RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 SPANXDQ9BXN6 97 aa9.49□□□□□ -0.89
RIPK3-206ENST00000557624 IGKV2D-24A0A075B6R9 120 aa9.48□□□□□ -0.89
RIPK3-206ENST00000557624 MT-ATP8P03928 68 aa9.48□□□□□ -0.89
RIPK3-206ENST00000557624 XGP55808 180 aa9.48□□□□□ -0.89
RIPK3-206ENST00000557624 C1orf134Q5TEV5 83 aa9.48□□□□□ -0.89
RIPK3-206ENST00000557624 C6orf223Q8N319 242 aa9.48□□□□□ -0.89
RIPK3-206ENST00000557624 HIST1H4GQ99525 98 aa9.48□□□□□ -0.89
RIPK3-206ENST00000557624 SS18L2Q9UHA2 77 aa9.48□□□□□ -0.89
RIPK3-206ENST00000557624 LINC00959A0A1B0GUT2 108 aa9.47□□□□□ -0.89
RIPK3-206ENST00000557624 BAALCQ8WXS3 180 aa9.47□□□□□ -0.89
RIPK3-206ENST00000557624 C1orf43Q9BWL3 253 aa9.47□□□□□ -0.89
RIPK3-206ENST00000557624 HYDINQ4G0P3 5121 aa9.47□□□□□ -0.89
RIPK3-206ENST00000557624 IGKV2D-26A0A0A0MRZ7 120 aa9.46□□□□□ -0.89
RIPK3-206ENST00000557624 RMI2Q96E14 147 aa9.46□□□□□ -0.89
RIPK3-206ENST00000557624 AMELXQ99217 191 aa9.46□□□□□ -0.89
RIPK3-206ENST00000557624 DNAH6Q9C0G6 4158 aa9.46□□□□□ -0.9
RIPK3-206ENST00000557624 TRAV8-4A0A0B4J246 113 aa9.45□□□□□ -0.9
RIPK3-206ENST00000557624 PRSS1P07477 247 aa9.45□□□□□ -0.9
RIPK3-206ENST00000557624 SS18Q15532 418 aa9.45□□□□□ -0.9
RIPK3-206ENST00000557624 NFE4Q86UQ8 179 aa9.45□□□□□ -0.9
RIPK3-206ENST00000557624 CHCHD10Q8WYQ3 142 aaPredicted RBP9.45□□□□□ -0.9
RIPK3-206ENST00000557624 TRAV12-1A0A0B4J245 112 aa9.45□□□□□ -0.9
RIPK3-206ENST00000557624 XCL1P47992 114 aa9.45□□□□□ -0.9
RIPK3-206ENST00000557624 PSCAO43653 123 aa9.44□□□□□ -0.9
RIPK3-206ENST00000557624 PMVKQ15126 192 aa9.44□□□□□ -0.9
RIPK3-206ENST00000557624 LINC01600Q96MT4 127 aa9.44□□□□□ -0.9
RIPK3-206ENST00000557624 MYMXA0A1B0GTQ4 84 aa9.43□□□□□ -0.9
RIPK3-206ENST00000557624 PRSS29PA6NIE9 313 aa9.43□□□□□ -0.9
RIPK3-206ENST00000557624 TMEM126AQ9H061 195 aa9.43□□□□□ -0.9
RIPK3-206ENST00000557624 SPANXCQ9NY87 97 aa9.43□□□□□ -0.9
RIPK3-206ENST00000557624 RYR2Q92736 4967 aa9.42□□□□□ -0.9
RIPK3-206ENST00000557624 SMCPP49901 116 aaPredicted RBP9.42□□□□□ -0.9
RIPK3-206ENST00000557624 UBE2D1P51668 147 aa9.42□□□□□ -0.9
RIPK3-206ENST00000557624 GAGE2BQ13066 116 aa9.42□□□□□ -0.9
RIPK3-206ENST00000557624 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
RIPK3-206ENST00000557624 Q6ZRN7 208 aaPredicted RBP9.42□□□□□ -0.9
RIPK3-206ENST00000557624 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
RIPK3-206ENST00000557624 B5MCH6 92 aa9.42□□□□□ -0.9
RIPK3-206ENST00000557624 NDUFV3P56181 108 aaKnown RBP9.42□□□□□ -0.9
RIPK3-206ENST00000557624 HERV-K104P63124 156 aa9.42□□□□□ -0.9
RIPK3-206ENST00000557624 A0A0J9YXV3 536 aa9.41□□□□□ -0.9
RIPK3-206ENST00000557624 SNCGO76070 127 aa9.41□□□□□ -0.9
RIPK3-206ENST00000557624 IFITM1P13164 125 aa9.41□□□□□ -0.9
RIPK3-206ENST00000557624 LINC00242Q5T6M2 205 aa9.41□□□□□ -0.9
RIPK3-206ENST00000557624 KRTAP26-1Q6PEX3 210 aa9.41□□□□□ -0.9
RIPK3-206ENST00000557624 RTL8CO15255 209 aa9.4□□□□□ -0.9
RIPK3-206ENST00000557624 CD164L2Q6UWJ8 174 aa9.4□□□□□ -0.9
RIPK3-206ENST00000557624 MAPKAPK5-AS1Q8N8E1 139 aa9.4□□□□□ -0.9
RIPK3-206ENST00000557624 F8VRH5 84 aa9.38□□□□□ -0.91
RIPK3-206ENST00000557624 LECT2O14960 151 aa9.38□□□□□ -0.91
RIPK3-206ENST00000557624 SCGB1C2P0DMR2 95 aa9.38□□□□□ -0.91
RIPK3-206ENST00000557624 COX6A2Q02221 97 aa9.38□□□□□ -0.91
RIPK3-206ENST00000557624 CARD19Q96LW7 228 aa9.38□□□□□ -0.91
RIPK3-206ENST00000557624 C5orf38Q86SI9 138 aa9.38□□□□□ -0.91
RIPK3-206ENST00000557624 IGLV4-69A0A075B6H9 119 aa9.37□□□□□ -0.91
RIPK3-206ENST00000557624 COX7A2LO14548 114 aa9.37□□□□□ -0.91
RIPK3-206ENST00000557624 PSMB2P49721 201 aa9.37□□□□□ -0.91
RIPK3-206ENST00000557624 HERVK_113P63121 156 aa9.37□□□□□ -0.91
RIPK3-206ENST00000557624 MRPL35Q9NZE8 188 aaKnown RBP9.37□□□□□ -0.91
RIPK3-206ENST00000557624 IGHV3OR16-9A0A0B4J2B5 98 aa9.36□□□□□ -0.91
RIPK3-206ENST00000557624 TINCRA0A1B0GVN0 87 aa9.36□□□□□ -0.91
RIPK3-206ENST00000557624 MALP21145 153 aa9.36□□□□□ -0.91
RIPK3-206ENST00000557624 TNP2Q05952 138 aa9.36□□□□□ -0.91
RIPK3-206ENST00000557624 FAM19A3Q7Z5A8 133 aa9.36□□□□□ -0.91
RIPK3-206ENST00000557624 SMIM20Q8N5G0 67 aa9.35□□□□□ -0.91
RIPK3-206ENST00000557624 TTTY13Q9BZ97 58 aa9.35□□□□□ -0.91
RIPK3-206ENST00000557624 CDKN2A-AS1Q9UH64 79 aa9.35□□□□□ -0.91
RIPK3-206ENST00000557624 DNAH10Q8IVF4 4471 aa9.35□□□□□ -0.91
RIPK3-206ENST00000557624 C11orf86A6NJI1 115 aa9.34□□□□□ -0.91
RIPK3-206ENST00000557624 USP17L23D6RBM5 183 aa9.34□□□□□ -0.91
RIPK3-206ENST00000557624 RPL13AP40429 203 aaKnown RBP9.34□□□□□ -0.91
RIPK3-206ENST00000557624 LRCOL1A6NCL2 159 aa9.34□□□□□ -0.91
RIPK3-206ENST00000557624 ANKRD29Q8N6D5 301 aa9.34□□□□□ -0.91
RIPK3-206ENST00000557624 RYR3Q15413 4870 aa9.33□□□□□ -0.92
RIPK3-206ENST00000557624 A0A087WTM6 91 aa9.33□□□□□ -0.92
RIPK3-206ENST00000557624 A0A087WZ39 114 aa9.33□□□□□ -0.92
RIPK3-206ENST00000557624 LOC107984156A0A0G2JMH3 177 aa9.33□□□□□ -0.92
RIPK3-206ENST00000557624 ARL17AQ8IVW1 177 aa9.33□□□□□ -0.92
RIPK3-206ENST00000557624 DNAH2Q9P225 4427 aa9.33□□□□□ -0.92
RIPK3-206ENST00000557624 IGLV5-45A0A087WSX0 123 aa9.32□□□□□ -0.92
RIPK3-206ENST00000557624 FAM240AA0A1B0GVK7 77 aa9.32□□□□□ -0.92
RIPK3-206ENST00000557624 TMEM170BQ5T4T1 132 aa9.32□□□□□ -0.92
RIPK3-206ENST00000557624 LINC00336Q6ZUF6 198 aa9.32□□□□□ -0.92
RIPK3-206ENST00000557624 C15orf56Q8N910 161 aa9.32□□□□□ -0.92
RIPK3-206ENST00000557624 ZNF22P17026 224 aaPredicted RBP9.31□□□□□ -0.92
RIPK3-206ENST00000557624 HERVK_113P61574 105 aa9.31□□□□□ -0.92
RIPK3-206ENST00000557624 HIGD2BQ4VC39 106 aa9.31□□□□□ -0.92
RIPK3-206ENST00000557624 IGHV1-58A0A0C4DH39 117 aa9.31□□□□□ -0.92
RIPK3-206ENST00000557624 SLC25A20O43772 301 aa9.31□□□□□ -0.92
RIPK3-206ENST00000557624 SRSF9Q13242 221 aaKnown RBP eCLIP9.31□□□□□ -0.92
RIPK3-206ENST00000557624 TCL1BO95988 128 aa9.3□□□□□ -0.92
RIPK3-206ENST00000557624 ZNF815PA8K554 130 aa9.29□□□□□ -0.92
RIPK3-206ENST00000557624 SCGB1D4Q6XE38 83 aa9.29□□□□□ -0.92
RIPK3-206ENST00000557624 LINC00526Q96FQ7 95 aa9.29□□□□□ -0.92
RIPK3-206ENST00000557624 IMUPQ9GZP8 106 aa9.29□□□□□ -0.92
RIPK3-206ENST00000557624 FRAS1Q86XX4 4008 aa9.29□□□□□ -0.92
RIPK3-206ENST00000557624 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.28□□□□□ -0.92
RIPK3-206ENST00000557624 IGHV3-64A0A075B6Q5 118 aa9.28□□□□□ -0.92
RIPK3-206ENST00000557624 SMIM1B2RUZ4 78 aa9.28□□□□□ -0.92
RIPK3-206ENST00000557624 CCDC179H3BU77 68 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms