RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 FAM104BQ5XKR9 115 aa3.21□□□□□ -1.9
RTF1-204ENST00000558117 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.21□□□□□ -1.9
RTF1-204ENST00000558117 GOLT1AQ6ZVE7 132 aa3.21□□□□□ -1.9
RTF1-204ENST00000558117 SMIM7Q9BQ49 75 aa3.21□□□□□ -1.9
RTF1-204ENST00000558117 TMEM14CQ9P0S9 112 aa3.21□□□□□ -1.9
RTF1-204ENST00000558117 EPDR1Q9UM22 224 aa3.21□□□□□ -1.9
RTF1-204ENST00000558117 IGKV2-40A0A087WW87 121 aaPredicted RBP3.2□□□□□ -1.9
RTF1-204ENST00000558117 A0A096LNJ9 63 aa3.2□□□□□ -1.9
RTF1-204ENST00000558117 A0A1W2PRE2 83 aa3.2□□□□□ -1.9
RTF1-204ENST00000558117 F6UZH7 168 aa3.2□□□□□ -1.9
RTF1-204ENST00000558117 IGKV2D-40P01614 121 aaPredicted RBP3.2□□□□□ -1.9
RTF1-204ENST00000558117 MGST1P10620 155 aaKnown RBP3.2□□□□□ -1.9
RTF1-204ENST00000558117 CRYGAP11844 174 aa3.2□□□□□ -1.9
RTF1-204ENST00000558117 RPL7P18124 248 aaKnown RBP3.2□□□□□ -1.9
RTF1-204ENST00000558117 RPL35P42766 123 aaKnown RBP3.2□□□□□ -1.9
RTF1-204ENST00000558117 PSG9Q00887 426 aa3.2□□□□□ -1.9
RTF1-204ENST00000558117 ADIRFQ15847 76 aa3.2□□□□□ -1.9
RTF1-204ENST00000558117 CMTM2Q8TAZ6 248 aa3.2□□□□□ -1.9
RTF1-204ENST00000558117 IGF2BP2-AS1Q96M15 143 aa3.2□□□□□ -1.9
RTF1-204ENST00000558117 GPR82Q96P67 336 aa3.2□□□□□ -1.9
RTF1-204ENST00000558117 SEC11CQ9BY50 192 aa3.2□□□□□ -1.9
RTF1-204ENST00000558117 NOP10Q9NPE3 64 aaKnown RBP3.2□□□□□ -1.9
RTF1-204ENST00000558117 OTORQ9NRC9 128 aa3.2□□□□□ -1.9
RTF1-204ENST00000558117 SS18L2Q9UHA2 77 aa3.2□□□□□ -1.9
RTF1-204ENST00000558117 PSORS1C2Q9UIG4 136 aa3.2□□□□□ -1.9
RTF1-204ENST00000558117 TIMM8BQ9Y5J9 83 aaPredicted RBP3.2□□□□□ -1.9
RTF1-204ENST00000558117 TRBV20OR9-2A0A075B6H5 130 aa3.19□□□□□ -1.9
RTF1-204ENST00000558117 C7orf77A4D0Y5 90 aa3.19□□□□□ -1.9
RTF1-204ENST00000558117 ZNF324O75467 553 aaPredicted RBP3.19□□□□□ -1.9
RTF1-204ENST00000558117 TCRAP04437 139 aa3.19□□□□□ -1.9
RTF1-204ENST00000558117 RPS20P60866 119 aaKnown RBP3.19□□□□□ -1.9
RTF1-204ENST00000558117 FABP9Q0Z7S8 132 aa3.19□□□□□ -1.9
RTF1-204ENST00000558117 C10orf91Q5T1B1 145 aa3.19□□□□□ -1.9
RTF1-204ENST00000558117 BAGE2Q86Y30 109 aa3.19□□□□□ -1.9
RTF1-204ENST00000558117 Q8TAT8 98 aa3.19□□□□□ -1.9
RTF1-204ENST00000558117 TVP23CQ96ET8 276 aa3.19□□□□□ -1.9
RTF1-204ENST00000558117 NKX6-2Q9C056 277 aaPredicted RBP3.19□□□□□ -1.9
RTF1-204ENST00000558117 ICOSQ9Y6W8 199 aa3.19□□□□□ -1.9
RTF1-204ENST00000558117 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
RTF1-204ENST00000558117 IGLV4-69A0A075B6H9 119 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 TMSB15BA0A087X1C1 80 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 TSTD3H0UI37 97 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 S100A7P31151 101 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 CSN1S1P47710 185 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 GNG4P50150 75 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 UBE2G1P62253 170 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 SNRPD3P62318 126 aaKnown RBP3.18□□□□□ -1.9
RTF1-204ENST00000558117 CIRBPQ14011 172 aaKnown RBP3.18□□□□□ -1.9
RTF1-204ENST00000558117 Q5W150 140 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 Q6ZQT7 251 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 SVBPQ8N300 66 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 FER1L6-AS1Q8NA97 138 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 C5orf17Q8NAS9 161 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 AGPAT4-IT1Q9H0P7 198 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 SMDT1Q9H4I9 107 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 NAT8Q9UHE5 227 aa3.18□□□□□ -1.9
RTF1-204ENST00000558117 FLGP20930 4061 aaPredicted RBP3.18□□□□□ -1.9
RTF1-204ENST00000558117 LST1O00453 97 aa3.17□□□□□ -1.9
RTF1-204ENST00000558117 SPINK4O60575 86 aa3.17□□□□□ -1.9
RTF1-204ENST00000558117 NTF3P20783 257 aa3.17□□□□□ -1.9
RTF1-204ENST00000558117 RNASE4P34096 147 aaKnown RBP3.17□□□□□ -1.9
RTF1-204ENST00000558117 HIST1H1AQ02539 215 aaPredicted RBP3.17□□□□□ -1.9
RTF1-204ENST00000558117 DEFB116Q30KQ4 102 aa3.17□□□□□ -1.9
RTF1-204ENST00000558117 LINC01556Q5JQF7 62 aa3.17□□□□□ -1.9
RTF1-204ENST00000558117 AMTNQ6UX39 209 aa3.17□□□□□ -1.9
RTF1-204ENST00000558117 FOXI2Q6ZQN5 318 aa3.17□□□□□ -1.9
RTF1-204ENST00000558117 AMN1Q8IY45 258 aa3.17□□□□□ -1.9
RTF1-204ENST00000558117 ANKRD29Q8N6D5 301 aa3.17□□□□□ -1.9
RTF1-204ENST00000558117 HIST1H2BAQ96A08 127 aa3.17□□□□□ -1.9
RTF1-204ENST00000558117 TXNDC17Q9BRA2 123 aa3.17□□□□□ -1.9
RTF1-204ENST00000558117 ARL2-SNX15V9GYD0 113 aa3.17□□□□□ -1.9
RTF1-204ENST00000558117 MUC21A0A0G2JKD1 596 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 MUC21A0A140T8X8 626 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 GRIFINA4D1Z8 144 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 A8MTW9 85 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 A8MUN3 132 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 H7BYZ3 331 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 MT-ND4LP03901 98 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 KRTAP2-3P0C7H8 128 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 GZMBP10144 247 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 SCGB1A1P11684 91 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 CRIP1P50238 77 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 ZNF80P51504 273 aaPredicted RBP3.16□□□□□ -1.9
RTF1-204ENST00000558117 FLI1Q01543 452 aaPredicted RBP3.16□□□□□ -1.9
RTF1-204ENST00000558117 PDE6HQ13956 83 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 TMEM78Q5T7P6 136 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 Q86TA4 180 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 ZC2HC1AQ96GY0 325 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 SLC50A1Q9BRV3 221 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 NDFIP1Q9BT67 221 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 KRTAP2-4Q9BYR9 128 aa3.16□□□□□ -1.9
RTF1-204ENST00000558117 IGLV4-60A0A075B6I1 120 aa3.15□□□□□ -1.91
RTF1-204ENST00000558117 TRAV12-2A0A075B6T6 113 aa3.15□□□□□ -1.91
RTF1-204ENST00000558117 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.15□□□□□ -1.91
RTF1-204ENST00000558117 COX7A2LO14548 114 aa3.15□□□□□ -1.91
RTF1-204ENST00000558117 SH2D1AO60880 128 aa3.15□□□□□ -1.91
RTF1-204ENST00000558117 CXCL1P09341 107 aa3.15□□□□□ -1.91
RTF1-204ENST00000558117 RBX1P62877 108 aa3.15□□□□□ -1.91
RTF1-204ENST00000558117 RHEBQ15382 184 aa3.15□□□□□ -1.91
RTF1-204ENST00000558117 PRR9Q5T870 116 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms