RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SH2D6Q7Z4S9 175 aa4.74□□□□□ -1.65
SLIRP-204ENST00000555890 PLEKHB2Q96CS7 222 aa4.74□□□□□ -1.65
SLIRP-204ENST00000555890 CHCHD5Q9BSY4 110 aa4.74□□□□□ -1.65
SLIRP-204ENST00000555890 Q9H8V8 135 aa4.74□□□□□ -1.65
SLIRP-204ENST00000555890 A6NDN8 102 aa4.73□□□□□ -1.65
SLIRP-204ENST00000555890 ZNF815PA8K554 130 aa4.73□□□□□ -1.65
SLIRP-204ENST00000555890 LEPROTO15243 131 aa4.73□□□□□ -1.65
SLIRP-204ENST00000555890 ZNF22P17026 224 aaPredicted RBP4.73□□□□□ -1.65
SLIRP-204ENST00000555890 LGALS3P17931 250 aaKnown RBP4.73□□□□□ -1.65
SLIRP-204ENST00000555890 HERVK_113P63121 156 aa4.73□□□□□ -1.65
SLIRP-204ENST00000555890 MRPL23Q16540 153 aaKnown RBP4.73□□□□□ -1.65
SLIRP-204ENST00000555890 BVES-AS1Q5T3Y7 98 aa4.73□□□□□ -1.65
SLIRP-204ENST00000555890 C10orf25Q5T742 122 aa4.73□□□□□ -1.65
SLIRP-204ENST00000555890 FAM104AQ969W3 186 aa4.73□□□□□ -1.65
SLIRP-204ENST00000555890 CDC42SE2Q9NRR3 84 aa4.73□□□□□ -1.65
SLIRP-204ENST00000555890 TP73-AS1Q9UF72 201 aa4.73□□□□□ -1.65
SLIRP-204ENST00000555890 LRP1BQ9NZR2 4599 aa4.73□□□□□ -1.65
SLIRP-204ENST00000555890 TRAV26-1A0A087WT03 109 aa4.72□□□□□ -1.65
SLIRP-204ENST00000555890 A0A1B0GV90 55 aa4.72□□□□□ -1.65
SLIRP-204ENST00000555890 J3QQQ9 107 aa4.72□□□□□ -1.65
SLIRP-204ENST00000555890 UBE2D1P51668 147 aa4.72□□□□□ -1.65
SLIRP-204ENST00000555890 GAGE6Q13070 117 aa4.72□□□□□ -1.65
SLIRP-204ENST00000555890 RNASE13Q5GAN3 156 aaKnown RBP4.72□□□□□ -1.65
SLIRP-204ENST00000555890 SCGB1D4Q6XE38 83 aa4.72□□□□□ -1.65
SLIRP-204ENST00000555890 FAM19A3Q7Z5A8 133 aa4.72□□□□□ -1.65
SLIRP-204ENST00000555890 ORAOV1Q8WV07 137 aa4.72□□□□□ -1.65
SLIRP-204ENST00000555890 TTTY13Q9BZ97 58 aa4.72□□□□□ -1.65
SLIRP-204ENST00000555890 CELA1Q9UNI1 258 aa4.72□□□□□ -1.65
SLIRP-204ENST00000555890 A0A0J9YY99 117 aa4.71□□□□□ -1.66
SLIRP-204ENST00000555890 EPM2AB3EWF7 344 aa4.71□□□□□ -1.66
SLIRP-204ENST00000555890 HTN3P15516 51 aa4.71□□□□□ -1.66
SLIRP-204ENST00000555890 LINC00469Q8N7U9 141 aa4.71□□□□□ -1.66
SLIRP-204ENST00000555890 VSIG2Q96IQ7 327 aa4.71□□□□□ -1.66
SLIRP-204ENST00000555890 HIST1H4GQ99525 98 aa4.71□□□□□ -1.66
SLIRP-204ENST00000555890 C11orf68Q9H3H3 251 aaKnown RBP4.71□□□□□ -1.66
SLIRP-204ENST00000555890 ICOSQ9Y6W8 199 aa4.71□□□□□ -1.66
SLIRP-204ENST00000555890 DNAH5Q8TE73 4624 aa4.7□□□□□ -1.66
SLIRP-204ENST00000555890 IGLV5-45A0A087WSX0 123 aa4.7□□□□□ -1.66
SLIRP-204ENST00000555890 TRAV13-1A0A0B4J241 112 aa4.7□□□□□ -1.66
SLIRP-204ENST00000555890 IGHV1-58A0A0C4DH39 117 aa4.7□□□□□ -1.66
SLIRP-204ENST00000555890 A0A1B0GUV1 79 aa4.7□□□□□ -1.66
SLIRP-204ENST00000555890 TMEM262E9PQX1 116 aa4.7□□□□□ -1.66
SLIRP-204ENST00000555890 H3BNG1 76 aa4.7□□□□□ -1.66
SLIRP-204ENST00000555890 C12orf74Q32Q52 190 aa4.7□□□□□ -1.66
SLIRP-204ENST00000555890 TM2D3Q9BRN9 247 aa4.7□□□□□ -1.66
SLIRP-204ENST00000555890 RETNQ9HD89 108 aa4.7□□□□□ -1.66
SLIRP-204ENST00000555890 LRP2P98164 4655 aa4.7□□□□□ -1.66
SLIRP-204ENST00000555890 IGHV3-64A0A075B6Q5 118 aa4.69□□□□□ -1.66
SLIRP-204ENST00000555890 CCL25O15444 150 aa4.69□□□□□ -1.66
SLIRP-204ENST00000555890 SMIM13P0DJ93 91 aa4.69□□□□□ -1.66
SLIRP-204ENST00000555890 IGHV3-30-3P0DP02 117 aa4.69□□□□□ -1.66
SLIRP-204ENST00000555890 SRSF9Q13242 221 aaKnown RBP eCLIP4.69□□□□□ -1.66
SLIRP-204ENST00000555890 LINC00242Q5T6M2 205 aa4.69□□□□□ -1.66
SLIRP-204ENST00000555890 CEND1Q8N111 149 aa4.69□□□□□ -1.66
SLIRP-204ENST00000555890 CDKN2A-AS1Q9UH64 79 aa4.69□□□□□ -1.66
SLIRP-204ENST00000555890 A0A096LPF7 62 aa4.68□□□□□ -1.66
SLIRP-204ENST00000555890 IGLV5-39A0A0G2JS06 123 aa4.68□□□□□ -1.66
SLIRP-204ENST00000555890 F8WDY8 70 aa4.68□□□□□ -1.66
SLIRP-204ENST00000555890 SPINK8P0C7L1 97 aa4.68□□□□□ -1.66
SLIRP-204ENST00000555890 TSPEAR-AS2P59090 65 aa4.68□□□□□ -1.66
SLIRP-204ENST00000555890 RBX1P62877 108 aa4.68□□□□□ -1.66
SLIRP-204ENST00000555890 COX6A2Q02221 97 aa4.68□□□□□ -1.66
SLIRP-204ENST00000555890 SS18Q15532 418 aa4.68□□□□□ -1.66
SLIRP-204ENST00000555890 LELP1Q5T871 98 aa4.68□□□□□ -1.66
SLIRP-204ENST00000555890 C11orf45Q8TAV5 145 aa4.68□□□□□ -1.66
SLIRP-204ENST00000555890 SPANXB1Q9NS25 103 aaPredicted RBP4.68□□□□□ -1.66
SLIRP-204ENST00000555890 FAT1Q14517 4588 aa4.67□□□□□ -1.66
SLIRP-204ENST00000555890 IGLV4-60A0A075B6I1 120 aa4.67□□□□□ -1.66
SLIRP-204ENST00000555890 TRAV8-3A0A0A6YYJ7 113 aa4.67□□□□□ -1.66
SLIRP-204ENST00000555890 IGKV3OR2-268A0A0C4DH90 116 aa4.67□□□□□ -1.66
SLIRP-204ENST00000555890 A0A0J9YWU9 116 aa4.67□□□□□ -1.66
SLIRP-204ENST00000555890 TMEM238C9JI98 176 aa4.67□□□□□ -1.66
SLIRP-204ENST00000555890 TAX1BP3O14907 124 aa4.67□□□□□ -1.66
SLIRP-204ENST00000555890 CD164L2Q6UWJ8 174 aa4.67□□□□□ -1.66
SLIRP-204ENST00000555890 NDUFA12Q9UI09 145 aa4.67□□□□□ -1.66
SLIRP-204ENST00000555890 COX11Q9Y6N1 276 aa4.67□□□□□ -1.66
SLIRP-204ENST00000555890 A0A0J9YXY3 114 aa4.66□□□□□ -1.66
SLIRP-204ENST00000555890 LINC00959A0A1B0GUT2 108 aa4.66□□□□□ -1.66
SLIRP-204ENST00000555890 FXYD2P54710 66 aa4.66□□□□□ -1.66
SLIRP-204ENST00000555890 CIRBPQ14011 172 aaKnown RBP4.66□□□□□ -1.66
SLIRP-204ENST00000555890 LYPD5Q6UWN5 251 aa4.66□□□□□ -1.66
SLIRP-204ENST00000555890 Q6ZTC4 211 aa4.66□□□□□ -1.66
SLIRP-204ENST00000555890 DEFB131BA0A096LNP1 70 aa4.65□□□□□ -1.67
SLIRP-204ENST00000555890 SMIM1B2RUZ4 78 aa4.65□□□□□ -1.67
SLIRP-204ENST00000555890 NDUFA1O15239 70 aa4.65□□□□□ -1.67
SLIRP-204ENST00000555890 TIMM17BO60830 172 aa4.65□□□□□ -1.67
SLIRP-204ENST00000555890 ANGP03950 147 aaKnown RBP4.65□□□□□ -1.67
SLIRP-204ENST00000555890 NANOS2P60321 138 aaKnown RBP4.65□□□□□ -1.67
SLIRP-204ENST00000555890 VAMP3Q15836 100 aa4.65□□□□□ -1.67
SLIRP-204ENST00000555890 Q6ZVH6 145 aa4.65□□□□□ -1.67
SLIRP-204ENST00000555890 NHP2Q9NX24 153 aaKnown RBP4.65□□□□□ -1.67
SLIRP-204ENST00000555890 A0A087WZ39 114 aa4.64□□□□□ -1.67
SLIRP-204ENST00000555890 TRAV10A0A0B4J240 114 aa4.64□□□□□ -1.67
SLIRP-204ENST00000555890 HERV-K104P63124 156 aa4.64□□□□□ -1.67
SLIRP-204ENST00000555890 RPL24P83731 157 aaKnown RBP4.64□□□□□ -1.67
SLIRP-204ENST00000555890 SFTA2Q6UW10 78 aa4.64□□□□□ -1.67
SLIRP-204ENST00000555890 LINC01561Q8N1V8 128 aa4.64□□□□□ -1.67
SLIRP-204ENST00000555890 LINC00269Q8N2A0 174 aa4.64□□□□□ -1.67
SLIRP-204ENST00000555890 C10orf126Q8N4M7 172 aa4.64□□□□□ -1.67
SLIRP-204ENST00000555890 COX7B2Q8TF08 81 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms