RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 LINC01561Q8N1V8 128 aa6.48□□□□□ -1.37
SNX6-208ENST00000556712 LINC00469Q8N7U9 141 aa6.48□□□□□ -1.37
SNX6-208ENST00000556712 GEMIN7Q9H840 131 aaKnown RBP6.48□□□□□ -1.37
SNX6-208ENST00000556712 HERC1Q15751 4861 aa6.47□□□□□ -1.37
SNX6-208ENST00000556712 FAM168BA1KXE4 195 aa6.47□□□□□ -1.37
SNX6-208ENST00000556712 F8WDY8 70 aa6.47□□□□□ -1.37
SNX6-208ENST00000556712 GAGE2EQ4V326 116 aa6.47□□□□□ -1.37
SNX6-208ENST00000556712 C9orf116Q5BN46 136 aaPredicted RBP6.47□□□□□ -1.37
SNX6-208ENST00000556712 PACRGQ96M98 296 aaPredicted RBP6.47□□□□□ -1.37
SNX6-208ENST00000556712 GAGE2DQ9UEU5 116 aa6.47□□□□□ -1.37
SNX6-208ENST00000556712 SMIM1B2RUZ4 78 aa6.46□□□□□ -1.38
SNX6-208ENST00000556712 PRSS2P07478 247 aa6.46□□□□□ -1.38
SNX6-208ENST00000556712 SEC11AP67812 179 aa6.46□□□□□ -1.38
SNX6-208ENST00000556712 PHF5AQ7RTV0 110 aaKnown RBP6.46□□□□□ -1.38
SNX6-208ENST00000556712 Q8IZM0 81 aa6.46□□□□□ -1.38
SNX6-208ENST00000556712 CST9LQ9H4G1 147 aa6.46□□□□□ -1.38
SNX6-208ENST00000556712 IGLV5-45A0A087WSX0 123 aa6.45□□□□□ -1.38
SNX6-208ENST00000556712 TRBV30A0A0K0K1B3 111 aa6.45□□□□□ -1.38
SNX6-208ENST00000556712 TINCRA0A1B0GVN0 87 aa6.45□□□□□ -1.38
SNX6-208ENST00000556712 LINC01549A6NIU2 74 aa6.45□□□□□ -1.38
SNX6-208ENST00000556712 HBDP02042 147 aa6.45□□□□□ -1.38
SNX6-208ENST00000556712 SPINK8P0C7L1 97 aa6.45□□□□□ -1.38
SNX6-208ENST00000556712 LINC00614P0C842 121 aa6.45□□□□□ -1.38
SNX6-208ENST00000556712 TLX1NBP0CAT3 122 aa6.45□□□□□ -1.38
SNX6-208ENST00000556712 PMVKQ15126 192 aa6.45□□□□□ -1.38
SNX6-208ENST00000556712 FAM19A5Q7Z5A7 132 aaPredicted RBP6.45□□□□□ -1.38
SNX6-208ENST00000556712 NDUFA6P56556 154 aa6.44□□□□□ -1.38
SNX6-208ENST00000556712 CKS1BP61024 79 aa6.44□□□□□ -1.38
SNX6-208ENST00000556712 PDZD11Q5EBL8 140 aa6.44□□□□□ -1.38
SNX6-208ENST00000556712 C6orf226Q5I0X4 101 aa6.44□□□□□ -1.38
SNX6-208ENST00000556712 C9orf129Q5T035 196 aaKnown RBP6.43□□□□□ -1.38
SNX6-208ENST00000556712 KRTAP7-1Q8IUC3 87 aa6.43□□□□□ -1.38
SNX6-208ENST00000556712 NDUFC2-KCTD14E9PQ53 114 aa6.42□□□□□ -1.38
SNX6-208ENST00000556712 OXTP01178 125 aa6.42□□□□□ -1.38
SNX6-208ENST00000556712 IGLC3P0DOY3 106 aa6.42□□□□□ -1.38
SNX6-208ENST00000556712 RAB5BP61020 215 aa6.42□□□□□ -1.38
SNX6-208ENST00000556712 KRTAP11-1Q8IUC1 163 aa6.42□□□□□ -1.38
SNX6-208ENST00000556712 COX7B2Q8TF08 81 aa6.42□□□□□ -1.38
SNX6-208ENST00000556712 F8VRH5 84 aa6.41□□□□□ -1.38
SNX6-208ENST00000556712 ZNF22P17026 224 aaPredicted RBP6.41□□□□□ -1.38
SNX6-208ENST00000556712 PSORS1C2Q9UIG4 136 aa6.41□□□□□ -1.38
SNX6-208ENST00000556712 M0QXV9 152 aa6.4□□□□□ -1.38
SNX6-208ENST00000556712 ATP5LO75964 103 aa6.4□□□□□ -1.38
SNX6-208ENST00000556712 TRGC2P03986 189 aa6.4□□□□□ -1.38
SNX6-208ENST00000556712 CXCL5P42830 114 aa6.4□□□□□ -1.38
SNX6-208ENST00000556712 XAGE1AQ9HD64 81 aa6.4□□□□□ -1.38
SNX6-208ENST00000556712 C11orf86A6NJI1 115 aa6.39□□□□□ -1.39
SNX6-208ENST00000556712 H3BRM9 83 aa6.39□□□□□ -1.39
SNX6-208ENST00000556712 MT1HL1P0DM35 61 aa6.39□□□□□ -1.39
SNX6-208ENST00000556712 C1orf137Q5JT78 98 aa6.39□□□□□ -1.39
SNX6-208ENST00000556712 SERTAD4-AS1Q5TG53 156 aa6.39□□□□□ -1.39
SNX6-208ENST00000556712 FAM19A2Q8N3H0 131 aa6.39□□□□□ -1.39
SNX6-208ENST00000556712 CHCHD1Q96BP2 118 aaKnown RBP6.39□□□□□ -1.39
SNX6-208ENST00000556712 LINC00310P59036 64 aa6.38□□□□□ -1.39
SNX6-208ENST00000556712 BAGE3Q86Y29 109 aa6.38□□□□□ -1.39
SNX6-208ENST00000556712 TNXBP22105 4242 aa6.37□□□□□ -1.39
SNX6-208ENST00000556712 IGLV5-39A0A0G2JS06 123 aa6.37□□□□□ -1.39
SNX6-208ENST00000556712 COLCA2A8K830 154 aa6.37□□□□□ -1.39
SNX6-208ENST00000556712 SCO1O75880 301 aa6.37□□□□□ -1.39
SNX6-208ENST00000556712 UBE2BP63146 152 aa6.37□□□□□ -1.39
SNX6-208ENST00000556712 TMEM170BQ5T4T1 132 aa6.37□□□□□ -1.39
SNX6-208ENST00000556712 IFI27L1Q96BM0 104 aa6.37□□□□□ -1.39
SNX6-208ENST00000556712 CHTOPQ9Y3Y2 248 aaKnown RBP6.37□□□□□ -1.39
SNX6-208ENST00000556712 HSBP1O75506 76 aa6.36□□□□□ -1.39
SNX6-208ENST00000556712 SERF1AO75920 110 aa6.36□□□□□ -1.39
SNX6-208ENST00000556712 SRSF9Q13242 221 aaKnown RBP eCLIP6.36□□□□□ -1.391e-7■■■■□ 24.7
SNX6-208ENST00000556712 SPINK6Q6UWN8 80 aa6.36□□□□□ -1.39
SNX6-208ENST00000556712 H0Y8G0 127 aa6.35□□□□□ -1.39
SNX6-208ENST00000556712 NUPR1O60356 82 aa6.35□□□□□ -1.39
SNX6-208ENST00000556712 TRAV12-1A0A0B4J245 112 aa6.34□□□□□ -1.39
SNX6-208ENST00000556712 IGLV7-43P04211 117 aa6.34□□□□□ -1.39
SNX6-208ENST00000556712 PFN2P35080 140 aa6.34□□□□□ -1.39
SNX6-208ENST00000556712 ODF1Q14990 250 aa6.34□□□□□ -1.39
SNX6-208ENST00000556712 ZNF625Q96I27 306 aaPredicted RBP6.34□□□□□ -1.39
SNX6-208ENST00000556712 C22orf24Q9Y442 160 aa6.34□□□□□ -1.39
SNX6-208ENST00000556712 LINC01600Q96MT4 127 aa6.33□□□□□ -1.4
SNX6-208ENST00000556712 ERG28Q9UKR5 140 aa6.33□□□□□ -1.4
SNX6-208ENST00000556712 TMEM223A0PJW6 202 aa6.32□□□□□ -1.4
SNX6-208ENST00000556712 LEPROTL1O95214 131 aa6.32□□□□□ -1.4
SNX6-208ENST00000556712 REG3GQ6UW15 175 aa6.32□□□□□ -1.4
SNX6-208ENST00000556712 GAGE10A6NGK3 116 aa6.31□□□□□ -1.4
SNX6-208ENST00000556712 FABP4P15090 132 aa6.31□□□□□ -1.4
SNX6-208ENST00000556712 MRPL55Q7Z7F7 128 aaKnown RBP6.31□□□□□ -1.4
SNX6-208ENST00000556712 A0A0U1RRA0 63 aa6.29□□□□□ -1.4
SNX6-208ENST00000556712 RPL37AP8A6NKH3 93 aa6.29□□□□□ -1.4
SNX6-208ENST00000556712 H0Y9J4 135 aa6.29□□□□□ -1.4
SNX6-208ENST00000556712 LBHQ53QV2 105 aaPredicted RBP6.29□□□□□ -1.4
SNX6-208ENST00000556712 Q8NDZ9 215 aa6.29□□□□□ -1.4
SNX6-208ENST00000556712 LINC00167Q96N53 147 aa6.29□□□□□ -1.4
SNX6-208ENST00000556712 PMCHL2Q9BQD1 86 aa6.29□□□□□ -1.4
SNX6-208ENST00000556712 SND1-IT1Q9HBX3 110 aa6.29□□□□□ -1.4
SNX6-208ENST00000556712 TP73-AS1Q9UF72 201 aa6.29□□□□□ -1.4
SNX6-208ENST00000556712 PLA2G2DQ9UNK4 145 aa6.29□□□□□ -1.4
SNX6-208ENST00000556712 IGLV5-37A0A075B6J1 123 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 HIST1H2BKO60814 126 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 HIST1H2BJP06899 126 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 HIST1H2BOP23527 126 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 HIST1H2BBP33778 126 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 HIST1H2BDP58876 126 aa6.28□□□□□ -1.4
SNX6-208ENST00000556712 TSPEAR-AS2P59090 65 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms