RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 C22orf24Q9Y442 160 aa11.29□□□□□ -0.6
TUBB3-209ENST00000555609 DNAL4O96015 105 aa11.28□□□□□ -0.6
TUBB3-209ENST00000555609 SMIM11BQ8TCY0 68 aa11.28□□□□□ -0.6
TUBB3-209ENST00000555609 Q8IZM0 81 aa11.27□□□□□ -0.6
TUBB3-209ENST00000555609 IGKV3OR2-268A0A0C4DH90 116 aa11.27□□□□□ -0.61
TUBB3-209ENST00000555609 C6orf226Q5I0X4 101 aa11.27□□□□□ -0.61
TUBB3-209ENST00000555609 ANK3Q12955 4377 aaKnown RBP11.26□□□□□ -0.61
TUBB3-209ENST00000555609 CXCL5P42830 114 aa11.26□□□□□ -0.61
TUBB3-209ENST00000555609 C5orf38Q86SI9 138 aa11.26□□□□□ -0.61
TUBB3-209ENST00000555609 TMEM126AQ9H061 195 aa11.26□□□□□ -0.61
TUBB3-209ENST00000555609 LY6G6DO95868 133 aa11.25□□□□□ -0.61
TUBB3-209ENST00000555609 ATP5G1P05496 136 aa11.25□□□□□ -0.61
TUBB3-209ENST00000555609 GYPEP15421 78 aa11.25□□□□□ -0.61
TUBB3-209ENST00000555609 PRO0255Q9UI72 69 aa11.25□□□□□ -0.61
TUBB3-209ENST00000555609 B5MCH6 92 aa11.25□□□□□ -0.61
TUBB3-209ENST00000555609 A0A1B0GX51 115 aa11.23□□□□□ -0.61
TUBB3-209ENST00000555609 LYRM9A8MSI8 78 aa11.23□□□□□ -0.61
TUBB3-209ENST00000555609 PAX4O43316 350 aa11.23□□□□□ -0.61
TUBB3-209ENST00000555609 DEFB130BP0DP73 79 aa11.23□□□□□ -0.61
TUBB3-209ENST00000555609 DEFB130AP0DP74 79 aa11.23□□□□□ -0.61
TUBB3-209ENST00000555609 OBSCN-AS1Q96MR7 158 aa11.23□□□□□ -0.61
TUBB3-209ENST00000555609 NSD1Q96L73 2696 aaPredicted RBP11.23□□□□□ -0.61
TUBB3-209ENST00000555609 COX17Q14061 63 aa11.22□□□□□ -0.61
TUBB3-209ENST00000555609 LINC00482Q8N8I6 264 aa11.22□□□□□ -0.61
TUBB3-209ENST00000555609 Q9HAA7 133 aa11.22□□□□□ -0.61
TUBB3-209ENST00000555609 SETD2Q9BYW2 2564 aaPredicted RBP11.22□□□□□ -0.61
TUBB3-209ENST00000555609 CCDC179H3BU77 68 aa11.21□□□□□ -0.61
TUBB3-209ENST00000555609 PFN2P35080 140 aa11.21□□□□□ -0.61
TUBB3-209ENST00000555609 X6R8D5 127 aa11.21□□□□□ -0.61
TUBB3-209ENST00000555609 NDUFC2O95298 119 aa11.21□□□□□ -0.62
TUBB3-209ENST00000555609 SMCR5Q8TEV8 140 aa11.21□□□□□ -0.62
TUBB3-209ENST00000555609 A0A087WYN8 130 aa11.2□□□□□ -0.62
TUBB3-209ENST00000555609 NIPBLQ6KC79 2804 aaeCLIP11.2□□□□□ -0.62
TUBB3-209ENST00000555609 CUBNO60494 3623 aa11.2□□□□□ -0.62
TUBB3-209ENST00000555609 HIVEP2P31629 2446 aa11.19□□□□□ -0.62
TUBB3-209ENST00000555609 XCL1P47992 114 aa11.19□□□□□ -0.62
TUBB3-209ENST00000555609 GAGE2AQ6NT46 116 aa11.19□□□□□ -0.62
TUBB3-209ENST00000555609 CD164L2Q6UWJ8 174 aa11.19□□□□□ -0.62
TUBB3-209ENST00000555609 OR13C6PQ8NH95 151 aa11.19□□□□□ -0.62
TUBB3-209ENST00000555609 MUC7Q8TAX7 377 aa11.19□□□□□ -0.62
TUBB3-209ENST00000555609 FN1P02751 2386 aaKnown RBP11.19□□□□□ -0.62
TUBB3-209ENST00000555609 LINC00167Q96N53 147 aa11.18□□□□□ -0.62
TUBB3-209ENST00000555609 WNK1Q9H4A3 2382 aa11.17□□□□□ -0.62
TUBB3-209ENST00000555609 IGHV4-28A0A0C4DH34 117 aa11.17□□□□□ -0.62
TUBB3-209ENST00000555609 KLK5Q9Y337 293 aaPredicted RBP11.17□□□□□ -0.62
TUBB3-209ENST00000555609 NF1P21359 2839 aa11.16□□□□□ -0.62
TUBB3-209ENST00000555609 FAM236AA0A1B0GUQ0 79 aa11.16□□□□□ -0.62
TUBB3-209ENST00000555609 FAM236BA0A1B0GV22 79 aa11.16□□□□□ -0.62
TUBB3-209ENST00000555609 LECT2O14960 151 aa11.16□□□□□ -0.62
TUBB3-209ENST00000555609 C9orf66Q5T8R8 295 aa11.16□□□□□ -0.62
TUBB3-209ENST00000555609 ORMDL1Q9P0S3 153 aa11.16□□□□□ -0.62
TUBB3-209ENST00000555609 KIAA0087Q14695 138 aa11.15□□□□□ -0.63
TUBB3-209ENST00000555609 INAFM1C9JVW0 142 aa11.14□□□□□ -0.63
TUBB3-209ENST00000555609 KRTAP10-3P60369 221 aa11.14□□□□□ -0.63
TUBB3-209ENST00000555609 SMIM20Q8N5G0 67 aa11.13□□□□□ -0.63
TUBB3-209ENST00000555609 APOC4P55056 127 aa11.12□□□□□ -0.63
TUBB3-209ENST00000555609 JMJD1CQ15652 2540 aa11.12□□□□□ -0.63
TUBB3-209ENST00000555609 JMJD7-PLA2G4BH0Y9G9 81 aa11.12□□□□□ -0.63
TUBB3-209ENST00000555609 Q6JHZ5 121 aa11.12□□□□□ -0.63
TUBB3-209ENST00000555609 LINC00269Q8N2A0 174 aa11.11□□□□□ -0.63
TUBB3-209ENST00000555609 CHCHD10Q8WYQ3 142 aaPredicted RBP11.11□□□□□ -0.63
TUBB3-209ENST00000555609 C11orf68Q9H3H3 251 aaKnown RBP11.1□□□□□ -0.63
TUBB3-209ENST00000555609 TMEM256-PLSCR3K7ERE1 68 aa11.1□□□□□ -0.63
TUBB3-209ENST00000555609 C14orf132Q9NPU4 83 aa11.1□□□□□ -0.63
TUBB3-209ENST00000555609 NOTCH3Q9UM47 2321 aa11.1□□□□□ -0.63
TUBB3-209ENST00000555609 UQCRQO14949 82 aa11.09□□□□□ -0.63
TUBB3-209ENST00000555609 REG3AQ06141 175 aa11.09□□□□□ -0.63
TUBB3-209ENST00000555609 NANOS2P60321 138 aaKnown RBP11.08□□□□□ -0.64
TUBB3-209ENST00000555609 HIST1H4AP62805 103 aaKnown RBP11.08□□□□□ -0.64
TUBB3-209ENST00000555609 C3orf22Q8N5N4 141 aa11.08□□□□□ -0.64
TUBB3-209ENST00000555609 Q8N814 137 aa11.08□□□□□ -0.64
TUBB3-209ENST00000555609 CCKP06307 115 aa11.08□□□□□ -0.64
TUBB3-209ENST00000555609 DAD1P61803 113 aa11.08□□□□□ -0.64
TUBB3-209ENST00000555609 S100A7L2Q5SY68 101 aa11.08□□□□□ -0.64
TUBB3-209ENST00000555609 ATOX1O00244 68 aa11.07□□□□□ -0.64
TUBB3-209ENST00000555609 ANGP03950 147 aaKnown RBP11.07□□□□□ -0.64
TUBB3-209ENST00000555609 MIFP14174 115 aa11.07□□□□□ -0.64
TUBB3-209ENST00000555609 CLPSL2Q6UWE3 100 aa11.07□□□□□ -0.64
TUBB3-209ENST00000555609 C9orf129Q5T035 196 aaKnown RBP11.06□□□□□ -0.64
TUBB3-209ENST00000555609 C2CD3Q4AC94 2353 aa11.06□□□□□ -0.64
TUBB3-209ENST00000555609 A0A096LPF7 62 aa11.06□□□□□ -0.64
TUBB3-209ENST00000555609 NCR3O14931 201 aa11.05□□□□□ -0.64
TUBB3-209ENST00000555609 LELP1Q5T871 98 aa11.05□□□□□ -0.64
TUBB3-209ENST00000555609 LINC00526Q96FQ7 95 aa11.05□□□□□ -0.64
TUBB3-209ENST00000555609 H3BQ85 93 aa11.04□□□□□ -0.64
TUBB3-209ENST00000555609 LINC00846Q9NV44 126 aa11.04□□□□□ -0.64
TUBB3-209ENST00000555609 A0A0J9YWU9 116 aa11.04□□□□□ -0.64
TUBB3-209ENST00000555609 SLPIP03973 132 aa11.04□□□□□ -0.64
TUBB3-209ENST00000555609 IGHV4-30-4P0DP06 118 aa11.04□□□□□ -0.64
TUBB3-209ENST00000555609 SPART-AS1P0CW21 52 aa11.02□□□□□ -0.64
TUBB3-209ENST00000555609 COX7CP15954 63 aa11.02□□□□□ -0.64
TUBB3-209ENST00000555609 DEFB135Q30KP9 77 aa11.02□□□□□ -0.64
TUBB3-209ENST00000555609 ATP5EP2Q5VTU8 51 aa11.02□□□□□ -0.64
TUBB3-209ENST00000555609 Q8NAQ8 132 aa11.02□□□□□ -0.65
TUBB3-209ENST00000555609 GVQW2A0A096LPI5 108 aaPredicted RBP11.01□□□□□ -0.65
TUBB3-209ENST00000555609 RPL18AQ02543 176 aaKnown RBP11.01□□□□□ -0.65
TUBB3-209ENST00000555609 C9orf153Q5TBE3 101 aa11.01□□□□□ -0.65
TUBB3-209ENST00000555609 PRR34Q9NV39 138 aa11.01□□□□□ -0.65
TUBB3-209ENST00000555609 SPAG11BQ08648 103 aa11□□□□□ -0.65
TUBB3-209ENST00000555609 PRR3P79522 188 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms