RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 NTN5Q8WTR8 489 aaPredicted RBP11.11□□□□□ -0.63
SNX1-203ENST00000558040 ZNF625Q96I27 306 aaPredicted RBP11.11□□□□□ -0.63
SNX1-203ENST00000558040 SCGB1D4Q6XE38 83 aa11.1□□□□□ -0.63
SNX1-203ENST00000558040 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
SNX1-203ENST00000558040 LINC00526Q96FQ7 95 aa11.09□□□□□ -0.63
SNX1-203ENST00000558040 LRCOL1A6NCL2 159 aa11.08□□□□□ -0.64
SNX1-203ENST00000558040 C2orf82Q6UX34 121 aa11.08□□□□□ -0.64
SNX1-203ENST00000558040 MIEN1Q9BRT3 115 aa11.08□□□□□ -0.64
SNX1-203ENST00000558040 LINC00587B1AMM8 73 aa11.07□□□□□ -0.64
SNX1-203ENST00000558040 WFDC2Q14508 124 aa11.07□□□□□ -0.64
SNX1-203ENST00000558040 DNAH6Q9C0G6 4158 aa11.06□□□□□ -0.64
SNX1-203ENST00000558040 A0A0J9YXY3 114 aa11.06□□□□□ -0.64
SNX1-203ENST00000558040 SYCNQ0VAF6 134 aa11.06□□□□□ -0.64
SNX1-203ENST00000558040 CIRBPQ14011 172 aaKnown RBP11.06□□□□□ -0.64
SNX1-203ENST00000558040 MEIG1Q5JSS6 88 aa11.06□□□□□ -0.64
SNX1-203ENST00000558040 UNQ6190/PRO20217Q6UXQ8 127 aa11.06□□□□□ -0.64
SNX1-203ENST00000558040 A0A087WTM6 91 aa11.05□□□□□ -0.64
SNX1-203ENST00000558040 TRBV30A0A0K0K1B3 111 aa11.05□□□□□ -0.64
SNX1-203ENST00000558040 TP73-AS1Q9UF72 201 aa11.05□□□□□ -0.64
SNX1-203ENST00000558040 EREGO14944 169 aa11.04□□□□□ -0.64
SNX1-203ENST00000558040 HNRNPA3P51991 378 aaKnown RBP11.04□□□□□ -0.64
SNX1-203ENST00000558040 CARD19Q96LW7 228 aa11.04□□□□□ -0.64
SNX1-203ENST00000558040 HIGD1BQ9P298 99 aa11.04□□□□□ -0.64
SNX1-203ENST00000558040 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.03□□□□□ -0.64
SNX1-203ENST00000558040 TMEM238C9JI98 176 aa11.03□□□□□ -0.64
SNX1-203ENST00000558040 TIMM17BO60830 172 aa11.03□□□□□ -0.64
SNX1-203ENST00000558040 C10orf25Q5T742 122 aa11.03□□□□□ -0.64
SNX1-203ENST00000558040 Q6ZRU5 148 aa11.03□□□□□ -0.64
SNX1-203ENST00000558040 Q8N814 137 aa11.03□□□□□ -0.64
SNX1-203ENST00000558040 ERG28Q9UKR5 140 aa11.03□□□□□ -0.64
SNX1-203ENST00000558040 RTL8CO15255 209 aa11.02□□□□□ -0.65
SNX1-203ENST00000558040 CNBPP62633 177 aaKnown RBP11.02□□□□□ -0.65
SNX1-203ENST00000558040 COX17Q14061 63 aa11.02□□□□□ -0.65
SNX1-203ENST00000558040 RNF151Q2KHN1 245 aa11.02□□□□□ -0.65
SNX1-203ENST00000558040 C2orf91Q6ZV80 131 aa11.01□□□□□ -0.65
SNX1-203ENST00000558040 C6orf48Q9UBA6 75 aa11.01□□□□□ -0.65
SNX1-203ENST00000558040 IGLV2-33A0A075B6J2 118 aaPredicted RBP11□□□□□ -0.65
SNX1-203ENST00000558040 SMIM13P0DJ93 91 aa11□□□□□ -0.65
SNX1-203ENST00000558040 LINC00158P58513 81 aa11□□□□□ -0.65
SNX1-203ENST00000558040 KMT2AQ03164 3969 aa10.99□□□□□ -0.65
SNX1-203ENST00000558040 SLPIP03973 132 aa10.99□□□□□ -0.65
SNX1-203ENST00000558040 PFN2P35080 140 aa10.99□□□□□ -0.65
SNX1-203ENST00000558040 TNP2Q05952 138 aa10.99□□□□□ -0.65
SNX1-203ENST00000558040 SPANXB1Q9NS25 103 aaPredicted RBP10.99□□□□□ -0.65
SNX1-203ENST00000558040 DDTP30046 118 aa10.98□□□□□ -0.65
SNX1-203ENST00000558040 SRSF9Q13242 221 aaKnown RBP eCLIP10.98□□□□□ -0.65
SNX1-203ENST00000558040 C9orf116Q5BN46 136 aaPredicted RBP10.98□□□□□ -0.65
SNX1-203ENST00000558040 Q6ZVH6 145 aa10.98□□□□□ -0.65
SNX1-203ENST00000558040 LITAFQ99732 161 aa10.98□□□□□ -0.65
SNX1-203ENST00000558040 A0A0U1RRA0 63 aa10.97□□□□□ -0.65
SNX1-203ENST00000558040 GCSHP23434 173 aa10.97□□□□□ -0.65
SNX1-203ENST00000558040 HIST1H4GQ99525 98 aa10.97□□□□□ -0.65
SNX1-203ENST00000558040 SPANXDQ9BXN6 97 aa10.97□□□□□ -0.65
SNX1-203ENST00000558040 SPANXCQ9NY87 97 aa10.97□□□□□ -0.65
SNX1-203ENST00000558040 PKIGQ9Y2B9 76 aa10.97□□□□□ -0.65
SNX1-203ENST00000558040 TAL2Q16559 108 aa10.96□□□□□ -0.65
SNX1-203ENST00000558040 LINC00336Q6ZUF6 198 aa10.96□□□□□ -0.65
SNX1-203ENST00000558040 NDUFC2-KCTD14E9PQ53 114 aa10.95□□□□□ -0.66
SNX1-203ENST00000558040 HSD52Q0P140 79 aa10.95□□□□□ -0.66
SNX1-203ENST00000558040 ADAMTSL4-AS1Q5T5F5 129 aa10.95□□□□□ -0.66
SNX1-203ENST00000558040 MIR7-3HGQ8N6C7 128 aa10.95□□□□□ -0.66
SNX1-203ENST00000558040 COPS9Q8WXC6 57 aa10.95□□□□□ -0.66
SNX1-203ENST00000558040 PCP4L1A6NKN8 68 aa10.94□□□□□ -0.66
SNX1-203ENST00000558040 TLX1NBP0CAT3 122 aa10.94□□□□□ -0.66
SNX1-203ENST00000558040 LOC107984640A0A0U1RRK4 108 aa10.93□□□□□ -0.66
SNX1-203ENST00000558040 IFITM1P13164 125 aa10.93□□□□□ -0.66
SNX1-203ENST00000558040 CTAG1AP78358 180 aa10.93□□□□□ -0.66
SNX1-203ENST00000558040 DAND5Q8N907 189 aa10.93□□□□□ -0.66
SNX1-203ENST00000558040 C9orf163Q8N9P6 203 aa10.93□□□□□ -0.66
SNX1-203ENST00000558040 PTTG1IPP53801 180 aa10.91□□□□□ -0.66
SNX1-203ENST00000558040 RPL18AQ02543 176 aaKnown RBP10.91□□□□□ -0.66
SNX1-203ENST00000558040 IGLV5-52A0A0A0MRZ9 124 aa10.9□□□□□ -0.66
SNX1-203ENST00000558040 LINC00308Q8TCZ7 52 aa10.9□□□□□ -0.66
SNX1-203ENST00000558040 PPDPFQ9H3Y8 114 aa10.9□□□□□ -0.66
SNX1-203ENST00000558040 SND1-IT1Q9HBX3 110 aa10.9□□□□□ -0.66
SNX1-203ENST00000558040 M0R143 59 aa10.89□□□□□ -0.67
SNX1-203ENST00000558040 NPC2P61916 151 aa10.89□□□□□ -0.67
SNX1-203ENST00000558040 Q6ZRP5 223 aa10.89□□□□□ -0.67
SNX1-203ENST00000558040 MUSTN1Q8IVN3 82 aa10.89□□□□□ -0.67
SNX1-203ENST00000558040 CEND1Q8N111 149 aa10.89□□□□□ -0.67
SNX1-203ENST00000558040 HYDINQ4G0P3 5121 aa10.89□□□□□ -0.67
SNX1-203ENST00000558040 RPL24P83731 157 aaKnown RBP10.88□□□□□ -0.67
SNX1-203ENST00000558040 GAGE2EQ4V326 116 aa10.88□□□□□ -0.67
SNX1-203ENST00000558040 PGPEP1Q9NXJ5 209 aa10.88□□□□□ -0.67
SNX1-203ENST00000558040 GAGE2DQ9UEU5 116 aa10.88□□□□□ -0.67
SNX1-203ENST00000558040 DNAH10Q8IVF4 4471 aa10.87□□□□□ -0.67
SNX1-203ENST00000558040 SACSQ9NZJ4 4579 aa10.87□□□□□ -0.67
SNX1-203ENST00000558040 TMEM238LA0A1B0GVL6 79 aa10.87□□□□□ -0.67
SNX1-203ENST00000558040 A6NJY4 79 aa10.87□□□□□ -0.67
SNX1-203ENST00000558040 GAGE2BQ13066 116 aa10.87□□□□□ -0.67
SNX1-203ENST00000558040 LOC107984156A0A0G2JMH3 177 aa10.86□□□□□ -0.67
SNX1-203ENST00000558040 SOSTDC1Q6X4U4 206 aa10.86□□□□□ -0.67
SNX1-203ENST00000558040 ARL17AQ8IVW1 177 aa10.86□□□□□ -0.67
SNX1-203ENST00000558040 XAGE1AQ9HD64 81 aa10.86□□□□□ -0.67
SNX1-203ENST00000558040 C16orf90A8MZG2 172 aa10.85□□□□□ -0.67
SNX1-203ENST00000558040 HINT1P49773 126 aaPredicted RBP10.84□□□□□ -0.67
SNX1-203ENST00000558040 BVES-AS1Q5T3Y7 98 aa10.84□□□□□ -0.67
SNX1-203ENST00000558040 SDIM1Q6ZPB5 146 aa10.84□□□□□ -0.67
SNX1-203ENST00000558040 LINC00474Q9P2X8 69 aa10.84□□□□□ -0.67
SNX1-203ENST00000558040 KRTAP10-2P60368 255 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms