RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 HIST1H2BNQ99877 126 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 HIST1H2BMQ99879 126 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 OTORQ9NRC9 128 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 ZFP30Q9Y2G7 519 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 HLA-DRB4X5D2U9 266 aa1.89□□□□□ -2.11
CKS1BP1-201ENST00000555221 COL7A1Q02388 2944 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 TRBV19A0A075B6N1 114 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 CTXND1A0A1B0GTU2 59 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 K7EP13 123 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 ARPC5O15511 151 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 C1QBP02746 253 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 RANP62826 216 aaKnown RBP1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 UBE2L3P68036 154 aaKnown RBP1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 DEFA5Q01523 94 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 HIST1H1AQ02539 215 aaPredicted RBP1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 ELOBQ15370 118 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 MIC13Q5XKP0 118 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 TCTE3Q8IZS6 198 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 KCNRGQ8N5I3 272 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 C5orf17Q8NAS9 161 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 MGST2Q99735 147 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 DERL1Q9BUN8 251 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 C11orf68Q9H3H3 251 aaKnown RBP1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 OR5AC2Q9NZP5 309 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 TIMM8BQ9Y5J9 83 aaPredicted RBP1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 FSIP2Q5CZC0 6907 aa1.88□□□□□ -2.11
CKS1BP1-201ENST00000555221 STAB2Q8WWQ8 2551 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 CMYA5Q8N3K9 4069 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 TRAV10A0A0B4J240 114 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 TRAV1-1A0A0B4J248 108 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 TRAV21A0A0B4J279 112 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 PDE6DO43924 150 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 CRPP02741 224 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 OR10J4P0C629 311 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 IGLC2P0DOY2 106 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 ZNF80P51504 273 aaPredicted RBP1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 UBE2G1P62253 170 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 RPL19P84098 196 aaKnown RBP1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 DEFB135Q30KP9 77 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 PATE2Q6UY27 113 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 C15orf53Q8NAA6 179 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 SFT2D1Q8WV19 159 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 LINC00467Q9BRT7 94 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 SMIM3Q9BZL3 60 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 MANBALQ9NQG1 85 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 MRPL36Q9P0J6 103 aaKnown RBP1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 EPDR1Q9UM22 224 aa1.87□□□□□ -2.11
CKS1BP1-201ENST00000555221 TRBV6-5A0A0K0K1A5 114 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 TRBV6-1A0A0K0K1D8 114 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 C7orf71A4D174 169 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 MAP1LC3B2A6NCE7 125 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 A8MTW9 85 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 H3BNG1 76 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 H3BQ15 152 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 ARL14EPLP0DKL9 152 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 HTN1P15515 57 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 S100A4P26447 101 aaKnown RBP1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 GCHFRP30047 84 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 RNASE4P34096 147 aaKnown RBP1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 ATP5G3P48201 142 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 CCL18P55774 89 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 RPS20P60866 119 aaKnown RBP1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 Q1T7F1 81 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 RPL7L1Q6DKI1 246 aaKnown RBP1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 FP248Q71RG6 208 aaPredicted RBP1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 SMIM15Q7Z3B0 74 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 ANKRD29Q8N6D5 301 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 TMEM263Q8WUH6 116 aaKnown RBP1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 FAM167A-AS1Q96KT0 104 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 MAP1LC3BQ9GZQ8 125 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 CYSTM1Q9H1C7 97 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 PKIGQ9Y2B9 76 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 RNF213Q63HN8 5207 aa1.86□□□□□ -2.11
CKS1BP1-201ENST00000555221 DEFB131BA0A096LNP1 70 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 TRAV5A0A0B4J249 113 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 TRAV12-3A0A0B4J271 114 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 A8MWV9 139 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 IBA57-AS1B1ANH7 110 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 F2Z2F3 143 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 M0R2P5 195 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 TCRAP04437 139 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 PKIAP61925 76 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 PEA15Q15121 130 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 SPINK13Q1W4C9 94 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 TDRG1Q3Y452 100 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 TMEM97Q5BJF2 176 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 Q6AWC8 147 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 TEX261Q6UWH6 196 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 MIR17HGQ75NE6 70 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 BAGE2Q86Y30 109 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 FAM213BQ8TBF2 198 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 BORCS7Q96B45 105 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 PRADC1Q9BSG0 188 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 AGPAT4-IT1Q9H0P7 198 aa1.85□□□□□ -2.11
CKS1BP1-201ENST00000555221 A0A087WWC5 75 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 M0R2Z0 102 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 PPP1R17O96001 155 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 S100A8P05109 93 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 CXCL1P09341 107 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms