RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 KIAA1644Q3SXP7 199 aa6.24□□□□□ -1.41
SPG11-214ENST00000558989 Q6ZUT4 128 aa6.24□□□□□ -1.41
SPG11-214ENST00000558989 SCXQ7RTU7 201 aa6.24□□□□□ -1.41
SPG11-214ENST00000558989 C15orf56Q8N910 161 aa6.24□□□□□ -1.41
SPG11-214ENST00000558989 OPRPNQ99935 248 aaPredicted RBP6.24□□□□□ -1.41
SPG11-214ENST00000558989 VPS25Q9BRG1 176 aa6.24□□□□□ -1.41
SPG11-214ENST00000558989 SEC11CQ9BY50 192 aa6.24□□□□□ -1.41
SPG11-214ENST00000558989 SPANXCQ9NY87 97 aa6.24□□□□□ -1.41
SPG11-214ENST00000558989 UBE2D4Q9Y2X8 147 aa6.24□□□□□ -1.41
SPG11-214ENST00000558989 IGLV5-39A0A0G2JS06 123 aa6.23□□□□□ -1.41
SPG11-214ENST00000558989 H0Y9J4 135 aa6.23□□□□□ -1.41
SPG11-214ENST00000558989 SMIM6P0DI80 62 aa6.23□□□□□ -1.41
SPG11-214ENST00000558989 CKS1BP61024 79 aa6.23□□□□□ -1.41
SPG11-214ENST00000558989 PMAIP1Q13794 54 aa6.23□□□□□ -1.41
SPG11-214ENST00000558989 FLG2Q5D862 2391 aaPredicted RBP6.23□□□□□ -1.41
SPG11-214ENST00000558989 SLPIP03973 132 aa6.22□□□□□ -1.41
SPG11-214ENST00000558989 LINC00310P59036 64 aa6.22□□□□□ -1.41
SPG11-214ENST00000558989 BATFQ16520 125 aa6.22□□□□□ -1.41
SPG11-214ENST00000558989 C10orf91Q5T1B1 145 aa6.22□□□□□ -1.41
SPG11-214ENST00000558989 Q6ZSA8 131 aa6.22□□□□□ -1.41
SPG11-214ENST00000558989 C9orf163Q8N9P6 203 aa6.22□□□□□ -1.41
SPG11-214ENST00000558989 DPH3Q96FX2 82 aa6.22□□□□□ -1.41
SPG11-214ENST00000558989 IMMP2LQ96T52 175 aa6.22□□□□□ -1.41
SPG11-214ENST00000558989 RPS10P5Q9NQ39 176 aa6.22□□□□□ -1.41
SPG11-214ENST00000558989 PANO1I0J062 215 aa6.21□□□□□ -1.42
SPG11-214ENST00000558989 CIRBP-AS1Q8TBR5 109 aa6.21□□□□□ -1.42
SPG11-214ENST00000558989 PHOX2AO14813 284 aa6.2□□□□□ -1.42
SPG11-214ENST00000558989 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
SPG11-214ENST00000558989 INAFM2P0DMQ5 153 aa6.2□□□□□ -1.42
SPG11-214ENST00000558989 DDTP30046 118 aa6.2□□□□□ -1.42
SPG11-214ENST00000558989 PRSS3P2Q8NHM4 247 aa6.2□□□□□ -1.42
SPG11-214ENST00000558989 CHAC1Q9BUX1 264 aa6.2□□□□□ -1.42
SPG11-214ENST00000558989 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.2□□□□□ -1.42
SPG11-214ENST00000558989 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.2□□□□□ -1.42
SPG11-214ENST00000558989 C5orf38Q86SI9 138 aa6.2□□□□□ -1.42
SPG11-214ENST00000558989 IGHV3-64A0A075B6Q5 118 aa6.19□□□□□ -1.42
SPG11-214ENST00000558989 C1orf196B1AJZ1 125 aa6.19□□□□□ -1.42
SPG11-214ENST00000558989 APOC3P02656 99 aa6.19□□□□□ -1.42
SPG11-214ENST00000558989 PKIGQ9Y2B9 76 aa6.19□□□□□ -1.42
SPG11-214ENST00000558989 IGKV2-24A0A0C4DH68 120 aa6.18□□□□□ -1.42
SPG11-214ENST00000558989 C8orf87E5RJ46 101 aa6.18□□□□□ -1.42
SPG11-214ENST00000558989 IFI27P40305 119 aaPredicted RBP6.18□□□□□ -1.42
SPG11-214ENST00000558989 CNBPP62633 177 aaKnown RBP6.18□□□□□ -1.42
SPG11-214ENST00000558989 COX6A2Q02221 97 aa6.18□□□□□ -1.42
SPG11-214ENST00000558989 ZC2HC1BQ5TFG8 222 aa6.18□□□□□ -1.42
SPG11-214ENST00000558989 SDIM1Q6ZPB5 146 aa6.18□□□□□ -1.42
SPG11-214ENST00000558989 Q8N8P6 123 aa6.18□□□□□ -1.42
SPG11-214ENST00000558989 IGHV1-58A0A0C4DH39 117 aa6.18□□□□□ -1.42
SPG11-214ENST00000558989 IFITM10A6NMD0 228 aa6.18□□□□□ -1.42
SPG11-214ENST00000558989 FAM104AQ969W3 186 aa6.18□□□□□ -1.42
SPG11-214ENST00000558989 TIMM21Q9BVV7 248 aa6.18□□□□□ -1.42
SPG11-214ENST00000558989 GVQW2A0A096LPI5 108 aaPredicted RBP6.17□□□□□ -1.42
SPG11-214ENST00000558989 COX7A2LO14548 114 aa6.17□□□□□ -1.42
SPG11-214ENST00000558989 NDUFS5O43920 106 aa6.17□□□□□ -1.42
SPG11-214ENST00000558989 C2orf66Q6UXQ4 117 aa6.17□□□□□ -1.42
SPG11-214ENST00000558989 SVBPQ8N300 66 aa6.17□□□□□ -1.42
SPG11-214ENST00000558989 LAMTOR2Q9Y2Q5 125 aa6.17□□□□□ -1.42
SPG11-214ENST00000558989 FABP9Q0Z7S8 132 aa6.16□□□□□ -1.42
SPG11-214ENST00000558989 RHEBQ15382 184 aa6.16□□□□□ -1.42
SPG11-214ENST00000558989 IGLV4-69A0A075B6H9 119 aa6.15□□□□□ -1.42
SPG11-214ENST00000558989 IGLV4-3A0A075B6K6 122 aa6.15□□□□□ -1.42
SPG11-214ENST00000558989 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.42
SPG11-214ENST00000558989 SCGB1D4Q6XE38 83 aa6.15□□□□□ -1.42
SPG11-214ENST00000558989 TEX43Q6ZNM6 134 aa6.15□□□□□ -1.42
SPG11-214ENST00000558989 FA2HQ7L5A8 372 aa6.15□□□□□ -1.42
SPG11-214ENST00000558989 GNB1LQ9BYB4 327 aa6.15□□□□□ -1.42
SPG11-214ENST00000558989 CYSLTR1Q9Y271 337 aa6.15□□□□□ -1.42
SPG11-214ENST00000558989 SRRM2Q9UQ35 2752 aaKnown RBP6.15□□□□□ -1.42
SPG11-214ENST00000558989 TRAV9-1A0A075B6T8 112 aa6.15□□□□□ -1.43
SPG11-214ENST00000558989 FAM236DA0A1B0GTK5 79 aa6.15□□□□□ -1.43
SPG11-214ENST00000558989 FAM236CP0DP71 79 aa6.15□□□□□ -1.43
SPG11-214ENST00000558989 ORMDL2Q53FV1 153 aa6.15□□□□□ -1.43
SPG11-214ENST00000558989 TMEM141Q96I45 108 aa6.15□□□□□ -1.43
SPG11-214ENST00000558989 CARD19Q96LW7 228 aa6.15□□□□□ -1.43
SPG11-214ENST00000558989 TMEM126AQ9H061 195 aa6.15□□□□□ -1.43
SPG11-214ENST00000558989 VPS13BQ7Z7G8 4022 aa6.15□□□□□ -1.43
SPG11-214ENST00000558989 A0A087WYN8 130 aa6.14□□□□□ -1.43
SPG11-214ENST00000558989 PSMB2P49721 201 aa6.14□□□□□ -1.43
SPG11-214ENST00000558989 MRPS36P82909 103 aaKnown RBP6.14□□□□□ -1.43
SPG11-214ENST00000558989 SYCNQ0VAF6 134 aa6.14□□□□□ -1.43
SPG11-214ENST00000558989 ORAOV1Q8WV07 137 aa6.14□□□□□ -1.43
SPG11-214ENST00000558989 CAMK2N2Q96S95 79 aa6.14□□□□□ -1.43
SPG11-214ENST00000558989 NXT2Q9NPJ8 142 aaKnown RBP6.14□□□□□ -1.43
SPG11-214ENST00000558989 A0A096LNI7 61 aa6.13□□□□□ -1.43
SPG11-214ENST00000558989 A0A0J9YXV3 536 aa6.13□□□□□ -1.43
SPG11-214ENST00000558989 SPAG11BQ08648 103 aa6.13□□□□□ -1.43
SPG11-214ENST00000558989 Q6ZRU5 148 aa6.13□□□□□ -1.43
SPG11-214ENST00000558989 PSPHP1O15172 72 aa6.13□□□□□ -1.43
SPG11-214ENST00000558989 APOMO95445 188 aa6.13□□□□□ -1.43
SPG11-214ENST00000558989 SPACA4Q8TDM5 124 aa6.13□□□□□ -1.43
SPG11-214ENST00000558989 C14orf144Q96I85 54 aa6.13□□□□□ -1.43
SPG11-214ENST00000558989 TRAPPC1Q9Y5R8 145 aa6.13□□□□□ -1.43
SPG11-214ENST00000558989 RPL37AP61513 92 aaKnown RBP6.12□□□□□ -1.43
SPG11-214ENST00000558989 STPG4Q8N801 248 aa6.12□□□□□ -1.43
SPG11-214ENST00000558989 PYGO1Q9Y3Y4 419 aa6.12□□□□□ -1.43
SPG11-214ENST00000558989 A0A1B0GX51 115 aa6.11□□□□□ -1.43
SPG11-214ENST00000558989 LINC00173Q6ZV60 143 aa6.11□□□□□ -1.43
SPG11-214ENST00000558989 SMCO4Q9NRQ5 59 aa6.11□□□□□ -1.43
SPG11-214ENST00000558989 HSPB8Q9UJY1 196 aa6.11□□□□□ -1.43
SPG11-214ENST00000558989 MT-ND6P03923 174 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms