RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 C6orf226Q5I0X4 101 aa6.94□□□□□ -1.3
LRRC28-216ENST00000559819 SMIM11BQ8TCY0 68 aa6.94□□□□□ -1.3
LRRC28-216ENST00000559819 IBA57-AS1B1ANH7 110 aa6.93□□□□□ -1.3
LRRC28-216ENST00000559819 RPL28P46779 137 aaKnown RBP6.93□□□□□ -1.3
LRRC28-216ENST00000559819 NOTCH2Q04721 2471 aa6.93□□□□□ -1.3
LRRC28-216ENST00000559819 A0A087WYN8 130 aa6.93□□□□□ -1.3
LRRC28-216ENST00000559819 IGHV4-28A0A0C4DH34 117 aa6.93□□□□□ -1.3
LRRC28-216ENST00000559819 TRACP01848 142 aa6.93□□□□□ -1.3
LRRC28-216ENST00000559819 GAGE2BQ13066 116 aa6.93□□□□□ -1.3
LRRC28-216ENST00000559819 SS18Q15532 418 aa6.93□□□□□ -1.3
LRRC28-216ENST00000559819 GAGE2EQ4V326 116 aa6.93□□□□□ -1.3
LRRC28-216ENST00000559819 C9orf66Q5T8R8 295 aa6.93□□□□□ -1.3
LRRC28-216ENST00000559819 PPDPFQ9H3Y8 114 aa6.93□□□□□ -1.3
LRRC28-216ENST00000559819 GAGE2DQ9UEU5 116 aa6.93□□□□□ -1.3
LRRC28-216ENST00000559819 CELA1Q9UNI1 258 aa6.93□□□□□ -1.3
LRRC28-216ENST00000559819 IGLV10-54A0A075B6I4 117 aa6.92□□□□□ -1.3
LRRC28-216ENST00000559819 LINC00269Q8N2A0 174 aa6.92□□□□□ -1.3
LRRC28-216ENST00000559819 SMIM9A6NGZ8 99 aa6.92□□□□□ -1.3
LRRC28-216ENST00000559819 TRRAPQ9Y4A5 3859 aa6.92□□□□□ -1.3
LRRC28-216ENST00000559819 A0A1B0GUV1 79 aa6.92□□□□□ -1.3
LRRC28-216ENST00000559819 ANAPC13Q9BS18 74 aa6.92□□□□□ -1.3
LRRC28-216ENST00000559819 TRAV26-1A0A087WT03 109 aa6.91□□□□□ -1.3
LRRC28-216ENST00000559819 OR13C6PQ8NH95 151 aa6.91□□□□□ -1.3
LRRC28-216ENST00000559819 TENM1Q9UKZ4 2725 aa6.91□□□□□ -1.3
LRRC28-216ENST00000559819 LYRM9A8MSI8 78 aa6.91□□□□□ -1.3
LRRC28-216ENST00000559819 ATP5G1P05496 136 aa6.91□□□□□ -1.3
LRRC28-216ENST00000559819 DAD1P61803 113 aa6.9□□□□□ -1.3
LRRC28-216ENST00000559819 OTOGQ6ZRI0 2925 aa6.9□□□□□ -1.31
LRRC28-216ENST00000559819 NHLRC4P0CG21 123 aaPredicted RBP6.9□□□□□ -1.31
LRRC28-216ENST00000559819 HTN3P15516 51 aa6.9□□□□□ -1.31
LRRC28-216ENST00000559819 PRR3P79522 188 aaKnown RBP6.9□□□□□ -1.31
LRRC28-216ENST00000559819 Q8IZM0 81 aa6.9□□□□□ -1.31
LRRC28-216ENST00000559819 FAM240AA0A1B0GVK7 77 aa6.89□□□□□ -1.31
LRRC28-216ENST00000559819 ANGP03950 147 aaKnown RBP6.89□□□□□ -1.31
LRRC28-216ENST00000559819 MALP21145 153 aa6.89□□□□□ -1.31
LRRC28-216ENST00000559819 C9orf129Q5T035 196 aaKnown RBP6.89□□□□□ -1.31
LRRC28-216ENST00000559819 SMCR5Q8TEV8 140 aa6.89□□□□□ -1.31
LRRC28-216ENST00000559819 CHCHD10Q8WYQ3 142 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-216ENST00000559819 NDUFV3P56181 108 aaKnown RBP6.88□□□□□ -1.31
LRRC28-216ENST00000559819 C9orf116Q5BN46 136 aaPredicted RBP6.88□□□□□ -1.31
LRRC28-216ENST00000559819 BAHCC1Q9P281 2608 aa6.88□□□□□ -1.31
LRRC28-216ENST00000559819 APOC4P55056 127 aa6.88□□□□□ -1.31
LRRC28-216ENST00000559819 REG3AQ06141 175 aa6.88□□□□□ -1.31
LRRC28-216ENST00000559819 KIAA0087Q14695 138 aa6.88□□□□□ -1.31
LRRC28-216ENST00000559819 Q8NAQ8 132 aa6.88□□□□□ -1.31
LRRC28-216ENST00000559819 LECT2O14960 151 aa6.87□□□□□ -1.31
LRRC28-216ENST00000559819 SLPIP03973 132 aa6.87□□□□□ -1.31
LRRC28-216ENST00000559819 CD164L2Q6UWJ8 174 aa6.87□□□□□ -1.31
LRRC28-216ENST00000559819 DNAL4O96015 105 aa6.86□□□□□ -1.31
LRRC28-216ENST00000559819 Q6Q795 121 aa6.86□□□□□ -1.31
LRRC28-216ENST00000559819 NSD1Q96L73 2696 aaPredicted RBP6.86□□□□□ -1.31
LRRC28-216ENST00000559819 MRPL23Q16540 153 aaKnown RBP6.86□□□□□ -1.31
LRRC28-216ENST00000559819 GAGE2AQ6NT46 116 aa6.85□□□□□ -1.31
LRRC28-216ENST00000559819 C6orf223Q8N319 242 aa6.85□□□□□ -1.31
LRRC28-216ENST00000559819 LINC00526Q96FQ7 95 aa6.85□□□□□ -1.31
LRRC28-216ENST00000559819 Q8NDZ9 215 aa6.85□□□□□ -1.31
LRRC28-216ENST00000559819 H0YGX0 51 aa6.85□□□□□ -1.31
LRRC28-216ENST00000559819 NANOS2P60321 138 aaKnown RBP6.85□□□□□ -1.31
LRRC28-216ENST00000559819 LINC01561Q8N1V8 128 aa6.85□□□□□ -1.31
LRRC28-216ENST00000559819 IGHV4-30-4P0DP06 118 aa6.84□□□□□ -1.31
LRRC28-216ENST00000559819 ATRQ13535 2644 aa6.84□□□□□ -1.32
LRRC28-216ENST00000559819 CCDC179H3BU77 68 aa6.84□□□□□ -1.32
LRRC28-216ENST00000559819 ACYP1P07311 99 aa6.84□□□□□ -1.32
LRRC28-216ENST00000559819 MIFP14174 115 aa6.84□□□□□ -1.32
LRRC28-216ENST00000559819 C10orf25Q5T742 122 aa6.84□□□□□ -1.32
LRRC28-216ENST00000559819 C14orf132Q9NPU4 83 aa6.84□□□□□ -1.32
LRRC28-216ENST00000559819 SPART-AS1P0CW21 52 aa6.83□□□□□ -1.32
LRRC28-216ENST00000559819 NCR3O14931 201 aa6.83□□□□□ -1.32
LRRC28-216ENST00000559819 TRBV7-7A0A0K0K1E9 115 aa6.82□□□□□ -1.32
LRRC28-216ENST00000559819 INAFM2P0DMQ5 153 aa6.82□□□□□ -1.32
LRRC28-216ENST00000559819 UNQ6190/PRO20217Q6UXQ8 127 aa6.82□□□□□ -1.32
LRRC28-216ENST00000559819 KLK12Q9UKR0 248 aa6.82□□□□□ -1.32
LRRC28-216ENST00000559819 RETNQ9HD89 108 aa6.82□□□□□ -1.32
LRRC28-216ENST00000559819 HIVEP1P15822 2718 aa6.81□□□□□ -1.32
LRRC28-216ENST00000559819 SPAG11BQ08648 103 aa6.81□□□□□ -1.32
LRRC28-216ENST00000559819 LELP1Q5T871 98 aa6.81□□□□□ -1.32
LRRC28-216ENST00000559819 CXCL5P42830 114 aa6.81□□□□□ -1.32
LRRC28-216ENST00000559819 B5MCH6 92 aa6.8□□□□□ -1.32
LRRC28-216ENST00000559819 TEP1Q99973 2627 aaKnown RBP6.8□□□□□ -1.32
LRRC28-216ENST00000559819 LINC00643Q86TS7 51 aa6.8□□□□□ -1.32
LRRC28-216ENST00000559819 COX17Q14061 63 aa6.79□□□□□ -1.32
LRRC28-216ENST00000559819 ENHOQ6UWT2 76 aa6.79□□□□□ -1.32
LRRC28-216ENST00000559819 WFDC9Q8NEX5 89 aa6.79□□□□□ -1.32
LRRC28-216ENST00000559819 FAM236AA0A1B0GUQ0 79 aa6.79□□□□□ -1.32
LRRC28-216ENST00000559819 FAM236BA0A1B0GV22 79 aa6.79□□□□□ -1.32
LRRC28-216ENST00000559819 NDUFC2O95298 119 aa6.79□□□□□ -1.32
LRRC28-216ENST00000559819 SDIM1Q6ZPB5 146 aa6.79□□□□□ -1.32
LRRC28-216ENST00000559819 CYSRT1A8MQ03 144 aa6.78□□□□□ -1.32
LRRC28-216ENST00000559819 OXLD1Q5BKU9 147 aa6.78□□□□□ -1.32
LRRC28-216ENST00000559819 OBSCN-AS1Q96MR7 158 aa6.78□□□□□ -1.32
LRRC28-216ENST00000559819 ORMDL1Q9P0S3 153 aa6.78□□□□□ -1.32
LRRC28-216ENST00000559819 SS18L2Q9UHA2 77 aa6.78□□□□□ -1.32
LRRC28-216ENST00000559819 LYPD5Q6UWN5 251 aa6.78□□□□□ -1.32
LRRC28-216ENST00000559819 KLK5Q9Y337 293 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-216ENST00000559819 C6orf99Q4VX62 202 aa6.78□□□□□ -1.32
LRRC28-216ENST00000559819 Q8N814 137 aa6.78□□□□□ -1.32
LRRC28-216ENST00000559819 TMEM126AQ9H061 195 aa6.78□□□□□ -1.32
LRRC28-216ENST00000559819 PRR34Q9NV39 138 aa6.77□□□□□ -1.33
LRRC28-216ENST00000559819 KRTAP10-11P60412 298 aa6.77□□□□□ -1.33
LRRC28-216ENST00000559819 WFDC10BQ8IUB3 73 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 1063.1 ms