RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 IGKV2-29A2NJV5 120 aaPredicted RBP3.1□□□□□ -1.91
SPG11-208ENST00000558155 APCSP02743 223 aa3.1□□□□□ -1.91
SPG11-208ENST00000558155 IGLC6P0CF74 106 aa3.1□□□□□ -1.91
SPG11-208ENST00000558155 BCL2P10415 239 aa3.1□□□□□ -1.91
SPG11-208ENST00000558155 FABP4P15090 132 aa3.1□□□□□ -1.91
SPG11-208ENST00000558155 RPL18AQ02543 176 aaKnown RBP3.1□□□□□ -1.91
SPG11-208ENST00000558155 BATFQ16520 125 aa3.1□□□□□ -1.91
SPG11-208ENST00000558155 TAL2Q16559 108 aa3.1□□□□□ -1.91
SPG11-208ENST00000558155 RPL7L1Q6DKI1 246 aaKnown RBP3.1□□□□□ -1.91
SPG11-208ENST00000558155 HIST3H2BBQ8N257 126 aa3.1□□□□□ -1.91
SPG11-208ENST00000558155 C2orf48Q96LS8 159 aa3.1□□□□□ -1.91
SPG11-208ENST00000558155 NAT8BQ9UHF3 227 aa3.1□□□□□ -1.91
SPG11-208ENST00000558155 LAMTOR2Q9Y2Q5 125 aa3.1□□□□□ -1.91
SPG11-208ENST00000558155 MUC2Q02817 5179 aa3.09□□□□□ -1.91
SPG11-208ENST00000558155 B5MCH6 92 aa3.09□□□□□ -1.91
SPG11-208ENST00000558155 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.09□□□□□ -1.91
SPG11-208ENST00000558155 I3L3M4 83 aa3.09□□□□□ -1.91
SPG11-208ENST00000558155 K7EN84 100 aa3.09□□□□□ -1.91
SPG11-208ENST00000558155 KRTAP1-4P0C5Y4 121 aa3.09□□□□□ -1.91
SPG11-208ENST00000558155 MEF2BQ02080 365 aaPredicted RBP3.09□□□□□ -1.91
SPG11-208ENST00000558155 HSD52Q0P140 79 aa3.09□□□□□ -1.91
SPG11-208ENST00000558155 TWIST1Q15672 202 aa3.09□□□□□ -1.91
SPG11-208ENST00000558155 ALKAL2Q6UX46 152 aa3.09□□□□□ -1.91
SPG11-208ENST00000558155 GATD1Q8NB37 220 aa3.09□□□□□ -1.91
SPG11-208ENST00000558155 TMEM18Q96B42 140 aa3.09□□□□□ -1.91
SPG11-208ENST00000558155 IMMP2LQ96T52 175 aa3.09□□□□□ -1.91
SPG11-208ENST00000558155 OPRPNQ99935 248 aaPredicted RBP3.09□□□□□ -1.91
SPG11-208ENST00000558155 SPANXDQ9BXN6 97 aa3.09□□□□□ -1.91
SPG11-208ENST00000558155 CRCT1Q9UGL9 99 aa3.09□□□□□ -1.91
SPG11-208ENST00000558155 CYSLTR1Q9Y271 337 aa3.09□□□□□ -1.91
SPG11-208ENST00000558155 A0A1B0GX51 115 aa3.08□□□□□ -1.92
SPG11-208ENST00000558155 C19orf71A6NCJ1 209 aa3.08□□□□□ -1.92
SPG11-208ENST00000558155 HMSDA8MTL9 139 aa3.08□□□□□ -1.92
SPG11-208ENST00000558155 COX7A2LO14548 114 aa3.08□□□□□ -1.92
SPG11-208ENST00000558155 BCL2L11O43521 198 aa3.08□□□□□ -1.92
SPG11-208ENST00000558155 RPS28P62857 69 aaKnown RBP3.08□□□□□ -1.92
SPG11-208ENST00000558155 UBE2BP63146 152 aa3.08□□□□□ -1.92
SPG11-208ENST00000558155 LYZL1Q6UWQ5 148 aa3.08□□□□□ -1.92
SPG11-208ENST00000558155 CDIP1Q9H305 208 aa3.08□□□□□ -1.92
SPG11-208ENST00000558155 PPDPFQ9H3Y8 114 aa3.08□□□□□ -1.92
SPG11-208ENST00000558155 CDC42SE2Q9NRR3 84 aa3.08□□□□□ -1.92
SPG11-208ENST00000558155 UQCR10Q9UDW1 63 aa3.08□□□□□ -1.92
SPG11-208ENST00000558155 A0A1B0GV50 99 aa3.07□□□□□ -1.92
SPG11-208ENST00000558155 A6NDN8 102 aa3.07□□□□□ -1.92
SPG11-208ENST00000558155 SDHAF1A6NFY7 115 aa3.07□□□□□ -1.92
SPG11-208ENST00000558155 LINC01547P58512 204 aaPredicted RBP3.07□□□□□ -1.92
SPG11-208ENST00000558155 FAM19A5Q7Z5A7 132 aaPredicted RBP3.07□□□□□ -1.92
SPG11-208ENST00000558155 KCNRGQ8N5I3 272 aa3.07□□□□□ -1.92
SPG11-208ENST00000558155 HIST1H2BLQ99880 126 aa3.07□□□□□ -1.92
SPG11-208ENST00000558155 VAMP8Q9BV40 100 aa3.07□□□□□ -1.92
SPG11-208ENST00000558155 RPS10P5Q9NQ39 176 aa3.07□□□□□ -1.92
SPG11-208ENST00000558155 IFITM10A6NMD0 228 aa3.06□□□□□ -1.92
SPG11-208ENST00000558155 ZNF861PO60384 105 aa3.06□□□□□ -1.92
SPG11-208ENST00000558155 TLX1NBP0CAT3 122 aa3.06□□□□□ -1.92
SPG11-208ENST00000558155 C1orf195Q5TG92 126 aa3.06□□□□□ -1.92
SPG11-208ENST00000558155 C5orf38Q86SI9 138 aa3.06□□□□□ -1.92
SPG11-208ENST00000558155 KRTAP11-1Q8IUC1 163 aa3.06□□□□□ -1.92
SPG11-208ENST00000558155 TYMSOSQ8TAI1 123 aa3.06□□□□□ -1.92
SPG11-208ENST00000558155 BORCS7Q96B45 105 aa3.06□□□□□ -1.92
SPG11-208ENST00000558155 RPL39LQ96EH5 51 aaKnown RBP3.06□□□□□ -1.92
SPG11-208ENST00000558155 MRPL35Q9NZE8 188 aaKnown RBP3.06□□□□□ -1.92
SPG11-208ENST00000558155 FXYD6-FXYD2A0A087WZ82 144 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 TRAV13-1A0A0B4J241 112 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 TRBV6-5A0A0K0K1A5 114 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 KANTRA0A1W2PQU2 76 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 FAM168BA1KXE4 195 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 UMAD1C9J7I0 102 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 NDUFA1O15239 70 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 CRYGAP11844 174 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 CCL20P78556 96 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 SPAG11BQ08648 103 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 GAGE2EQ4V326 116 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 CENPWQ5EE01 88 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 MRPL54Q6P161 138 aaKnown RBP3.05□□□□□ -1.92
SPG11-208ENST00000558155 CNFNQ9BYD5 112 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 RPP21Q9H633 154 aaKnown RBP3.05□□□□□ -1.92
SPG11-208ENST00000558155 ST20Q9HBF5 79 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 CYTL1Q9NRR1 136 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 GAGE2DQ9UEU5 116 aa3.05□□□□□ -1.92
SPG11-208ENST00000558155 IGLV7-46A0A075B6I9 117 aa3.04□□□□□ -1.92
SPG11-208ENST00000558155 C7orf77A4D0Y5 90 aa3.04□□□□□ -1.92
SPG11-208ENST00000558155 TSHBP01222 138 aa3.04□□□□□ -1.92
SPG11-208ENST00000558155 CTRLP40313 264 aa3.04□□□□□ -1.92
SPG11-208ENST00000558155 CD164Q04900 197 aa3.04□□□□□ -1.92
SPG11-208ENST00000558155 TPRXLQ17RH7 258 aa3.04□□□□□ -1.92
SPG11-208ENST00000558155 COA6Q5JTJ3 125 aaKnown RBP3.04□□□□□ -1.92
SPG11-208ENST00000558155 FAM213BQ8TBF2 198 aa3.04□□□□□ -1.92
SPG11-208ENST00000558155 C11orf52Q96A22 123 aa3.04□□□□□ -1.92
SPG11-208ENST00000558155 TMEM242Q9NWH2 141 aa3.04□□□□□ -1.92
SPG11-208ENST00000558155 FAT4Q6V0I7 4981 aa3.04□□□□□ -1.92
SPG11-208ENST00000558155 C9JAW5 83 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 VCYO14598 125 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 NUPR1O60356 82 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 HIST1H2BKO60814 126 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 ATP5LO75964 103 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 NDUFC2O95298 119 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 HIST1H2BJP06899 126 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 SPINK8P0C7L1 97 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 HIST1H2BOP23527 126 aa3.03□□□□□ -1.92
SPG11-208ENST00000558155 FCER1GP30273 86 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms