RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SRRM2Q9UQ35 2752 aaKnown RBP5.38□□□□□ -1.55
TPM1-213ENST00000558400 VPS13BQ7Z7G8 4022 aa5.38□□□□□ -1.55
TPM1-213ENST00000558400 A0A096LNI7 61 aa5.37□□□□□ -1.55
TPM1-213ENST00000558400 LOC105371267A0A1B0GV96 52 aa5.37□□□□□ -1.55
TPM1-213ENST00000558400 TINCRA0A1B0GVN0 87 aa5.37□□□□□ -1.55
TPM1-213ENST00000558400 PRSS2P07478 247 aa5.37□□□□□ -1.55
TPM1-213ENST00000558400 PTTG1IPP53801 180 aa5.37□□□□□ -1.55
TPM1-213ENST00000558400 GAGE2BQ13066 116 aa5.37□□□□□ -1.55
TPM1-213ENST00000558400 KIAA0087Q14695 138 aa5.37□□□□□ -1.55
TPM1-213ENST00000558400 PMVKQ15126 192 aa5.37□□□□□ -1.55
TPM1-213ENST00000558400 C6orf226Q5I0X4 101 aa5.37□□□□□ -1.55
TPM1-213ENST00000558400 ZC2HC1BQ5TFG8 222 aa5.37□□□□□ -1.55
TPM1-213ENST00000558400 PACRGQ96M98 296 aaPredicted RBP5.37□□□□□ -1.55
TPM1-213ENST00000558400 CST9LQ9H4G1 147 aa5.37□□□□□ -1.55
TPM1-213ENST00000558400 FAT1Q14517 4588 aa5.37□□□□□ -1.55
TPM1-213ENST00000558400 TRBV30A0A0K0K1B3 111 aa5.36□□□□□ -1.55
TPM1-213ENST00000558400 ATP5LO75964 103 aa5.36□□□□□ -1.55
TPM1-213ENST00000558400 HBDP02042 147 aa5.36□□□□□ -1.55
TPM1-213ENST00000558400 TRGC2P03986 189 aa5.36□□□□□ -1.55
TPM1-213ENST00000558400 TLX1NBP0CAT3 122 aa5.36□□□□□ -1.55
TPM1-213ENST00000558400 CKS1BP61024 79 aa5.36□□□□□ -1.55
TPM1-213ENST00000558400 Q8IZM0 81 aa5.36□□□□□ -1.55
TPM1-213ENST00000558400 CHCHD1Q96BP2 118 aaKnown RBP5.36□□□□□ -1.55
TPM1-213ENST00000558400 CDKN2A-AS1Q9UH64 79 aa5.36□□□□□ -1.55
TPM1-213ENST00000558400 A0A0J9YXV3 536 aa5.35□□□□□ -1.55
TPM1-213ENST00000558400 H3BRM9 83 aa5.35□□□□□ -1.55
TPM1-213ENST00000558400 PDZD11Q5EBL8 140 aa5.35□□□□□ -1.55
TPM1-213ENST00000558400 UNQ6190/PRO20217Q6UXQ8 127 aa5.35□□□□□ -1.55
TPM1-213ENST00000558400 LINC00469Q8N7U9 141 aa5.35□□□□□ -1.55
TPM1-213ENST00000558400 IGLV5-45A0A087WSX0 123 aa5.34□□□□□ -1.55
TPM1-213ENST00000558400 CXCL5P42830 114 aa5.34□□□□□ -1.55
TPM1-213ENST00000558400 NDUFA6P56556 154 aa5.34□□□□□ -1.55
TPM1-213ENST00000558400 RPL18AQ02543 176 aaKnown RBP5.34□□□□□ -1.55
TPM1-213ENST00000558400 URB1-AS1Q96HZ7 61 aa5.34□□□□□ -1.55
TPM1-213ENST00000558400 TOMM7Q9P0U1 55 aa5.34□□□□□ -1.55
TPM1-213ENST00000558400 NDUFC2-KCTD14E9PQ53 114 aa5.33□□□□□ -1.56
TPM1-213ENST00000558400 S100A6P06703 90 aa5.33□□□□□ -1.56
TPM1-213ENST00000558400 KRTAP10-4P60372 401 aaPredicted RBP5.33□□□□□ -1.56
TPM1-213ENST00000558400 C10orf25Q5T742 122 aa5.33□□□□□ -1.56
TPM1-213ENST00000558400 SERTAD4-AS1Q5TG53 156 aa5.33□□□□□ -1.56
TPM1-213ENST00000558400 BAGE3Q86Y29 109 aa5.33□□□□□ -1.56
TPM1-213ENST00000558400 C6orf48Q9UBA6 75 aa5.33□□□□□ -1.56
TPM1-213ENST00000558400 A0A096LNJ9 63 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 KRTAP29-1A8MX34 341 aaPredicted RBP5.32□□□□□ -1.56
TPM1-213ENST00000558400 F8VRH5 84 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 HIST1H2BKO60814 126 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 OXTP01178 125 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 HIST1H2BJP06899 126 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 HIST1H2BOP23527 126 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 HIST1H2BBP33778 126 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 HIST1H2BDP58876 126 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 SNRPEP62304 92 aaKnown RBP5.32□□□□□ -1.56
TPM1-213ENST00000558400 HIST1H2BCP62807 126 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 HIST2H2BEQ16778 126 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 C9orf116Q5BN46 136 aaPredicted RBP5.32□□□□□ -1.56
TPM1-213ENST00000558400 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.32□□□□□ -1.56
TPM1-213ENST00000558400 C2orf82Q6UX34 121 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 Q6ZRP5 223 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 HIST1H2BHQ93079 126 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 HIST1H2BNQ99877 126 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 HIST1H2BMQ99879 126 aa5.32□□□□□ -1.56
TPM1-213ENST00000558400 A0A1W2PNN7 141 aa5.31□□□□□ -1.56
TPM1-213ENST00000558400 SMIM1B2RUZ4 78 aa5.31□□□□□ -1.56
TPM1-213ENST00000558400 HSBP1O75506 76 aa5.31□□□□□ -1.56
TPM1-213ENST00000558400 IGLC3P0DOY3 106 aa5.31□□□□□ -1.56
TPM1-213ENST00000558400 AKR1D1P51857 326 aa5.31□□□□□ -1.56
TPM1-213ENST00000558400 GAGE2EQ4V326 116 aa5.31□□□□□ -1.56
TPM1-213ENST00000558400 COX7B2Q8TF08 81 aa5.31□□□□□ -1.56
TPM1-213ENST00000558400 GAGE2DQ9UEU5 116 aa5.31□□□□□ -1.56
TPM1-213ENST00000558400 ODF1Q14990 250 aa5.3□□□□□ -1.56
TPM1-213ENST00000558400 PMCHL1Q16048 86 aa5.3□□□□□ -1.56
TPM1-213ENST00000558400 IFI27L1Q96BM0 104 aa5.3□□□□□ -1.56
TPM1-213ENST00000558400 TRAV12-1A0A0B4J245 112 aa5.29□□□□□ -1.56
TPM1-213ENST00000558400 SPINK8P0C7L1 97 aa5.29□□□□□ -1.56
TPM1-213ENST00000558400 SFTA2Q6UW10 78 aa5.29□□□□□ -1.56
TPM1-213ENST00000558400 PLA2G2DQ9UNK4 145 aa5.29□□□□□ -1.56
TPM1-213ENST00000558400 CHTOPQ9Y3Y2 248 aaKnown RBP5.29□□□□□ -1.56
TPM1-213ENST00000558400 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
TPM1-213ENST00000558400 C5orf52A6NGY3 159 aa5.28□□□□□ -1.56
TPM1-213ENST00000558400 PRR3P79522 188 aaKnown RBP5.28□□□□□ -1.56
TPM1-213ENST00000558400 TMEM170BQ5T4T1 132 aa5.28□□□□□ -1.56
TPM1-213ENST00000558400 SPINK6Q6UWN8 80 aa5.28□□□□□ -1.56
TPM1-213ENST00000558400 IGLV5-39A0A0G2JS06 123 aa5.27□□□□□ -1.57
TPM1-213ENST00000558400 LEPROTL1O95214 131 aa5.27□□□□□ -1.57
TPM1-213ENST00000558400 ZNF22P17026 224 aaPredicted RBP5.27□□□□□ -1.57
TPM1-213ENST00000558400 HIST3H2BBQ8N257 126 aa5.27□□□□□ -1.57
TPM1-213ENST00000558400 FAM19A2Q8N3H0 131 aa5.27□□□□□ -1.57
TPM1-213ENST00000558400 HSPB8Q9UJY1 196 aa5.27□□□□□ -1.57
TPM1-213ENST00000558400 C11orf86A6NJI1 115 aa5.26□□□□□ -1.57
TPM1-213ENST00000558400 SERF1AO75920 110 aa5.26□□□□□ -1.57
TPM1-213ENST00000558400 SRSF9Q13242 221 aaKnown RBP eCLIP5.26□□□□□ -1.57
TPM1-213ENST00000558400 COX17Q14061 63 aa5.26□□□□□ -1.57
TPM1-213ENST00000558400 LBHQ53QV2 105 aaPredicted RBP5.26□□□□□ -1.57
TPM1-213ENST00000558400 C9orf129Q5T035 196 aaKnown RBP5.26□□□□□ -1.57
TPM1-213ENST00000558400 PHF5AQ7RTV0 110 aaKnown RBP5.26□□□□□ -1.57
TPM1-213ENST00000558400 DNAH8Q96JB1 4490 aa5.25□□□□□ -1.57
TPM1-213ENST00000558400 FAM168BA1KXE4 195 aa5.25□□□□□ -1.57
TPM1-213ENST00000558400 FABP4P15090 132 aa5.25□□□□□ -1.57
TPM1-213ENST00000558400 S100A2P29034 98 aa5.25□□□□□ -1.57
TPM1-213ENST00000558400 HNRNPA3P51991 378 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms