RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 SCGB1D4Q6XE38 83 aa7.05□□□□□ -1.28
PRKCH-227ENST00000557599 C14orf144Q96I85 54 aa7.05□□□□□ -1.28
PRKCH-227ENST00000557599 PRO1933Q9H354 126 aa7.05□□□□□ -1.28
PRKCH-227ENST00000557599 NDUFA12Q9UI09 145 aa7.05□□□□□ -1.28
PRKCH-227ENST00000557599 ZNF561-AS1K7EIQ3 104 aa7.04□□□□□ -1.28
PRKCH-227ENST00000557599 DLEU1O43261 78 aa7.04□□□□□ -1.28
PRKCH-227ENST00000557599 CKS1BP61024 79 aa7.04□□□□□ -1.28
PRKCH-227ENST00000557599 HERV-K104P63124 156 aa7.04□□□□□ -1.28
PRKCH-227ENST00000557599 SPAG11BQ08648 103 aa7.04□□□□□ -1.28
PRKCH-227ENST00000557599 Q8IZM0 81 aa7.04□□□□□ -1.28
PRKCH-227ENST00000557599 IGKV2D-26A0A0A0MRZ7 120 aa7.03□□□□□ -1.28
PRKCH-227ENST00000557599 LINC00587B1AMM8 73 aa7.03□□□□□ -1.28
PRKCH-227ENST00000557599 HNRNPA3P51991 378 aaKnown RBP7.03□□□□□ -1.28
PRKCH-227ENST00000557599 C14orf177Q52M58 125 aa7.03□□□□□ -1.28
PRKCH-227ENST00000557599 MIEN1Q9BRT3 115 aa7.03□□□□□ -1.28
PRKCH-227ENST00000557599 F8WDY8 70 aa7.02□□□□□ -1.29
PRKCH-227ENST00000557599 M0R2N4 97 aa7.02□□□□□ -1.29
PRKCH-227ENST00000557599 GCSHP23434 173 aa7.02□□□□□ -1.29
PRKCH-227ENST00000557599 CIRBPQ14011 172 aaKnown RBP7.02□□□□□ -1.29
PRKCH-227ENST00000557599 PCP2Q8IVA1 136 aa7.02□□□□□ -1.29
PRKCH-227ENST00000557599 BOD1L2Q8IYS8 172 aa7.02□□□□□ -1.29
PRKCH-227ENST00000557599 NDUFA1O15239 70 aa7.01□□□□□ -1.29
PRKCH-227ENST00000557599 MEIG1Q5JSS6 88 aa7.01□□□□□ -1.29
PRKCH-227ENST00000557599 C6orf223Q8N319 242 aa7.01□□□□□ -1.29
PRKCH-227ENST00000557599 KRTAP4-5Q9BYR2 181 aa7.01□□□□□ -1.29
PRKCH-227ENST00000557599 TMEM238C9JI98 176 aa7□□□□□ -1.29
PRKCH-227ENST00000557599 TSPEAR-AS2P59090 65 aa7□□□□□ -1.29
PRKCH-227ENST00000557599 C1orf134Q5TEV5 83 aa7□□□□□ -1.29
PRKCH-227ENST00000557599 KRTAP26-1Q6PEX3 210 aa7□□□□□ -1.29
PRKCH-227ENST00000557599 COPS9Q8WXC6 57 aa7□□□□□ -1.29
PRKCH-227ENST00000557599 KRTAP1-5Q9BYS1 174 aa7□□□□□ -1.29
PRKCH-227ENST00000557599 PCP4L1A6NKN8 68 aa6.99□□□□□ -1.29
PRKCH-227ENST00000557599 USP17L23D6RBM5 183 aa6.99□□□□□ -1.29
PRKCH-227ENST00000557599 HIGD2BQ4VC39 106 aa6.99□□□□□ -1.29
PRKCH-227ENST00000557599 C2orf48Q96LS8 159 aa6.99□□□□□ -1.29
PRKCH-227ENST00000557599 CAMK2N2Q96S95 79 aa6.99□□□□□ -1.29
PRKCH-227ENST00000557599 GVQW2A0A096LPI5 108 aaPredicted RBP6.98□□□□□ -1.29
PRKCH-227ENST00000557599 EREGO14944 169 aa6.98□□□□□ -1.29
PRKCH-227ENST00000557599 CDK2AP2O75956 126 aa6.98□□□□□ -1.29
PRKCH-227ENST00000557599 DDTP30046 118 aa6.98□□□□□ -1.29
PRKCH-227ENST00000557599 TTTY13Q9BZ97 58 aa6.98□□□□□ -1.29
PRKCH-227ENST00000557599 HIGD1BQ9P298 99 aa6.98□□□□□ -1.29
PRKCH-227ENST00000557599 HERC1Q15751 4861 aa6.98□□□□□ -1.29
PRKCH-227ENST00000557599 TIMM17BO60830 172 aa6.97□□□□□ -1.29
PRKCH-227ENST00000557599 SRSF9Q13242 221 aaKnown RBP eCLIP6.97□□□□□ -1.29
PRKCH-227ENST00000557599 MAPKAPK5-AS1Q8N8E1 139 aa6.97□□□□□ -1.29
PRKCH-227ENST00000557599 C15orf56Q8N910 161 aa6.97□□□□□ -1.29
PRKCH-227ENST00000557599 SVIPQ8NHG7 77 aa6.97□□□□□ -1.29
PRKCH-227ENST00000557599 ZNF625Q96I27 306 aaPredicted RBP6.97□□□□□ -1.29
PRKCH-227ENST00000557599 FAT1Q14517 4588 aa6.97□□□□□ -1.29
PRKCH-227ENST00000557599 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.96□□□□□ -1.3
PRKCH-227ENST00000557599 A0A0J9YXY3 114 aa6.96□□□□□ -1.3
PRKCH-227ENST00000557599 TRBV30A0A0K0K1B3 111 aa6.96□□□□□ -1.3
PRKCH-227ENST00000557599 TNP2Q05952 138 aa6.96□□□□□ -1.3
PRKCH-227ENST00000557599 KIAA0087Q14695 138 aa6.96□□□□□ -1.3
PRKCH-227ENST00000557599 Q6ZVH6 145 aa6.96□□□□□ -1.3
PRKCH-227ENST00000557599 NTN5Q8WTR8 489 aaPredicted RBP6.96□□□□□ -1.3
PRKCH-227ENST00000557599 HIST1H4GQ99525 98 aa6.96□□□□□ -1.3
PRKCH-227ENST00000557599 PKIGQ9Y2B9 76 aa6.96□□□□□ -1.3
PRKCH-227ENST00000557599 M0R143 59 aa6.95□□□□□ -1.3
PRKCH-227ENST00000557599 LINC00158P58513 81 aa6.95□□□□□ -1.3
PRKCH-227ENST00000557599 HSD52Q0P140 79 aa6.95□□□□□ -1.3
PRKCH-227ENST00000557599 SYCNQ0VAF6 134 aa6.95□□□□□ -1.3
PRKCH-227ENST00000557599 TAL2Q16559 108 aa6.95□□□□□ -1.3
PRKCH-227ENST00000557599 ERG28Q9UKR5 140 aa6.95□□□□□ -1.3
PRKCH-227ENST00000557599 LECT2O14960 151 aa6.94□□□□□ -1.3
PRKCH-227ENST00000557599 COX17Q14061 63 aa6.94□□□□□ -1.3
PRKCH-227ENST00000557599 C2orf82Q6UX34 121 aa6.94□□□□□ -1.3
PRKCH-227ENST00000557599 CARD19Q96LW7 228 aa6.94□□□□□ -1.3
PRKCH-227ENST00000557599 SPANXB1Q9NS25 103 aaPredicted RBP6.94□□□□□ -1.3
PRKCH-227ENST00000557599 TMEM238LA0A1B0GVL6 79 aa6.93□□□□□ -1.3
PRKCH-227ENST00000557599 A6NJY4 79 aa6.93□□□□□ -1.3
PRKCH-227ENST00000557599 IFITM1P13164 125 aa6.93□□□□□ -1.3
PRKCH-227ENST00000557599 CTAG1AP78358 180 aa6.93□□□□□ -1.3
PRKCH-227ENST00000557599 UNQ6190/PRO20217Q6UXQ8 127 aa6.93□□□□□ -1.3
PRKCH-227ENST00000557599 LINC00526Q96FQ7 95 aa6.93□□□□□ -1.3
PRKCH-227ENST00000557599 A0A0U1RRA0 63 aa6.92□□□□□ -1.3
PRKCH-227ENST00000557599 SMIM13P0DJ93 91 aa6.92□□□□□ -1.3
PRKCH-227ENST00000557599 PFN2P35080 140 aa6.92□□□□□ -1.3
PRKCH-227ENST00000557599 RNF151Q2KHN1 245 aa6.92□□□□□ -1.3
PRKCH-227ENST00000557599 Q6ZRN7 208 aaPredicted RBP6.92□□□□□ -1.3
PRKCH-227ENST00000557599 C2orf91Q6ZV80 131 aa6.92□□□□□ -1.3
PRKCH-227ENST00000557599 SPANXDQ9BXN6 97 aa6.92□□□□□ -1.3
PRKCH-227ENST00000557599 SPANXCQ9NY87 97 aa6.92□□□□□ -1.3
PRKCH-227ENST00000557599 VPS13BQ7Z7G8 4022 aa6.92□□□□□ -1.3
PRKCH-227ENST00000557599 PTTG1IPP53801 180 aa6.91□□□□□ -1.3
PRKCH-227ENST00000557599 RPL24P83731 157 aaKnown RBP6.91□□□□□ -1.3
PRKCH-227ENST00000557599 Q6ZRU5 148 aa6.91□□□□□ -1.3
PRKCH-227ENST00000557599 TP73-AS1Q9UF72 201 aa6.91□□□□□ -1.3
PRKCH-227ENST00000557599 DNAH8Q96JB1 4490 aa6.91□□□□□ -1.3
PRKCH-227ENST00000557599 MYCBP2O75592 4640 aa6.9□□□□□ -1.3
PRKCH-227ENST00000557599 MIR7-3HGQ8N6C7 128 aa6.9□□□□□ -1.3
PRKCH-227ENST00000557599 C6orf48Q9UBA6 75 aa6.9□□□□□ -1.3
PRKCH-227ENST00000557599 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.89□□□□□ -1.31
PRKCH-227ENST00000557599 A0A087WTM6 91 aa6.89□□□□□ -1.31
PRKCH-227ENST00000557599 C16orf90A8MZG2 172 aa6.89□□□□□ -1.31
PRKCH-227ENST00000557599 C10orf25Q5T742 122 aa6.89□□□□□ -1.31
PRKCH-227ENST00000557599 CEND1Q8N111 149 aa6.89□□□□□ -1.31
PRKCH-227ENST00000557599 LOC107984640A0A0U1RRK4 108 aa6.88□□□□□ -1.31
PRKCH-227ENST00000557599 LRCOL1A6NCL2 159 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms