RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 CSMD3Q7Z407 3707 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 CNTRLQ7Z7A1 2325 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 DEFB119Q8N690 84 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 KRTAP4-4Q9BYR3 166 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 KIF25-AS1Q9Y6Z4 181 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 MON2Q7Z3U7 1717 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 MGAMO43451 1857 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 CDK5RAP2Q96SN8 1893 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 IGFL4Q6B9Z1 124 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 DEFB105AQ8NG35 78 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 NOP10Q9NPE3 64 aaKnown RBP1.18□□□□□ -2.22
KTN1-224ENST00000556631 PRO0255Q9UI72 69 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 ZNF861PO60384 105 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 Q5VV11 94 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 FER1L6Q2WGJ9 1857 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 NUP210Q8TEM1 1887 aaPredicted RBP1.18□□□□□ -2.22
KTN1-224ENST00000556631 GTF3C1Q12789 2109 aa1.18□□□□□ -2.22
KTN1-224ENST00000556631 H3BSH0 61 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 WFDC13Q8IUB5 93 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 INTS1Q8N201 2190 aaKnown RBP1.17□□□□□ -2.22
KTN1-224ENST00000556631 ASCC3Q8N3C0 2202 aaKnown RBP1.17□□□□□ -2.22
KTN1-224ENST00000556631 COL4A4P53420 1690 aaPredicted RBP1.17□□□□□ -2.22
KTN1-224ENST00000556631 N4BP2Q86UW6 1770 aaPredicted RBP1.17□□□□□ -2.22
KTN1-224ENST00000556631 A0A0G2JQZ4 141 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 PLXND1Q9Y4D7 1925 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 MCM3APO60318 1980 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 ARFGEF3Q5TH69 2177 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 CADP27708 2225 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 A0A1W2PNN7 141 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 HCRTO43612 131 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 ARHGAP5-AS1Q96IT6 56 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 MAP2P11137 1827 aaKnown RBP1.17□□□□□ -2.22
KTN1-224ENST00000556631 RGPD2P0DJD1 1756 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 ZNF407Q9C0G0 2248 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 ESPL1Q14674 2120 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 C2orf16Q68DN1 1984 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 ANGP03950 147 aaKnown RBP1.17□□□□□ -2.22
KTN1-224ENST00000556631 IGFL1Q6UW32 110 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 Q8N9P0 234 aaPredicted RBP1.17□□□□□ -2.22
KTN1-224ENST00000556631 PROK2Q9HC23 129 aa1.17□□□□□ -2.22
KTN1-224ENST00000556631 DOCK10Q96BY6 2186 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 PLXNB1O43157 2135 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 KNL1Q8NG31 2342 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 KMT2EQ8IZD2 1858 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 AHCTF1Q8WYP5 2266 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 BOD1L1Q8NFC6 3051 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 KNTC1P50748 2209 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 ALPK2Q86TB3 2170 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 DEFB131BA0A096LNP1 70 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 CASP8AP2Q9UKL3 1982 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 UBR3Q6ZT12 1888 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 LRRC37AA6NMS7 1700 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 PCNX3Q9H6A9 2034 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 A0A1W2PNM2 257 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 A0A1W2PNU3 283 aaPredicted RBP1.16□□□□□ -2.22
KTN1-224ENST00000556631 PRLHP81277 87 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 PCOTHQ58A44 107 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 PLAC4Q8WY50 150 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 KAAG1Q9UBP8 84 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 CLPSP04118 112 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 Q8IZM0 81 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 URB1O60287 2271 aaKnown RBP1.16□□□□□ -2.22
KTN1-224ENST00000556631 FANCMQ8IYD8 2048 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 TRPM6Q9BX84 2022 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 ZNFX1Q9P2E3 1918 aaKnown RBP1.16□□□□□ -2.22
KTN1-224ENST00000556631 COL4A1P02462 1669 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 Q8NDZ9 215 aa1.16□□□□□ -2.22
KTN1-224ENST00000556631 DSCAML1Q8TD84 2053 aa1.15□□□□□ -2.22
KTN1-224ENST00000556631 UNC13CQ8NB66 2214 aa1.15□□□□□ -2.22
KTN1-224ENST00000556631 SEC16AO15027 2179 aa1.15□□□□□ -2.22
KTN1-224ENST00000556631 SPINK14Q6IE38 97 aa1.15□□□□□ -2.22
KTN1-224ENST00000556631 IGFL3Q6UXB1 125 aa1.15□□□□□ -2.22
KTN1-224ENST00000556631 APLNQ9ULZ1 77 aa1.15□□□□□ -2.22
KTN1-224ENST00000556631 VWA8A3KMH1 1905 aa1.15□□□□□ -2.22
KTN1-224ENST00000556631 KRTAP4-16G5E9R7 235 aaPredicted RBP1.15□□□□□ -2.23
KTN1-224ENST00000556631 LOC110117498A0A087WWA1 95 aa1.15□□□□□ -2.23
KTN1-224ENST00000556631 COX6B1P14854 86 aa1.15□□□□□ -2.23
KTN1-224ENST00000556631 DEFB131AP59861 70 aa1.15□□□□□ -2.23
KTN1-224ENST00000556631 C15orf56Q8N910 161 aa1.15□□□□□ -2.23
KTN1-224ENST00000556631 NACAE9PAV3 2078 aa1.15□□□□□ -2.23
KTN1-224ENST00000556631 NCKAP5O14513 1909 aa1.15□□□□□ -2.23
KTN1-224ENST00000556631 SIPA1L3O60292 1781 aaPredicted RBP1.15□□□□□ -2.23
KTN1-224ENST00000556631 TET2Q6N021 2002 aaPredicted RBP1.15□□□□□ -2.23
KTN1-224ENST00000556631 ICE1Q9Y2F5 2266 aa1.15□□□□□ -2.23
KTN1-224ENST00000556631 CACNA1CQ13936 2221 aa1.15□□□□□ -2.23
KTN1-224ENST00000556631 B4DSR2 109 aa1.15□□□□□ -2.23
KTN1-224ENST00000556631 NDUFA1O15239 70 aa1.15□□□□□ -2.23
KTN1-224ENST00000556631 PHIPQ8WWQ0 1821 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 MUC4Q99102 2169 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 MYH7BA7E2Y1 1941 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 DOPEY2Q9Y3R5 2298 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 MED12LQ86YW9 2145 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 DSCR10P59022 87 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 LINC00612Q8N6U2 182 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 DNAJC13O75165 2243 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 A0A0G2JMZ2 1700 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 LRRC37A2A6NM11 1700 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 AKAP6Q13023 2319 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 CACNA1EQ15878 2313 aa1.14□□□□□ -2.23
KTN1-224ENST00000556631 KRTAP5-11Q6L8G4 156 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms