RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 PRO1933Q9H354 126 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 DPH3P1Q9H4G8 78 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 PSENENQ9NZ42 101 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 TRAV12-2A0A075B6T6 113 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 TEX49A0A1B0GTD5 131 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 F8W1H4 67 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 GNG7O60262 68 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 CYB5AP00167 134 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 S100A10P60903 97 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 KLKP1Q107X0 134 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 MRPL54Q6P161 138 aaKnown RBP0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 USMG5Q96IX5 58 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 TMEM191AQ9H0A3 160 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 SMCO4Q9NRQ5 59 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 CCDC167Q9P0B6 97 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 NDUFA12Q9UI09 145 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 UBE2D4Q9Y2X8 147 aa0.58□□□□□ -2.32
CTDSPL2-202ENST00000558373 ZNF407Q9C0G0 2248 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 DSCAML1Q8TD84 2053 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 MED13Q9UHV7 2174 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 TRAV3A0A0B4J244 114 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 JMJD7-PLA2G4BH0Y9G9 81 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 C3orf79P0CE67 100 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 RNASE3P12724 160 aaKnown RBP0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 UBE2D1P51668 147 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 PEA15Q15121 130 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 SPATA45Q537H7 98 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 NMSQ5H8A3 153 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 KRTAP13-1Q8IUC0 172 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 FAM19A2Q8N3H0 131 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 CDC42SE1Q9NRR8 79 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 CABIN1Q9Y6J0 2220 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 DOPEY1Q5JWR5 2465 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 NAV3Q8IVL0 2385 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 OOSP1A8MZH6 123 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 K7EQZ3 153 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 M0R129 80 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 NPFFO15130 113 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 NDUFB6O95139 128 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 GUCA1AP43080 201 aaPredicted RBP0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 VAMP8Q9BV40 100 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 CMC2Q9NRP2 79 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 HIGD1BQ9P298 99 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 PLXNB1O43157 2135 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 GPR179Q6PRD1 2367 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 TRBV7-3A0A075B6L6 115 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 F2Z2F3 143 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 K7ERU9 68 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 CCL16O15467 120 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 IGLV3-1P01715 115 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 GYPAP02724 150 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 COX6B1P14854 86 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 CKS2P33552 79 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 CATR1Q13166 79 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 IQCJQ1A5X6 159 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 ZNF818PQ6ZRF7 136 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 DMAC1Q96GE9 116 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 NDUFA4L2Q9NRX3 87 aa0.57□□□□□ -2.32
CTDSPL2-202ENST00000558373 MED12Q93074 2177 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 TRAV1-2A0A0B4J238 106 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 TRBV7-4A0A0J9YYF1 115 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 H3BUX3 64 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 IGHV3-30P01768 117 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 APOC3P02656 99 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 IGHV3-30-5P0DP03 117 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 DEFA4P12838 97 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 DEFA1P59665 94 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 ROMO1P60602 79 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 GNG11P61952 73 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 DEFB113Q30KQ7 82 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 Q86TA4 180 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 CLECL1Q8IZS7 167 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 A0A0J9YY99 117 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 RBAKDNA6NC62 111 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 NDUFC1O43677 76 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 ASIPP42127 132 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 CNBPP62633 177 aaKnown RBP0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 UBA52P62987 128 aaKnown RBP0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 C10orf99Q6UWK7 81 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 Q8N8P6 123 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 C9orf163Q8N9P6 203 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 C15orf53Q8NAA6 179 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 BRK1Q8WUW1 75 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 SMIM4Q8WVI0 70 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 PRR15LQ9BU68 103 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 TRAV23DV6A0A075B6W5 121 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 TMEM30CPA0ZSE6 113 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 NDUFB1O75438 58 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 IGLV1-51P01701 117 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 SLC25A5P05141 298 aaKnown RBP0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 CBLN1P23435 193 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 PCBD1P61457 104 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 BLCAPP62952 87 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 SPANXN1Q5VSR9 72 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 S100A13Q99584 98 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 PMCHL2Q9BQD1 86 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 PDCD10Q9BUL8 212 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 MUC5ACP98088 5654 aa0.56□□□□□ -2.32
CTDSPL2-202ENST00000558373 DOCK8Q8NF50 2099 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms