 KLK12Q9UKR0 248 aa2.78□□□□□ -1.96
HMGB3P26-201ENST00000560051 TIMM8BQ9Y5J9 83 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P26-201ENST00000560051 PRR14LQ5THK1 2151 aa2.77□□□□□ -1.97
HMGB3P26-201ENST00000560051 ALPK2Q86TB3 2170 aa2.77□□□□□ -1.97
HMGB3P26-201ENST00000560051 NDUFA3O95167 84 aa2.77□□□□□ -1.97
HMGB3P26-201ENST00000560051 MRGPRG-AS1Q2M3A8 158 aa2.77□□□□□ -1.97
HMGB3P26-201ENST00000560051 FDCSPQ8NFU4 85 aa2.77□□□□□ -1.97
HMGB3P26-201ENST00000560051 SPRR4Q96PI1 79 aa2.77□□□□□ -1.97
HMGB3P26-201ENST00000560051 KLK9Q9UKQ9 250 aa2.77□□□□□ -1.97
HMGB3P26-201ENST00000560051 LRCOL1A6NCL2 159 aa2.76□□□□□ -1.97
HMGB3P26-201ENST00000560051 LINC00322Q6ZN03 302 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P26-201ENST00000560051 GAFA1Q96PS6 74 aa2.76□□□□□ -1.97
HMGB3P26-201ENST00000560051 SDK1Q7Z5N4 2213 aa2.75□□□□□ -1.97
HMGB3P26-201ENST00000560051 UNC13CQ8NB66 2214 aa2.75□□□□□ -1.97
HMGB3P26-201ENST00000560051 TRGV4A0A0C4DH28 118 aa2.75□□□□□ -1.97
HMGB3P26-201ENST00000560051 FAM168BA1KXE4 195 aa2.75□□□□□ -1.97
HMGB3P26-201ENST00000560051 KRTAP10-5P60370 271 aa2.75□□□□□ -1.97
HMGB3P26-201ENST00000560051 RPL38P63173 70 aaKnown RBP2.75□□□□□ -1.97
HMGB3P26-201ENST00000560051 NDPQ00604 133 aa2.75□□□□□ -1.97
HMGB3P26-201ENST00000560051 Q6ZTI0 123 aa2.75□□□□□ -1.97
HMGB3P26-201ENST00000560051 DEFB132Q7Z7B7 95 aa2.75□□□□□ -1.97
HMGB3P26-201ENST00000560051 C9orf163Q8N9P6 203 aa2.75□□□□□ -1.97
HMGB3P26-201ENST00000560051 PATE1Q8WXA2 126 aa2.75□□□□□ -1.97
HMGB3P26-201ENST00000560051 NDUFA4O00483 81 aa2.73□□□□□ -1.97
HMGB3P26-201ENST00000560051 KRTAP5-4Q6L8H1 288 aa2.73□□□□□ -1.97
HMGB3P26-201ENST00000560051 ZNF625Q96I27 306 aaPredicted RBP2.73□□□□□ -1.97
HMGB3P26-201ENST00000560051 ZNF831Q5JPB2 1677 aa2.73□□□□□ -1.97
HMGB3P26-201ENST00000560051 CEP192Q8TEP8 1941 aa2.72□□□□□ -1.97
HMGB3P26-201ENST00000560051 ETDCA0A1B0GVM5 59 aa2.72□□□□□ -1.97
HMGB3P26-201ENST00000560051 SPINT4Q6UDR6 99 aa2.72□□□□□ -1.97
HMGB3P26-201ENST00000560051 CNFNQ9BYD5 112 aa2.72□□□□□ -1.97
HMGB3P26-201ENST00000560051 KCNQ1DNQ9H478 68 aa2.72□□□□□ -1.97
HMGB3P26-201ENST00000560051 PRO2289Q9P1D8 64 aa2.72□□□□□ -1.97
HMGB3P26-201ENST00000560051 ZNF318Q5VUA4 2279 aa2.72□□□□□ -1.97
HMGB3P26-201ENST00000560051 NOTCH3Q9UM47 2321 aa2.71□□□□□ -1.97
HMGB3P26-201ENST00000560051 IGLV4-69A0A075B6H9 119 aa2.71□□□□□ -1.98
HMGB3P26-201ENST00000560051 IGKV2-40A0A087WW87 121 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P26-201ENST00000560051 IGKV3OR2-268A0A0C4DH90 116 aa2.71□□□□□ -1.98
HMGB3P26-201ENST00000560051 MRPL33O75394 65 aaKnown RBP2.71□□□□□ -1.98
HMGB3P26-201ENST00000560051 IGKV2D-40P01614 121 aaPredicted RBP2.71□□□□□ -1.98
HMGB3P26-201ENST00000560051 KRTAP5-9P26371 169 aa2.71□□□□□ -1.98
HMGB3P26-201ENST00000560051 LY6EQ16553 131 aa2.71□□□□□ -1.98
HMGB3P26-201ENST00000560051 DEFB112Q30KQ8 113 aa2.71□□□□□ -1.98
HMGB3P26-201ENST00000560051 TYMSOSQ8TAI1 123 aa2.71□□□□□ -1.98
HMGB3P26-201ENST00000560051 PDE4DIPQ5VU43 2346 aa2.7□□□□□ -1.98
HMGB3P26-201ENST00000560051 SEC16AO15027 2179 aa2.7□□□□□ -1.98
HMGB3P26-201ENST00000560051 A0A0J9YWU9 116 aa2.7□□□□□ -1.98
HMGB3P26-201ENST00000560051 TRBV6-4A0A1B0GX49 114 aa2.7□□□□□ -1.98
HMGB3P26-201ENST00000560051 A0A1W2PNU3 283 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P26-201ENST00000560051 ZNF861PO60384 105 aa2.7□□□□□ -1.98
HMGB3P26-201ENST00000560051 IGLV3-19P01714 112 aa2.7□□□□□ -1.98
HMGB3P26-201ENST00000560051 SPINK7P58062 85 aa2.7□□□□□ -1.98
HMGB3P26-201ENST00000560051 HAMPP81172 84 aa2.7□□□□□ -1.98
HMGB3P26-201ENST00000560051 SMIM2Q9BVW6 85 aa2.7□□□□□ -1.98
HMGB3P26-201ENST00000560051 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
HMGB3P26-201ENST00000560051 COL27A1Q8IZC6 1860 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P26-201ENST00000560051 RNASE3P12724 160 aaKnown RBP2.69□□□□□ -1.98
HMGB3P26-201ENST00000560051 MED13LQ71F56 2210 aa2.68□□□□□ -1.98
HMGB3P26-201ENST00000560051 TRGV2A0A075B6R0 118 aa2.68□□□□□ -1.98
HMGB3P26-201ENST00000560051 A0A1W2PNN7 141 aa2.68□□□□□ -1.98
HMGB3P26-201ENST00000560051 IGLV3-1P01715 115 aa2.68□□□□□ -1.98
HMGB3P26-201ENST00000560051 COA5Q86WW8 74 aa2.68□□□□□ -1.98
HMGB3P26-201ENST00000560051 ARHGAP5-AS1Q96IT6 56 aa2.68□□□□□ -1.98
HMGB3P26-201ENST00000560051 KMT2BQ9UMN6 2715 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P26-201ENST00000560051 CPSF4LA6NMK7 179 aaKnown RBP2.67□□□□□ -1.98
HMGB3P26-201ENST00000560051 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
HMGB3P26-201ENST00000560051 IGKV3-15P01624 115 aa2.67□□□□□ -1.98
HMGB3P26-201ENST00000560051 RTTNQ86VV8 2226 aa2.66□□□□□ -1.98
HMGB3P26-201ENST00000560051 TRGV1A0A0A0MS02 117 aa2.66□□□□□ -1.98
HMGB3P26-201ENST00000560051 COX7BP24311 80 aa2.66□□□□□ -1.98
HMGB3P26-201ENST00000560051 TFF3Q07654 80 aa2.66□□□□□ -1.98
HMGB3P26-201ENST00000560051 BRWD1Q9NSI6 2320 aa2.66□□□□□ -1.98
HMGB3P26-201ENST00000560051 IAPPP10997 89 aa2.65□□□□□ -1.99
HMGB3P26-201ENST00000560051 LINC01590Q5TEZ4 76 aa2.65□□□□□ -1.99
HMGB3P26-201ENST00000560051 RPS27LQ71UM5 84 aaKnown RBP2.65□□□□□ -1.99
HMGB3P26-201ENST00000560051 ADAMTS9Q9P2N4 1935 aa2.64□□□□□ -1.99
HMGB3P26-201ENST00000560051 KNTC1P50748 2209 aa2.64□□□□□ -1.99
HMGB3P26-201ENST00000560051 CACNA1CQ13936 2221 aa2.64□□□□□ -1.99
HMGB3P26-201ENST00000560051 A0A087WTM6 91 aa2.64□□□□□ -1.99
HMGB3P26-201ENST00000560051 A0A087WYN8 130 aa2.64□□□□□ -1.99
HMGB3P26-201ENST00000560051 NCR3O14931 201 aa2.64□□□□□ -1.99
HMGB3P26-201ENST00000560051 FXYD4P59646 89 aa2.64□□□□□ -1.99
HMGB3P26-201ENST00000560051 R4GN34 69 aa2.64□□□□□ -1.99
HMGB3P26-201ENST00000560051 DEFB131BA0A096LNP1 70 aa2.63□□□□□ -1.99
HMGB3P26-201ENST00000560051 NBDYA0A0U1RRE5 68 aa2.63□□□□□ -1.99
HMGB3P26-201ENST00000560051 A0A1B0GU69 56 aa2.63□□□□□ -1.99
HMGB3P26-201ENST00000560051 LINC00959A0A1B0GUT2 108 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms