RNA–Protein interactions for RNA: ENST00000559257.5

USP3-211, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 2,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-211ENST00000559257 LINC00476Q8WZB0 136 aa5.67□□□□□ -1.5
USP3-211ENST00000559257 WFDC10AQ9H1F0 79 aa5.67□□□□□ -1.5
USP3-211ENST00000559257 B4DSR2 109 aa5.67□□□□□ -1.5
USP3-211ENST00000559257 H3BPC8 53 aa5.67□□□□□ -1.5
USP3-211ENST00000559257 LMO4P61968 165 aa5.67□□□□□ -1.5
USP3-211ENST00000559257 FAM215AQ9Y5M1 114 aa5.67□□□□□ -1.5
USP3-211ENST00000559257 AHCTF1Q8WYP5 2266 aa5.66□□□□□ -1.5
USP3-211ENST00000559257 A0A1B0GW54 56 aa5.66□□□□□ -1.5
USP3-211ENST00000559257 SPTBN5Q9NRC6 3674 aaKnown RBP5.66□□□□□ -1.5
USP3-211ENST00000559257 IGLV1-51P01701 117 aa5.66□□□□□ -1.5
USP3-211ENST00000559257 PLA2G2AP14555 144 aa5.66□□□□□ -1.5
USP3-211ENST00000559257 DEFB109BQ30KR1 87 aa5.66□□□□□ -1.5
USP3-211ENST00000559257 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.66□□□□□ -1.5
USP3-211ENST00000559257 WDR87Q6ZQQ6 2873 aa5.65□□□□□ -1.5
USP3-211ENST00000559257 IGHV4-30-2A0A087WSY4 118 aa5.65□□□□□ -1.5
USP3-211ENST00000559257 TECTAO75443 2155 aa5.65□□□□□ -1.51
USP3-211ENST00000559257 URB1O60287 2271 aaKnown RBP5.65□□□□□ -1.51
USP3-211ENST00000559257 NOTCH2NLQ7Z3S9 236 aa5.64□□□□□ -1.51
USP3-211ENST00000559257 ODF3BA8MYP8 253 aa5.64□□□□□ -1.51
USP3-211ENST00000559257 RTL8CO15255 209 aa5.64□□□□□ -1.51
USP3-211ENST00000559257 C10orf25Q5T742 122 aa5.64□□□□□ -1.51
USP3-211ENST00000559257 Q8NAQ8 132 aa5.64□□□□□ -1.51
USP3-211ENST00000559257 PRUNE2Q8WUY3 3088 aa5.64□□□□□ -1.51
USP3-211ENST00000559257 DEFB1P60022 68 aa5.63□□□□□ -1.51
USP3-211ENST00000559257 Q6ZQY7 126 aa5.63□□□□□ -1.51
USP3-211ENST00000559257 ADM2Q7Z4H4 148 aa5.63□□□□□ -1.51
USP3-211ENST00000559257 ST20-AS1Q8NBB2 130 aa5.63□□□□□ -1.51
USP3-211ENST00000559257 IGHV4-30-4P0DP06 118 aa5.63□□□□□ -1.51
USP3-211ENST00000559257 MINOS1Q5TGZ0 78 aa5.63□□□□□ -1.51
USP3-211ENST00000559257 LYPD2Q6UXB3 125 aa5.63□□□□□ -1.51
USP3-211ENST00000559257 SPINK7P58062 85 aa5.62□□□□□ -1.51
USP3-211ENST00000559257 HIGD2BQ4VC39 106 aa5.62□□□□□ -1.51
USP3-211ENST00000559257 Q8N9W7 124 aa5.62□□□□□ -1.51
USP3-211ENST00000559257 TOMM7Q9P0U1 55 aa5.62□□□□□ -1.51
USP3-211ENST00000559257 FAM186AA6NE01 2351 aa5.62□□□□□ -1.51
USP3-211ENST00000559257 PRB2P02812 416 aaPredicted RBP5.62□□□□□ -1.51
USP3-211ENST00000559257 PROK1P58294 105 aa5.62□□□□□ -1.51
USP3-211ENST00000559257 SPAG11BQ08648 103 aa5.62□□□□□ -1.51
USP3-211ENST00000559257 COA5Q86WW8 74 aa5.62□□□□□ -1.51
USP3-211ENST00000559257 DPM3Q9P2X0 92 aa5.62□□□□□ -1.51
USP3-211ENST00000559257 SORL1Q92673 2214 aa5.62□□□□□ -1.51
USP3-211ENST00000559257 DEFB123Q8N688 67 aa5.61□□□□□ -1.51
USP3-211ENST00000559257 ODF3L2Q3SX64 289 aa5.6□□□□□ -1.51
USP3-211ENST00000559257 A0A1W2PNM2 257 aa5.6□□□□□ -1.51
USP3-211ENST00000559257 COX7A1P24310 79 aa5.6□□□□□ -1.51
USP3-211ENST00000559257 COX17Q14061 63 aa5.6□□□□□ -1.51
USP3-211ENST00000559257 DEFB124Q8NES8 71 aa5.6□□□□□ -1.51
USP3-211ENST00000559257 C19orf73Q9NVV2 129 aa5.59□□□□□ -1.51
USP3-211ENST00000559257 Q6ZSN1 163 aa5.59□□□□□ -1.52
USP3-211ENST00000559257 ZNF702PQ9H963 129 aa5.59□□□□□ -1.52
USP3-211ENST00000559257 LAMA1P25391 3075 aa5.57□□□□□ -1.52
USP3-211ENST00000559257 MGAQ8IWI9 3026 aa5.56□□□□□ -1.52
USP3-211ENST00000559257 DSCR9P59020 149 aa5.56□□□□□ -1.52
USP3-211ENST00000559257 C1orf134Q5TEV5 83 aa5.56□□□□□ -1.52
USP3-211ENST00000559257 C9orf163Q8N9P6 203 aa5.56□□□□□ -1.52
USP3-211ENST00000559257 KLK12Q9UKR0 248 aa5.56□□□□□ -1.52
USP3-211ENST00000559257 MINOS1-NBL1R4GNA1 71 aa5.56□□□□□ -1.52
USP3-211ENST00000559257 VPS13AQ96RL7 3174 aa5.56□□□□□ -1.52
USP3-211ENST00000559257 MUC3AQ02505 3323 aa5.56□□□□□ -1.52
USP3-211ENST00000559257 IGLV7-46A0A075B6I9 117 aa5.55□□□□□ -1.52
USP3-211ENST00000559257 Q8IZM0 81 aa5.55□□□□□ -1.52
USP3-211ENST00000559257 IGLV6-57P01721 117 aa5.55□□□□□ -1.52
USP3-211ENST00000559257 TRGV4A0A0C4DH28 118 aa5.54□□□□□ -1.52
USP3-211ENST00000559257 H0Y9P7 68 aa5.54□□□□□ -1.52
USP3-211ENST00000559257 ROMO1P60602 79 aa5.54□□□□□ -1.52
USP3-211ENST00000559257 ZDBF2Q9HCK1 2354 aa5.54□□□□□ -1.52
USP3-211ENST00000559257 ZFP36P26651 326 aaKnown RBP5.54□□□□□ -1.52
USP3-211ENST00000559257 CSAG1Q6PB30 78 aa5.54□□□□□ -1.52
USP3-211ENST00000559257 TRIOBPQ9H2D6 2365 aa5.53□□□□□ -1.52
USP3-211ENST00000559257 MAP6D1Q9H9H5 199 aa5.53□□□□□ -1.52
USP3-211ENST00000559257 LINC00959A0A1B0GUT2 108 aa5.52□□□□□ -1.53
USP3-211ENST00000559257 SPAG11AQ6PDA7 123 aa5.52□□□□□ -1.53
USP3-211ENST00000559257 RHPN1-AS1Q9BWJ2 59 aa5.52□□□□□ -1.53
USP3-211ENST00000559257 TRIOO75962 3097 aa5.52□□□□□ -1.53
USP3-211ENST00000559257 CUL9Q8IWT3 2517 aa5.52□□□□□ -1.53
USP3-211ENST00000559257 IGHV4-61A0A0C4DH41 118 aa5.52□□□□□ -1.53
USP3-211ENST00000559257 IGHV3-11P01762 117 aa5.52□□□□□ -1.53
USP3-211ENST00000559257 DEFB112Q30KQ8 113 aa5.52□□□□□ -1.53
USP3-211ENST00000559257 Q6ZR54 194 aa5.52□□□□□ -1.53
USP3-211ENST00000559257 WNK2Q9Y3S1 2297 aa5.52□□□□□ -1.53
USP3-211ENST00000559257 NBEAQ8NFP9 2946 aa5.51□□□□□ -1.53
USP3-211ENST00000559257 DSCR10P59022 87 aa5.51□□□□□ -1.53
USP3-211ENST00000559257 CHCHD10Q8WYQ3 142 aaPredicted RBP5.51□□□□□ -1.53
USP3-211ENST00000559257 SPINK13Q1W4C9 94 aa5.51□□□□□ -1.53
USP3-211ENST00000559257 ABCA4P78363 2273 aa5.5□□□□□ -1.53
USP3-211ENST00000559257 IGHV4-28A0A0C4DH34 117 aa5.5□□□□□ -1.53
USP3-211ENST00000559257 C11orf71Q6IPW1 123 aa5.5□□□□□ -1.53
USP3-211ENST00000559257 CFAP54Q96N23 3096 aa5.5□□□□□ -1.53
USP3-211ENST00000559257 MED13LQ71F56 2210 aa5.49□□□□□ -1.53
USP3-211ENST00000559257 DOPEY2Q9Y3R5 2298 aa5.49□□□□□ -1.53
USP3-211ENST00000559257 A8MTW9 85 aa5.49□□□□□ -1.53
USP3-211ENST00000559257 IGLV5-48A0A075B6I7 105 aa5.48□□□□□ -1.53
USP3-211ENST00000559257 IGKV2D-24A0A075B6R9 120 aa5.48□□□□□ -1.53
USP3-211ENST00000559257 KPRPQ5T749 579 aaPredicted RBP5.48□□□□□ -1.53
USP3-211ENST00000559257 XAGE1AQ9HD64 81 aa5.48□□□□□ -1.53
USP3-211ENST00000559257 IGKV3-7A0A075B6H7 116 aa5.47□□□□□ -1.53
USP3-211ENST00000559257 G3V318 75 aa5.47□□□□□ -1.53
USP3-211ENST00000559257 K7EQZ3 153 aa5.47□□□□□ -1.53
USP3-211ENST00000559257 SPATA8Q6RVD6 105 aa5.47□□□□□ -1.53
USP3-211ENST00000559257 Q8NDZ9 215 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms