RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 IGHV7-4-1A0A0J9YVY3 117 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 A0A1W2PQD3 144 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 IBA57-AS1B1ANH7 110 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 F2Z2F3 143 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 H0YGG7 62 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 ASAH2BP0C7U1 165 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 IGHV3-30-3P0DP02 117 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 RNASE2P10153 161 aaKnown RBP1.91□□□□□ -2.1
SRP54-209ENST00000555746 UBE2G1P62253 170 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 RBM3P98179 157 aaKnown RBP1.91□□□□□ -2.1
SRP54-209ENST00000555746 MOBPQ13875 183 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 RHOHQ15669 191 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 LUZP6Q538Z0 58 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 PSMG4Q5JS54 123 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 TMEM170BQ5T4T1 132 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 SPANXN1Q5VSR9 72 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 TMEM256Q8N2U0 113 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 ZFAND2AQ8N6M9 145 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 LINC01600Q96MT4 127 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 LINC00467Q9BRT7 94 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 C8orf17Q9NRJ1 99 aa1.91□□□□□ -2.1
SRP54-209ENST00000555746 MRPL35Q9NZE8 188 aaKnown RBP1.91□□□□□ -2.1
SRP54-209ENST00000555746 FAT4Q6V0I7 4981 aa1.9□□□□□ -2.1
SRP54-209ENST00000555746 TNCP24821 2201 aa1.9□□□□□ -2.1
SRP54-209ENST00000555746 IGHV3-49A0A0A0MS15 119 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 IGHV3-21A0A0B4J1V1 117 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 LOC285095A0A1B0GVY8 99 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 TMEM223A0PJW6 202 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 CLPSL1A2RUU4 121 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 NPYP01303 97 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 IGHV1-69P01742 117 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 MSMBP08118 114 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 CCL3P10147 92 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 ZNF816Q0VGE8 651 aaPredicted RBP1.9□□□□□ -2.11
SRP54-209ENST00000555746 Q1T7F1 81 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 RNASE13Q5GAN3 156 aaKnown RBP1.9□□□□□ -2.11
SRP54-209ENST00000555746 S100A7L2Q5SY68 101 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 RPL7L1Q6DKI1 246 aaKnown RBP1.9□□□□□ -2.11
SRP54-209ENST00000555746 CNEP1R1Q8N9A8 125 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 PFN4Q8NHR9 129 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 ODF3Q96PU9 254 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 RETNLBQ9BQ08 111 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 SMIM7Q9BQ49 75 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 CHCHD7Q9BUK0 85 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 GABARAPL1Q9H0R8 117 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 C11orf1Q9H5F2 150 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 MANBALQ9NQG1 85 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 ALMS1Q8TCU4 4167 aa1.9□□□□□ -2.11
SRP54-209ENST00000555746 FAT2Q9NYQ8 4349 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 ARHGAP32A7KAX9 2087 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 IGLV3-9A0A075B6K5 115 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 TRAV3A0A0B4J244 114 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 A0A0G2JND7 137 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 C17orf51A8MQB3 221 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 SLC25A20O43772 301 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 BCE1O60756 84 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 LHBP01229 141 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 COX8AP10176 69 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 CMC4P56277 68 aaPredicted RBP1.89□□□□□ -2.11
SRP54-209ENST00000555746 MIAQ16674 131 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 SLC48A1Q6P1K1 146 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 CYP2G1PQ6ZSU1 146 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 LINC00643Q86TS7 51 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 DEFB107AQ8IZN7 70 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 DYNLRB2Q8TF09 96 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 Q96M85 177 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 SLC50A1Q9BRV3 221 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 SCRT1Q9BWW7 348 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 NHP2Q9NX24 153 aaKnown RBP1.89□□□□□ -2.11
SRP54-209ENST00000555746 HIGD1BQ9P298 99 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 SORL1Q92673 2214 aa1.89□□□□□ -2.11
SRP54-209ENST00000555746 HMCN2Q8NDA2 5059 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 IGKV1D-17A0A075B6S4 117 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 TRAV13-2A0A0B4J235 113 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 LOC107984156A0A0G2JMH3 177 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 TCRBV4S1A1TA0A5B7 111 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 hDV103S1A0JD37 113 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 A6NED7 52 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 A6NIN4 97 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 B4DSR2 109 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 BPY2O14599 106 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 SH2D1AO60880 128 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 LY6G6CO95867 125 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 APCSP02743 223 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 C3orf79P0CE67 100 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 CGB3P0DN86 165 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 CGB7P0DN87 165 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 SUPT4H1P63272 117 aaKnown RBP1.88□□□□□ -2.11
SRP54-209ENST00000555746 ESRGQ1W209 222 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 ZNF791Q3KP31 576 aaPredicted RBP1.88□□□□□ -2.11
SRP54-209ENST00000555746 DEFB134Q4QY38 66 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 C6orf201Q7Z4U5 140 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 BAGE3Q86Y29 109 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 BAGE2Q86Y30 109 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 ARL17AQ8IVW1 177 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 LINC00269Q8N2A0 174 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 SMCR5Q8TEV8 140 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 TMEM141Q96I45 108 aa1.88□□□□□ -2.11
SRP54-209ENST00000555746 DYNLRB1Q9NP97 96 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms