RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 Q8IZM0 81 aa11.77□□□□□ -0.53
PSEN1-212ENST00000555254 TP73-AS1Q9UF72 201 aa11.77□□□□□ -0.53
PSEN1-212ENST00000555254 NBDYA0A0U1RRE5 68 aa11.76□□□□□ -0.53
PSEN1-212ENST00000555254 CIRBPQ14011 172 aaKnown RBP11.76□□□□□ -0.53
PSEN1-212ENST00000555254 Q6ZR54 194 aa11.76□□□□□ -0.53
PSEN1-212ENST00000555254 C2orf91Q6ZV80 131 aa11.76□□□□□ -0.53
PSEN1-212ENST00000555254 CXCL5P42830 114 aa11.75□□□□□ -0.53
PSEN1-212ENST00000555254 KRTAP26-1Q6PEX3 210 aa11.75□□□□□ -0.53
PSEN1-212ENST00000555254 A0A0J9YXY3 114 aa11.74□□□□□ -0.53
PSEN1-212ENST00000555254 LINC00587B1AMM8 73 aa11.74□□□□□ -0.53
PSEN1-212ENST00000555254 SPAG11BQ08648 103 aa11.74□□□□□ -0.53
PSEN1-212ENST00000555254 HSD52Q0P140 79 aa11.74□□□□□ -0.53
PSEN1-212ENST00000555254 SRSF9Q13242 221 aaKnown RBP eCLIP11.74□□□□□ -0.53
PSEN1-212ENST00000555254 M0R143 59 aa11.73□□□□□ -0.53
PSEN1-212ENST00000555254 MEIG1Q5JSS6 88 aa11.73□□□□□ -0.53
PSEN1-212ENST00000555254 C1orf134Q5TEV5 83 aa11.73□□□□□ -0.53
PSEN1-212ENST00000555254 HIST1H4GQ99525 98 aa11.73□□□□□ -0.53
PSEN1-212ENST00000555254 HECTD4Q9Y4D8 3996 aa11.73□□□□□ -0.53
PSEN1-212ENST00000555254 DNAH10Q8IVF4 4471 aa11.72□□□□□ -0.53
PSEN1-212ENST00000555254 TMEM238C9JI98 176 aa11.72□□□□□ -0.53
PSEN1-212ENST00000555254 ZNF561-AS1K7EIQ3 104 aa11.72□□□□□ -0.53
PSEN1-212ENST00000555254 TAL2Q16559 108 aa11.72□□□□□ -0.53
PSEN1-212ENST00000555254 ZNF625Q96I27 306 aaPredicted RBP11.72□□□□□ -0.53
PSEN1-212ENST00000555254 PSCAO43653 123 aa11.71□□□□□ -0.53
PSEN1-212ENST00000555254 TIMM17BO60830 172 aa11.71□□□□□ -0.53
PSEN1-212ENST00000555254 RTL8CO15255 209 aa11.7□□□□□ -0.54
PSEN1-212ENST00000555254 F8WDY8 70 aa11.69□□□□□ -0.54
PSEN1-212ENST00000555254 HINT1P49773 126 aaPredicted RBP11.69□□□□□ -0.54
PSEN1-212ENST00000555254 KIAA0087Q14695 138 aa11.69□□□□□ -0.54
PSEN1-212ENST00000555254 SPANXB1Q9NS25 103 aaPredicted RBP11.69□□□□□ -0.54
PSEN1-212ENST00000555254 BATFQ16520 125 aa11.68□□□□□ -0.54
PSEN1-212ENST00000555254 LINC00336Q6ZUF6 198 aa11.68□□□□□ -0.54
PSEN1-212ENST00000555254 C6orf223Q8N319 242 aa11.68□□□□□ -0.54
PSEN1-212ENST00000555254 KRTAP1-5Q9BYS1 174 aa11.68□□□□□ -0.54
PSEN1-212ENST00000555254 GCSHP23434 173 aa11.67□□□□□ -0.54
PSEN1-212ENST00000555254 HIGD2BQ4VC39 106 aa11.67□□□□□ -0.54
PSEN1-212ENST00000555254 Q6ZVH6 145 aa11.67□□□□□ -0.54
PSEN1-212ENST00000555254 COPS9Q8WXC6 57 aa11.67□□□□□ -0.54
PSEN1-212ENST00000555254 PTTG1IPP53801 180 aa11.66□□□□□ -0.54
PSEN1-212ENST00000555254 LINC00158P58513 81 aa11.66□□□□□ -0.54
PSEN1-212ENST00000555254 C2orf82Q6UX34 121 aa11.66□□□□□ -0.54
PSEN1-212ENST00000555254 NTN5Q8WTR8 489 aaPredicted RBP11.66□□□□□ -0.54
PSEN1-212ENST00000555254 C2orf48Q96LS8 159 aa11.66□□□□□ -0.54
PSEN1-212ENST00000555254 DNAH2Q9P225 4427 aa11.66□□□□□ -0.54
PSEN1-212ENST00000555254 GVQW2A0A096LPI5 108 aaPredicted RBP11.65□□□□□ -0.54
PSEN1-212ENST00000555254 USP17L23D6RBM5 183 aa11.65□□□□□ -0.54
PSEN1-212ENST00000555254 CEND1Q8N111 149 aa11.65□□□□□ -0.54
PSEN1-212ENST00000555254 C15orf56Q8N910 161 aa11.65□□□□□ -0.54
PSEN1-212ENST00000555254 CAMK2N2Q96S95 79 aa11.65□□□□□ -0.54
PSEN1-212ENST00000555254 SMIM13P0DJ93 91 aa11.64□□□□□ -0.55
PSEN1-212ENST00000555254 BVES-AS1Q5T3Y7 98 aa11.64□□□□□ -0.55
PSEN1-212ENST00000555254 SPANXDQ9BXN6 97 aa11.64□□□□□ -0.55
PSEN1-212ENST00000555254 SPANXCQ9NY87 97 aa11.64□□□□□ -0.55
PSEN1-212ENST00000555254 ERG28Q9UKR5 140 aa11.64□□□□□ -0.55
PSEN1-212ENST00000555254 A0A0U1RRA0 63 aa11.63□□□□□ -0.55
PSEN1-212ENST00000555254 IFITM1P13164 125 aa11.63□□□□□ -0.55
PSEN1-212ENST00000555254 C14orf177Q52M58 125 aa11.63□□□□□ -0.55
PSEN1-212ENST00000555254 UNQ6190/PRO20217Q6UXQ8 127 aa11.63□□□□□ -0.55
PSEN1-212ENST00000555254 LINC00526Q96FQ7 95 aa11.63□□□□□ -0.55
PSEN1-212ENST00000555254 ABCA13Q86UQ4 5058 aa11.63□□□□□ -0.55
PSEN1-212ENST00000555254 TMEM238LA0A1B0GVL6 79 aa11.62□□□□□ -0.55
PSEN1-212ENST00000555254 A6NJY4 79 aa11.62□□□□□ -0.55
PSEN1-212ENST00000555254 PFN2P35080 140 aa11.62□□□□□ -0.55
PSEN1-212ENST00000555254 COX17Q14061 63 aa11.62□□□□□ -0.55
PSEN1-212ENST00000555254 A6NDN8 102 aa11.61□□□□□ -0.55
PSEN1-212ENST00000555254 RPL24P83731 157 aaKnown RBP11.61□□□□□ -0.55
PSEN1-212ENST00000555254 ADAMTSL4-AS1Q5T5F5 129 aa11.61□□□□□ -0.55
PSEN1-212ENST00000555254 LITAFQ99732 161 aa11.61□□□□□ -0.55
PSEN1-212ENST00000555254 SNHG12Q9BXW3 62 aa11.61□□□□□ -0.55
PSEN1-212ENST00000555254 DNAH17Q9UFH2 4485 aa11.6□□□□□ -0.55
PSEN1-212ENST00000555254 TRBV30A0A0K0K1B3 111 aa11.6□□□□□ -0.55
PSEN1-212ENST00000555254 SYCNQ0VAF6 134 aa11.6□□□□□ -0.55
PSEN1-212ENST00000555254 MUSTN1Q8IVN3 82 aa11.6□□□□□ -0.55
PSEN1-212ENST00000555254 LECT2O14960 151 aa11.59□□□□□ -0.55
PSEN1-212ENST00000555254 TNP2Q05952 138 aa11.59□□□□□ -0.55
PSEN1-212ENST00000555254 C10orf25Q5T742 122 aa11.58□□□□□ -0.56
PSEN1-212ENST00000555254 MIR7-3HGQ8N6C7 128 aa11.58□□□□□ -0.56
PSEN1-212ENST00000555254 EREGO14944 169 aa11.57□□□□□ -0.56
PSEN1-212ENST00000555254 COL5A1-AS1Q5SY13 56 aa11.57□□□□□ -0.56
PSEN1-212ENST00000555254 DAND5Q8N907 189 aa11.57□□□□□ -0.56
PSEN1-212ENST00000555254 LINC00308Q8TCZ7 52 aa11.57□□□□□ -0.56
PSEN1-212ENST00000555254 FXYD2P54710 66 aa11.56□□□□□ -0.56
PSEN1-212ENST00000555254 NPC2P61916 151 aa11.56□□□□□ -0.56
PSEN1-212ENST00000555254 LBHQ53QV2 105 aaPredicted RBP11.56□□□□□ -0.56
PSEN1-212ENST00000555254 Q6ZRU5 148 aa11.56□□□□□ -0.56
PSEN1-212ENST00000555254 CARD19Q96LW7 228 aa11.56□□□□□ -0.56
PSEN1-212ENST00000555254 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.55□□□□□ -0.56
PSEN1-212ENST00000555254 A0A1B0GVY2 172 aa11.55□□□□□ -0.56
PSEN1-212ENST00000555254 RNF151Q2KHN1 245 aa11.55□□□□□ -0.56
PSEN1-212ENST00000555254 C9orf116Q5BN46 136 aaPredicted RBP11.55□□□□□ -0.56
PSEN1-212ENST00000555254 C6orf48Q9UBA6 75 aa11.55□□□□□ -0.56
PSEN1-212ENST00000555254 FAT2Q9NYQ8 4349 aa11.54□□□□□ -0.56
PSEN1-212ENST00000555254 NHP2Q9NX24 153 aaKnown RBP11.54□□□□□ -0.56
PSEN1-212ENST00000555254 PPDPFQ9H3Y8 114 aa11.53□□□□□ -0.56
PSEN1-212ENST00000555254 A4D1N5 150 aa11.52□□□□□ -0.57
PSEN1-212ENST00000555254 Q6ZRN7 208 aaPredicted RBP11.52□□□□□ -0.57
PSEN1-212ENST00000555254 RAB37Q96AX2 223 aa11.51□□□□□ -0.57
PSEN1-212ENST00000555254 NDUFC2-KCTD14E9PQ53 114 aa11.49□□□□□ -0.57
PSEN1-212ENST00000555254 WFDC2Q14508 124 aa11.49□□□□□ -0.57
PSEN1-212ENST00000555254 SND1-IT1Q9HBX3 110 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms