RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 SSPOA2VEC9 5147 aa3.79□□□□□ -1.8
LRRC28-207ENST00000558500 ZNF727A8MUV8 499 aa3.79□□□□□ -1.8
LRRC28-207ENST00000558500 KIR2DL4Q99706 377 aa3.79□□□□□ -1.8
LRRC28-207ENST00000558500 TMEM191AQ9H0A3 160 aa3.79□□□□□ -1.8
LRRC28-207ENST00000558500 XAGE1AQ9HD64 81 aa3.79□□□□□ -1.8
LRRC28-207ENST00000558500 MED9Q9NWA0 146 aa3.79□□□□□ -1.8
LRRC28-207ENST00000558500 NDUFA13Q9P0J0 144 aa3.79□□□□□ -1.8
LRRC28-207ENST00000558500 USH2AO75445 5202 aa3.78□□□□□ -1.8
LRRC28-207ENST00000558500 TGIF2-C20orf24A0A0A6YYL0 155 aa3.78□□□□□ -1.8
LRRC28-207ENST00000558500 IFITM10A6NMD0 228 aa3.78□□□□□ -1.8
LRRC28-207ENST00000558500 SMKR1H3BMG3 65 aa3.78□□□□□ -1.8
LRRC28-207ENST00000558500 K7EN84 100 aa3.78□□□□□ -1.8
LRRC28-207ENST00000558500 ARPC5O15511 151 aa3.78□□□□□ -1.8
LRRC28-207ENST00000558500 PDE6DO43924 150 aa3.78□□□□□ -1.8
LRRC28-207ENST00000558500 RAB4AP20338 218 aa3.78□□□□□ -1.8
LRRC28-207ENST00000558500 UBE2AP49459 152 aa3.78□□□□□ -1.8
LRRC28-207ENST00000558500 HBBP68871 147 aa3.78□□□□□ -1.8
LRRC28-207ENST00000558500 SPAG11AQ6PDA7 123 aa3.78□□□□□ -1.8
LRRC28-207ENST00000558500 C3orf22Q8N5N4 141 aa3.78□□□□□ -1.8
LRRC28-207ENST00000558500 LINC00167Q96N53 147 aa3.78□□□□□ -1.8
LRRC28-207ENST00000558500 RPL37AP8A6NKH3 93 aa3.77□□□□□ -1.81
LRRC28-207ENST00000558500 RPL39P62891 51 aaKnown RBP3.77□□□□□ -1.81
LRRC28-207ENST00000558500 MRPS36P82909 103 aaKnown RBP3.77□□□□□ -1.81
LRRC28-207ENST00000558500 AMN1Q8IY45 258 aa3.77□□□□□ -1.81
LRRC28-207ENST00000558500 NRACQ8N912 160 aa3.77□□□□□ -1.81
LRRC28-207ENST00000558500 SPANXA1Q9NS26 97 aa3.77□□□□□ -1.81
LRRC28-207ENST00000558500 A0A1B0GVG6 124 aa3.76□□□□□ -1.81
LRRC28-207ENST00000558500 A8MWL6 223 aa3.76□□□□□ -1.81
LRRC28-207ENST00000558500 GATCO43716 136 aaKnown RBP3.76□□□□□ -1.81
LRRC28-207ENST00000558500 PPP1R17O96001 155 aa3.76□□□□□ -1.81
LRRC28-207ENST00000558500 BORCS7Q96B45 105 aa3.76□□□□□ -1.81
LRRC28-207ENST00000558500 A0A1B0GUT8 65 aa3.75□□□□□ -1.81
LRRC28-207ENST00000558500 PPP1R2P9O14990 202 aa3.75□□□□□ -1.81
LRRC28-207ENST00000558500 CKS1BP61024 79 aa3.75□□□□□ -1.81
LRRC28-207ENST00000558500 RPL32P62910 135 aaKnown RBP3.75□□□□□ -1.81
LRRC28-207ENST00000558500 LINC01561Q8N1V8 128 aa3.75□□□□□ -1.81
LRRC28-207ENST00000558500 TCAPO15273 167 aa3.74□□□□□ -1.81
LRRC28-207ENST00000558500 PRSS2P07478 247 aa3.74□□□□□ -1.81
LRRC28-207ENST00000558500 PRLHP81277 87 aa3.74□□□□□ -1.81
LRRC28-207ENST00000558500 C6orf226Q5I0X4 101 aa3.74□□□□□ -1.81
LRRC28-207ENST00000558500 FAM231DQ6ZW35 169 aa3.74□□□□□ -1.81
LRRC28-207ENST00000558500 DAND5Q8N907 189 aa3.74□□□□□ -1.81
LRRC28-207ENST00000558500 PLEKHB2Q96CS7 222 aa3.74□□□□□ -1.81
LRRC28-207ENST00000558500 TOMM7Q9P0U1 55 aa3.74□□□□□ -1.81
LRRC28-207ENST00000558500 IGLV5-37A0A075B6J1 123 aa3.73□□□□□ -1.81
LRRC28-207ENST00000558500 HIGD1CA8MV81 97 aa3.73□□□□□ -1.81
LRRC28-207ENST00000558500 M0R2T5 61 aa3.73□□□□□ -1.81
LRRC28-207ENST00000558500 ZNF345Q14585 488 aa3.73□□□□□ -1.81
LRRC28-207ENST00000558500 Q8IZM0 81 aa3.73□□□□□ -1.81
LRRC28-207ENST00000558500 C20orf78Q9BR46 151 aa3.73□□□□□ -1.81
LRRC28-207ENST00000558500 FCGBPQ9Y6R7 5405 aaPredicted RBP3.72□□□□□ -1.81
LRRC28-207ENST00000558500 TRBV24-1A0A075B6N3 115 aa3.72□□□□□ -1.81
LRRC28-207ENST00000558500 IGKV2-28A0A075B6P5 120 aa3.72□□□□□ -1.81
LRRC28-207ENST00000558500 F8VRH5 84 aa3.72□□□□□ -1.81
LRRC28-207ENST00000558500 TEX46H3BTG2 121 aa3.72□□□□□ -1.81
LRRC28-207ENST00000558500 IGKV2D-28P01615 120 aa3.72□□□□□ -1.81
LRRC28-207ENST00000558500 MRPL51Q4U2R6 128 aaKnown RBP3.72□□□□□ -1.81
LRRC28-207ENST00000558500 Q6ZN92 141 aa3.72□□□□□ -1.81
LRRC28-207ENST00000558500 FAM19A1Q7Z5A9 133 aa3.72□□□□□ -1.81
LRRC28-207ENST00000558500 IGLV8-61A0A075B6I0 122 aa3.71□□□□□ -1.82
LRRC28-207ENST00000558500 IGLV4-3A0A075B6K6 122 aa3.71□□□□□ -1.82
LRRC28-207ENST00000558500 SMLR1H3BR10 107 aa3.71□□□□□ -1.82
LRRC28-207ENST00000558500 SPINK1P00995 79 aa3.71□□□□□ -1.82
LRRC28-207ENST00000558500 IFI27P40305 119 aaPredicted RBP3.71□□□□□ -1.82
LRRC28-207ENST00000558500 RPL24P83731 157 aaKnown RBP3.71□□□□□ -1.82
LRRC28-207ENST00000558500 FAM104BQ5XKR9 115 aa3.71□□□□□ -1.82
LRRC28-207ENST00000558500 NKAPP1Q8N9T2 125 aa3.71□□□□□ -1.82
LRRC28-207ENST00000558500 Q8NBF4 154 aa3.71□□□□□ -1.82
LRRC28-207ENST00000558500 ALKBH7Q9BT30 221 aaPredicted RBP3.71□□□□□ -1.82
LRRC28-207ENST00000558500 SMIM2Q9BVW6 85 aa3.71□□□□□ -1.82
LRRC28-207ENST00000558500 NDUFA12Q9UI09 145 aa3.71□□□□□ -1.82
LRRC28-207ENST00000558500 PYGO1Q9Y3Y4 419 aa3.71□□□□□ -1.82
LRRC28-207ENST00000558500 KANTRA0A1W2PQU2 76 aa3.7□□□□□ -1.82
LRRC28-207ENST00000558500 LINC00862A6NCI5 91 aa3.7□□□□□ -1.82
LRRC28-207ENST00000558500 SCO1O75880 301 aa3.7□□□□□ -1.82
LRRC28-207ENST00000558500 RIGQ13278 110 aa3.7□□□□□ -1.82
LRRC28-207ENST00000558500 TEX43Q6ZNM6 134 aa3.7□□□□□ -1.82
LRRC28-207ENST00000558500 CBLN2Q8IUK8 224 aa3.7□□□□□ -1.82
LRRC28-207ENST00000558500 TMEM141Q96I45 108 aa3.7□□□□□ -1.82
LRRC28-207ENST00000558500 SPRR4Q96PI1 79 aa3.7□□□□□ -1.82
LRRC28-207ENST00000558500 GNB1LQ9BYB4 327 aa3.7□□□□□ -1.82
LRRC28-207ENST00000558500 TMEM126AQ9H061 195 aa3.7□□□□□ -1.82
LRRC28-207ENST00000558500 HMSDA8MTL9 139 aa3.69□□□□□ -1.82
LRRC28-207ENST00000558500 TMEM238C9JI98 176 aa3.69□□□□□ -1.82
LRRC28-207ENST00000558500 CKS2P33552 79 aa3.69□□□□□ -1.82
LRRC28-207ENST00000558500 TAGLN2P37802 199 aaKnown RBP3.69□□□□□ -1.82
LRRC28-207ENST00000558500 PCOTHQ58A44 107 aa3.69□□□□□ -1.82
LRRC28-207ENST00000558500 ZC2HC1BQ5TFG8 222 aa3.69□□□□□ -1.82
LRRC28-207ENST00000558500 FAM19A2Q8N3H0 131 aa3.69□□□□□ -1.82
LRRC28-207ENST00000558500 C2orf88Q9BSF0 95 aa3.69□□□□□ -1.82
LRRC28-207ENST00000558500 EIF5A2Q9GZV4 153 aaKnown RBP3.69□□□□□ -1.82
LRRC28-207ENST00000558500 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
LRRC28-207ENST00000558500 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
LRRC28-207ENST00000558500 M0R378 163 aa3.68□□□□□ -1.82
LRRC28-207ENST00000558500 CXCL5P42830 114 aa3.68□□□□□ -1.82
LRRC28-207ENST00000558500 RPS29P62273 56 aaKnown RBP3.68□□□□□ -1.82
LRRC28-207ENST00000558500 FAM19A3Q7Z5A8 133 aa3.68□□□□□ -1.82
LRRC28-207ENST00000558500 Q8N377 158 aa3.68□□□□□ -1.82
LRRC28-207ENST00000558500 HIGD2AQ9BW72 106 aa3.68□□□□□ -1.82
LRRC28-207ENST00000558500 TMEM250H0YL14 139 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms