RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 FAM231DQ6ZW35 169 aa5.09□□□□□ -1.59
PRKCH-218ENST00000555628 MRPL55Q7Z7F7 128 aaKnown RBP5.09□□□□□ -1.59
PRKCH-218ENST00000555628 XAGE1AQ9HD64 81 aa5.09□□□□□ -1.59
PRKCH-218ENST00000555628 SPANXA1Q9NS26 97 aa5.09□□□□□ -1.59
PRKCH-218ENST00000555628 MED9Q9NWA0 146 aa5.09□□□□□ -1.59
PRKCH-218ENST00000555628 C5orf52A6NGY3 159 aa5.08□□□□□ -1.6
PRKCH-218ENST00000555628 ZNF727A8MUV8 499 aa5.08□□□□□ -1.6
PRKCH-218ENST00000555628 SMLR1H3BR10 107 aa5.08□□□□□ -1.6
PRKCH-218ENST00000555628 CFC1BP0CG36 223 aa5.08□□□□□ -1.6
PRKCH-218ENST00000555628 RPL32P62910 135 aaKnown RBP5.08□□□□□ -1.6
PRKCH-218ENST00000555628 LINC00469Q8N7U9 141 aa5.08□□□□□ -1.6
PRKCH-218ENST00000555628 SSPOA2VEC9 5147 aa5.07□□□□□ -1.6
PRKCH-218ENST00000555628 A0A1B0GUT8 65 aa5.07□□□□□ -1.6
PRKCH-218ENST00000555628 IFITM10A6NMD0 228 aa5.07□□□□□ -1.6
PRKCH-218ENST00000555628 A8MWL6 223 aa5.07□□□□□ -1.6
PRKCH-218ENST00000555628 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
PRKCH-218ENST00000555628 HBBP68871 147 aa5.07□□□□□ -1.6
PRKCH-218ENST00000555628 LINC01561Q8N1V8 128 aa5.07□□□□□ -1.6
PRKCH-218ENST00000555628 C3orf22Q8N5N4 141 aa5.07□□□□□ -1.6
PRKCH-218ENST00000555628 LINC00167Q96N53 147 aa5.07□□□□□ -1.6
PRKCH-218ENST00000555628 KIR2DL4Q99706 377 aa5.07□□□□□ -1.6
PRKCH-218ENST00000555628 IGLV5-37A0A075B6J1 123 aa5.06□□□□□ -1.6
PRKCH-218ENST00000555628 TRBV24-1A0A075B6N3 115 aa5.06□□□□□ -1.6
PRKCH-218ENST00000555628 TGIF2-C20orf24A0A0A6YYL0 155 aa5.06□□□□□ -1.6
PRKCH-218ENST00000555628 HIGD1CA8MV81 97 aa5.06□□□□□ -1.6
PRKCH-218ENST00000555628 IGKV2D-26A0A0A0MRZ7 120 aa5.05□□□□□ -1.6
PRKCH-218ENST00000555628 RPL37AP8A6NKH3 93 aa5.05□□□□□ -1.6
PRKCH-218ENST00000555628 HMSDA8MTL9 139 aa5.05□□□□□ -1.6
PRKCH-218ENST00000555628 PPP1R2P9O14990 202 aa5.05□□□□□ -1.6
PRKCH-218ENST00000555628 GATCO43716 136 aaKnown RBP5.05□□□□□ -1.6
PRKCH-218ENST00000555628 PPP1R17O96001 155 aa5.05□□□□□ -1.6
PRKCH-218ENST00000555628 TMEM18Q96B42 140 aa5.05□□□□□ -1.6
PRKCH-218ENST00000555628 C20orf78Q9BR46 151 aa5.05□□□□□ -1.6
PRKCH-218ENST00000555628 USH2AO75445 5202 aa5.04□□□□□ -1.6
PRKCH-218ENST00000555628 IGLV4-3A0A075B6K6 122 aa5.04□□□□□ -1.6
PRKCH-218ENST00000555628 MRPL51Q4U2R6 128 aaKnown RBP5.04□□□□□ -1.6
PRKCH-218ENST00000555628 Q8IZM0 81 aa5.04□□□□□ -1.6
PRKCH-218ENST00000555628 LINC00337Q8N6G1 96 aa5.04□□□□□ -1.6
PRKCH-218ENST00000555628 SMIM2Q9BVW6 85 aa5.04□□□□□ -1.6
PRKCH-218ENST00000555628 PNRC1Q12796 327 aaPredicted RBP5.03□□□□□ -1.6
PRKCH-218ENST00000555628 FAM104BQ5XKR9 115 aa5.03□□□□□ -1.6
PRKCH-218ENST00000555628 SPAG11AQ6PDA7 123 aa5.03□□□□□ -1.6
PRKCH-218ENST00000555628 PYGO1Q9Y3Y4 419 aa5.03□□□□□ -1.6
PRKCH-218ENST00000555628 TCAPO15273 167 aa5.02□□□□□ -1.61
PRKCH-218ENST00000555628 PRLHP81277 87 aa5.02□□□□□ -1.61
PRKCH-218ENST00000555628 PLEKHB2Q96CS7 222 aa5.02□□□□□ -1.61
PRKCH-218ENST00000555628 FCGBPQ9Y6R7 5405 aaPredicted RBP5.02□□□□□ -1.61
PRKCH-218ENST00000555628 KANTRA0A1W2PQU2 76 aa5.01□□□□□ -1.61
PRKCH-218ENST00000555628 UBE2AP49459 152 aa5.01□□□□□ -1.61
PRKCH-218ENST00000555628 FAM19A3Q7Z5A8 133 aa5.01□□□□□ -1.61
PRKCH-218ENST00000555628 BORCS7Q96B45 105 aa5.01□□□□□ -1.61
PRKCH-218ENST00000555628 LINC00862A6NCI5 91 aa5□□□□□ -1.61
PRKCH-218ENST00000555628 F8VRH5 84 aa5□□□□□ -1.61
PRKCH-218ENST00000555628 TMEM250H0YL14 139 aa5□□□□□ -1.61
PRKCH-218ENST00000555628 TAGLN2P37802 199 aaKnown RBP5□□□□□ -1.61
PRKCH-218ENST00000555628 ZC2HC1BQ5TFG8 222 aa5□□□□□ -1.61
PRKCH-218ENST00000555628 LINC01551Q86U37 167 aa5□□□□□ -1.61
PRKCH-218ENST00000555628 AMELXQ99217 191 aa5□□□□□ -1.61
PRKCH-218ENST00000555628 V9GYV3 84 aa5□□□□□ -1.61
PRKCH-218ENST00000555628 TEX46H3BTG2 121 aa4.99□□□□□ -1.61
PRKCH-218ENST00000555628 SCO1O75880 301 aa4.99□□□□□ -1.61
PRKCH-218ENST00000555628 NPYP01303 97 aa4.99□□□□□ -1.61
PRKCH-218ENST00000555628 CKS1BP61024 79 aa4.99□□□□□ -1.61
PRKCH-218ENST00000555628 Q6ZN92 141 aa4.99□□□□□ -1.61
PRKCH-218ENST00000555628 TMEM141Q96I45 108 aa4.99□□□□□ -1.61
PRKCH-218ENST00000555628 EIF5A2Q9GZV4 153 aaKnown RBP4.99□□□□□ -1.61
PRKCH-218ENST00000555628 OSTCQ9NRP0 149 aa4.99□□□□□ -1.61
PRKCH-218ENST00000555628 M0R378 163 aa4.98□□□□□ -1.61
PRKCH-218ENST00000555628 IFI27P40305 119 aaPredicted RBP4.98□□□□□ -1.61
PRKCH-218ENST00000555628 RIGQ13278 110 aa4.98□□□□□ -1.61
PRKCH-218ENST00000555628 TMEM126AQ9H061 195 aa4.98□□□□□ -1.61
PRKCH-218ENST00000555628 TOMM7Q9P0U1 55 aa4.98□□□□□ -1.61
PRKCH-218ENST00000555628 IGKV2-28A0A075B6P5 120 aa4.97□□□□□ -1.61
PRKCH-218ENST00000555628 IGLV5-39A0A0G2JS06 123 aa4.97□□□□□ -1.61
PRKCH-218ENST00000555628 TMEM238C9JI98 176 aa4.97□□□□□ -1.61
PRKCH-218ENST00000555628 D6R8Y8 96 aa4.97□□□□□ -1.61
PRKCH-218ENST00000555628 IGKV2D-28P01615 120 aa4.97□□□□□ -1.61
PRKCH-218ENST00000555628 C6orf226Q5I0X4 101 aa4.97□□□□□ -1.61
PRKCH-218ENST00000555628 Q8N377 158 aa4.97□□□□□ -1.61
PRKCH-218ENST00000555628 Q8NBF4 154 aa4.97□□□□□ -1.61
PRKCH-218ENST00000555628 SPRR4Q96PI1 79 aa4.97□□□□□ -1.61
PRKCH-218ENST00000555628 ALKBH7Q9BT30 221 aaPredicted RBP4.97□□□□□ -1.61
PRKCH-218ENST00000555628 PRSS2P07478 247 aa4.96□□□□□ -1.62
PRKCH-218ENST00000555628 CKS2P33552 79 aa4.96□□□□□ -1.62
PRKCH-218ENST00000555628 C2orf66Q6UXQ4 117 aa4.96□□□□□ -1.62
PRKCH-218ENST00000555628 TEX43Q6ZNM6 134 aa4.96□□□□□ -1.62
PRKCH-218ENST00000555628 DAND5Q8N907 189 aa4.96□□□□□ -1.62
PRKCH-218ENST00000555628 MPLKIPQ8TAP9 179 aa4.96□□□□□ -1.62
PRKCH-218ENST00000555628 CDKN2A-AS1Q9UH64 79 aa4.96□□□□□ -1.62
PRKCH-218ENST00000555628 A0A1B0GXF2 115 aa4.95□□□□□ -1.62
PRKCH-218ENST00000555628 SMIM1B2RUZ4 78 aa4.95□□□□□ -1.62
PRKCH-218ENST00000555628 SPINK1P00995 79 aa4.95□□□□□ -1.62
PRKCH-218ENST00000555628 CXCL5P42830 114 aa4.95□□□□□ -1.62
PRKCH-218ENST00000555628 RPS29P62273 56 aaKnown RBP4.95□□□□□ -1.62
PRKCH-218ENST00000555628 SNRPEP62304 92 aaKnown RBP4.95□□□□□ -1.62
PRKCH-218ENST00000555628 FAM74A3Q4VXF1 159 aa4.95□□□□□ -1.62
PRKCH-218ENST00000555628 Q8NDZ9 215 aa4.95□□□□□ -1.62
PRKCH-218ENST00000555628 IGKV2D-30A0A075B6S6 120 aa4.94□□□□□ -1.62
PRKCH-218ENST00000555628 SMIM27A0A1W2PRY6 76 aa4.94□□□□□ -1.62
PRKCH-218ENST00000555628 IGIPA6NJ69 53 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms