RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 GAGE12IP0CL82 117 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 EMP1P54849 157 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 NDUFV3P56181 108 aaKnown RBP4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 GAGE4Q13068 117 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 DEFB104AQ8WTQ1 72 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 TMEM263Q8WUH6 116 aaKnown RBP4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 SPANXCQ9NY87 97 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 PHLDA3Q9Y5J5 127 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 KIF25-AS1Q9Y6Z4 181 aa4.71□□□□□ -1.66
SPTLC2-206ENST00000557566 PKHD1L1Q86WI1 4243 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 IGHV3-49A0A0A0MS15 119 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 TRAV2A0A0B4J234 112 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 TRBV10-2A0A0K0K1G8 114 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 TSHBP01222 138 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 IFITM1P13164 125 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 LGALS3P17931 250 aaKnown RBP4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 S100A4P26447 101 aaKnown RBP4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 FUSP35637 526 aaKnown RBP eCLIP4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 LINC00315P59091 139 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 KRTAP10-1P60331 282 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 LINC01620Q4KN68 170 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 FAM222AQ5U5X8 452 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 RNF182Q8N6D2 247 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 OR10J6PQ8NGY7 276 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 ODF3Q96PU9 254 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 KIR2DL4Q99706 377 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 IMUPQ9GZP8 106 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 Q9H8V8 135 aa4.7□□□□□ -1.66
SPTLC2-206ENST00000557566 TRAV8-4A0A0B4J246 113 aa4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 TMEM223A0PJW6 202 aa4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 SMIM9A6NGZ8 99 aa4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 KNCNA6PVL3 124 aa4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 M0R2P5 195 aa4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 SOCS3O14543 225 aa4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 DUSP14O95147 198 aaKnown RBP4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 ACYP1P07311 99 aa4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 RNASE4P34096 147 aaKnown RBP4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 C14orf178Q8N769 122 aaPredicted RBP4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 PTH2Q96A98 100 aa4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 RPL39LQ96EH5 51 aaKnown RBP4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 KRTAP1-5Q9BYS1 174 aa4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 TMEM126AQ9H061 195 aa4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 LINC00588Q9Y4M8 146 aa4.69□□□□□ -1.66
SPTLC2-206ENST00000557566 IGHV3OR16-13A0A075B7E8 117 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 IGHV3-74A0A0B4J1X5 117 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 A0A0J9YXY3 114 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 TRBV7-7A0A0K0K1E9 115 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 A4D1N5 150 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 C9JAW5 83 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 H3BMM0 161 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 TIMM17BO60830 172 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 OXTP01178 125 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 RNASE3P12724 160 aaKnown RBP4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 DAD1P61803 113 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 HAMPP81172 84 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 ANXA2RQ3ZCQ2 193 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 TMEM170BQ5T4T1 132 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 PRR9Q5T870 116 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 CFAP161Q6P656 301 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 UBE2WQ96B02 151 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 XCL2Q9UBD3 114 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 PYGO1Q9Y3Y4 419 aa4.68□□□□□ -1.66
SPTLC2-206ENST00000557566 KLLNB2CW77 178 aa4.67□□□□□ -1.66
SPTLC2-206ENST00000557566 J3KRW8 73 aa4.67□□□□□ -1.66
SPTLC2-206ENST00000557566 ATP5G1P05496 136 aa4.67□□□□□ -1.66
SPTLC2-206ENST00000557566 MGPP08493 103 aa4.67□□□□□ -1.66
SPTLC2-206ENST00000557566 COX6CP09669 75 aa4.67□□□□□ -1.66
SPTLC2-206ENST00000557566 PRB4P10163 310 aaPredicted RBP4.67□□□□□ -1.66
SPTLC2-206ENST00000557566 TSPEAR-AS2P59090 65 aa4.67□□□□□ -1.66
SPTLC2-206ENST00000557566 PPDPFQ9H3Y8 114 aa4.67□□□□□ -1.66
SPTLC2-206ENST00000557566 DNAH8Q96JB1 4490 aa4.66□□□□□ -1.66
SPTLC2-206ENST00000557566 NTN5Q8WTR8 489 aaPredicted RBP4.66□□□□□ -1.66
SPTLC2-206ENST00000557566 C9orf85Q96MD7 179 aa4.66□□□□□ -1.66
SPTLC2-206ENST00000557566 IGHV3OR16-12A0A075B7B8 117 aa4.65□□□□□ -1.67
SPTLC2-206ENST00000557566 TRAV4A0A0B4J268 109 aa4.65□□□□□ -1.67
SPTLC2-206ENST00000557566 K7EQG2 157 aa4.65□□□□□ -1.67
SPTLC2-206ENST00000557566 LST1O00453 97 aa4.65□□□□□ -1.67
SPTLC2-206ENST00000557566 ZNF22P17026 224 aaPredicted RBP4.65□□□□□ -1.67
SPTLC2-206ENST00000557566 ID1P41134 155 aa4.65□□□□□ -1.67
SPTLC2-206ENST00000557566 PIK3CD-AS1Q5SR53 167 aa4.65□□□□□ -1.67
SPTLC2-206ENST00000557566 FAM159AQ6UWV7 190 aa4.65□□□□□ -1.67
SPTLC2-206ENST00000557566 Q6ZRN7 208 aaPredicted RBP4.65□□□□□ -1.67
SPTLC2-206ENST00000557566 MUSTN1Q8IVN3 82 aa4.65□□□□□ -1.67
SPTLC2-206ENST00000557566 C20orf203Q8NBC4 194 aa4.65□□□□□ -1.67
SPTLC2-206ENST00000557566 SS18L2Q9UHA2 77 aa4.65□□□□□ -1.67
SPTLC2-206ENST00000557566 IGHV3-66A0A0C4DH42 116 aa4.64□□□□□ -1.67
SPTLC2-206ENST00000557566 I3L3M4 83 aa4.64□□□□□ -1.67
SPTLC2-206ENST00000557566 M0QY20 66 aa4.64□□□□□ -1.67
SPTLC2-206ENST00000557566 MRPS36P82909 103 aaKnown RBP4.64□□□□□ -1.67
SPTLC2-206ENST00000557566 MIAQ16674 131 aa4.64□□□□□ -1.67
SPTLC2-206ENST00000557566 C2orf82Q6UX34 121 aa4.64□□□□□ -1.67
SPTLC2-206ENST00000557566 COPS9Q8WXC6 57 aa4.64□□□□□ -1.67
SPTLC2-206ENST00000557566 TMEM101Q96IK0 257 aa4.64□□□□□ -1.67
SPTLC2-206ENST00000557566 LITAFQ99732 161 aa4.64□□□□□ -1.67
SPTLC2-206ENST00000557566 UPK3BQ9BT76 320 aa4.64□□□□□ -1.67
SPTLC2-206ENST00000557566 ICOSQ9Y6W8 199 aa4.64□□□□□ -1.67
SPTLC2-206ENST00000557566 IGLV4-3A0A075B6K6 122 aa4.63□□□□□ -1.67
SPTLC2-206ENST00000557566 IGHV1-58A0A0C4DH39 117 aa4.63□□□□□ -1.67
SPTLC2-206ENST00000557566 TINCRA0A1B0GVN0 87 aa4.63□□□□□ -1.67
SPTLC2-206ENST00000557566 F5H768 121 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms