RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 TRAV12-2A0A075B6T6 113 aa5.73□□□□□ -1.49
RTF1-205ENST00000558298 IGHV3-66A0A0C4DH42 116 aa5.73□□□□□ -1.49
RTF1-205ENST00000558298 A0A0J9YXV3 536 aa5.73□□□□□ -1.49
RTF1-205ENST00000558298 JMJD7-PLA2G4BH0Y9G9 81 aa5.73□□□□□ -1.49
RTF1-205ENST00000558298 RPL28P46779 137 aaKnown RBP5.73□□□□□ -1.49
RTF1-205ENST00000558298 DEFB131AP59861 70 aa5.73□□□□□ -1.49
RTF1-205ENST00000558298 RPL11P62913 178 aaKnown RBP5.73□□□□□ -1.49
RTF1-205ENST00000558298 IGFL4Q6B9Z1 124 aa5.73□□□□□ -1.49
RTF1-205ENST00000558298 FAM19A3Q7Z5A8 133 aa5.73□□□□□ -1.49
RTF1-205ENST00000558298 CLEC2BQ92478 149 aa5.73□□□□□ -1.49
RTF1-205ENST00000558298 LAMTOR3Q9UHA4 124 aa5.73□□□□□ -1.49
RTF1-205ENST00000558298 LOC107984640A0A0U1RRK4 108 aa5.72□□□□□ -1.49
RTF1-205ENST00000558298 LINC00308Q8TCZ7 52 aa5.72□□□□□ -1.49
RTF1-205ENST00000558298 OBSCN-AS1Q96MR7 158 aa5.72□□□□□ -1.49
RTF1-205ENST00000558298 DYNC2H1Q8NCM8 4307 aaKnown RBP5.71□□□□□ -1.5
RTF1-205ENST00000558298 USP17L23D6RBM5 183 aa5.71□□□□□ -1.5
RTF1-205ENST00000558298 CRPP02741 224 aa5.71□□□□□ -1.5
RTF1-205ENST00000558298 PRR9Q5T870 116 aa5.71□□□□□ -1.5
RTF1-205ENST00000558298 STHQ8IWL8 128 aa5.71□□□□□ -1.5
RTF1-205ENST00000558298 UPK3BQ9BT76 320 aa5.71□□□□□ -1.5
RTF1-205ENST00000558298 SACSQ9NZJ4 4579 aa5.7□□□□□ -1.5
RTF1-205ENST00000558298 IGKV3-7A0A075B6H7 116 aa5.7□□□□□ -1.5
RTF1-205ENST00000558298 SMIM26A0A096LP01 95 aa5.7□□□□□ -1.5
RTF1-205ENST00000558298 IGLV5-39A0A0G2JS06 123 aa5.7□□□□□ -1.5
RTF1-205ENST00000558298 FAM236DA0A1B0GTK5 79 aa5.7□□□□□ -1.5
RTF1-205ENST00000558298 GIG44P09565 113 aaPredicted RBP5.7□□□□□ -1.5
RTF1-205ENST00000558298 RBMY1A1P0DJD3 496 aaKnown RBP5.7□□□□□ -1.5
RTF1-205ENST00000558298 RBMY1CP0DJD4 496 aa5.7□□□□□ -1.5
RTF1-205ENST00000558298 FAM236CP0DP71 79 aa5.7□□□□□ -1.5
RTF1-205ENST00000558298 RBMY1FQ15415 496 aaKnown RBP5.7□□□□□ -1.5
RTF1-205ENST00000558298 SMCR5Q8TEV8 140 aa5.7□□□□□ -1.5
RTF1-205ENST00000558298 C11orf68Q9H3H3 251 aaKnown RBP5.7□□□□□ -1.5
RTF1-205ENST00000558298 JPT2Q9H910 190 aa5.7□□□□□ -1.5
RTF1-205ENST00000558298 KLK5Q9Y337 293 aaPredicted RBP5.7□□□□□ -1.5
RTF1-205ENST00000558298 LYSTQ99698 3801 aa5.7□□□□□ -1.5
RTF1-205ENST00000558298 IGHV1OR15-1A0A075B7D0 117 aa5.69□□□□□ -1.5
RTF1-205ENST00000558298 IGHV3-16A0A0C4DH30 117 aa5.69□□□□□ -1.5
RTF1-205ENST00000558298 GHRHP01286 108 aa5.69□□□□□ -1.5
RTF1-205ENST00000558298 CEMP1Q6PRD7 247 aaPredicted RBP5.69□□□□□ -1.5
RTF1-205ENST00000558298 CSNK1G2-AS1Q8NCQ2 148 aa5.69□□□□□ -1.5
RTF1-205ENST00000558298 KNCNA6PVL3 124 aa5.68□□□□□ -1.5
RTF1-205ENST00000558298 EPM2AB3EWF7 344 aa5.68□□□□□ -1.5
RTF1-205ENST00000558298 GNRH2O43555 120 aa5.68□□□□□ -1.5
RTF1-205ENST00000558298 SPRY2O43597 315 aa5.68□□□□□ -1.5
RTF1-205ENST00000558298 PDE6GP18545 87 aa5.68□□□□□ -1.5
RTF1-205ENST00000558298 ADAMTSL4-AS1Q5T5F5 129 aa5.68□□□□□ -1.5
RTF1-205ENST00000558298 C20orf173Q96LM9 149 aa5.68□□□□□ -1.5
RTF1-205ENST00000558298 PLECQ15149 4684 aaKnown RBP5.68□□□□□ -1.5
RTF1-205ENST00000558298 C3orf84H3BNL1 204 aa5.67□□□□□ -1.5
RTF1-205ENST00000558298 MIFP14174 115 aa5.67□□□□□ -1.5
RTF1-205ENST00000558298 DEFB135Q30KP9 77 aa5.67□□□□□ -1.5
RTF1-205ENST00000558298 FAM74A4Q5TZK3 123 aa5.67□□□□□ -1.5
RTF1-205ENST00000558298 DGAT2L7PQ6IED9 249 aa5.67□□□□□ -1.5
RTF1-205ENST00000558298 IL17DQ8TAD2 202 aa5.67□□□□□ -1.5
RTF1-205ENST00000558298 MUC7Q8TAX7 377 aa5.67□□□□□ -1.5
RTF1-205ENST00000558298 TMEM243Q9BU79 118 aa5.67□□□□□ -1.5
RTF1-205ENST00000558298 UBL5Q9BZL1 73 aa5.67□□□□□ -1.5
RTF1-205ENST00000558298 UBE2D4Q9Y2X8 147 aa5.67□□□□□ -1.5
RTF1-205ENST00000558298 TRAV7A0A075B6U4 112 aa5.66□□□□□ -1.5
RTF1-205ENST00000558298 A0A087WWL8 130 aa5.66□□□□□ -1.5
RTF1-205ENST00000558298 CCKP06307 115 aa5.66□□□□□ -1.5
RTF1-205ENST00000558298 RPL35AP18077 110 aaKnown RBP5.66□□□□□ -1.5
RTF1-205ENST00000558298 PFN2P35080 140 aa5.66□□□□□ -1.5
RTF1-205ENST00000558298 CASC10Q5T4H9 136 aa5.66□□□□□ -1.5
RTF1-205ENST00000558298 Q8NAQ8 132 aa5.66□□□□□ -1.5
RTF1-205ENST00000558298 RETNQ9HD89 108 aa5.66□□□□□ -1.5
RTF1-205ENST00000558298 ORMDL1Q9P0S3 153 aa5.66□□□□□ -1.5
RTF1-205ENST00000558298 HYDINQ4G0P3 5121 aa5.66□□□□□ -1.5
RTF1-205ENST00000558298 IGHV3-64A0A075B6Q5 118 aa5.65□□□□□ -1.5
RTF1-205ENST00000558298 KLKP1Q107X0 134 aa5.65□□□□□ -1.5
RTF1-205ENST00000558298 Q5XG85 94 aa5.65□□□□□ -1.5
RTF1-205ENST00000558298 LYPD5Q6UWN5 251 aa5.65□□□□□ -1.5
RTF1-205ENST00000558298 LINC00467Q9BRT7 94 aa5.65□□□□□ -1.5
RTF1-205ENST00000558298 Q9H8V8 135 aa5.65□□□□□ -1.5
RTF1-205ENST00000558298 X6R8D5 127 aa5.65□□□□□ -1.5
RTF1-205ENST00000558298 TENM2Q9NT68 2774 aa5.64□□□□□ -1.51
RTF1-205ENST00000558298 TMEM256-PLSCR3K7ERE1 68 aa5.64□□□□□ -1.51
RTF1-205ENST00000558298 DNAH1Q9P2D7 4330 aa5.63□□□□□ -1.51
RTF1-205ENST00000558298 TRAV12-3A0A0B4J271 114 aa5.63□□□□□ -1.51
RTF1-205ENST00000558298 TRBV10-1A0A0K0K1A3 114 aa5.63□□□□□ -1.51
RTF1-205ENST00000558298 F6UB75 175 aa5.63□□□□□ -1.51
RTF1-205ENST00000558298 ERC2-IT1O76042 136 aa5.63□□□□□ -1.51
RTF1-205ENST00000558298 ZNF625Q96I27 306 aaPredicted RBP5.63□□□□□ -1.51
RTF1-205ENST00000558298 INSP01308 110 aa5.62□□□□□ -1.51
RTF1-205ENST00000558298 HRCT1Q6UXD1 115 aa5.62□□□□□ -1.51
RTF1-205ENST00000558298 C1orf158Q8N1D5 194 aa5.62□□□□□ -1.51
RTF1-205ENST00000558298 DSCR8Q96T75 97 aa5.62□□□□□ -1.51
RTF1-205ENST00000558298 A0A0J9YWU9 116 aa5.61□□□□□ -1.51
RTF1-205ENST00000558298 IBA57-AS1B1ANH7 110 aa5.61□□□□□ -1.51
RTF1-205ENST00000558298 IGHV3-53P01767 116 aa5.61□□□□□ -1.51
RTF1-205ENST00000558298 XCL1P47992 114 aa5.61□□□□□ -1.51
RTF1-205ENST00000558298 DEFB1P60022 68 aa5.61□□□□□ -1.51
RTF1-205ENST00000558298 C4orf26Q17RF5 130 aa5.61□□□□□ -1.51
RTF1-205ENST00000558298 LINC01561Q8N1V8 128 aa5.61□□□□□ -1.51
RTF1-205ENST00000558298 LINC00167Q96N53 147 aa5.61□□□□□ -1.51
RTF1-205ENST00000558298 OPRPNQ99935 248 aaPredicted RBP5.61□□□□□ -1.51
RTF1-205ENST00000558298 CHCHD7Q9BUK0 85 aa5.61□□□□□ -1.51
RTF1-205ENST00000558298 XCL2Q9UBD3 114 aa5.61□□□□□ -1.51
RTF1-205ENST00000558298 CDKN2A-AS1Q9UH64 79 aa5.61□□□□□ -1.51
RTF1-205ENST00000558298 V9GYY9 64 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms