RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 LINC01561Q8N1V8 128 aa7.79□□□□□ -1.16
SYNE2-214ENST00000554928 FAM19A2Q8N3H0 131 aa7.79□□□□□ -1.16
SYNE2-214ENST00000554928 LINC00469Q8N7U9 141 aa7.79□□□□□ -1.16
SYNE2-214ENST00000554928 GEMIN7Q9H840 131 aaKnown RBP7.79□□□□□ -1.16
SYNE2-214ENST00000554928 PLAC8Q9NZF1 115 aa7.79□□□□□ -1.16
SYNE2-214ENST00000554928 FAT3Q8TDW7 4589 aa7.78□□□□□ -1.16
SYNE2-214ENST00000554928 IGLV5-45A0A087WSX0 123 aa7.78□□□□□ -1.16
SYNE2-214ENST00000554928 LINC01549A6NIU2 74 aa7.78□□□□□ -1.16
SYNE2-214ENST00000554928 SMIM1B2RUZ4 78 aa7.78□□□□□ -1.16
SYNE2-214ENST00000554928 NDUFA1O15239 70 aa7.78□□□□□ -1.16
SYNE2-214ENST00000554928 PTTG1IPP53801 180 aa7.78□□□□□ -1.16
SYNE2-214ENST00000554928 NDUFA6P56556 154 aa7.78□□□□□ -1.16
SYNE2-214ENST00000554928 C9orf116Q5BN46 136 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-214ENST00000554928 STPG4Q8N801 248 aa7.78□□□□□ -1.16
SYNE2-214ENST00000554928 CHCHD1Q96BP2 118 aaKnown RBP7.78□□□□□ -1.16
SYNE2-214ENST00000554928 MRPL35Q9NZE8 188 aaKnown RBP7.78□□□□□ -1.16
SYNE2-214ENST00000554928 TOMM7Q9P0U1 55 aa7.78□□□□□ -1.16
SYNE2-214ENST00000554928 LOC107984640A0A0U1RRK4 108 aa7.77□□□□□ -1.17
SYNE2-214ENST00000554928 A0A1W2PNN7 141 aa7.77□□□□□ -1.17
SYNE2-214ENST00000554928 SERF1AO75920 110 aa7.77□□□□□ -1.17
SYNE2-214ENST00000554928 SPINK8P0C7L1 97 aa7.77□□□□□ -1.17
SYNE2-214ENST00000554928 HNRNPA3P51991 378 aaKnown RBP7.77□□□□□ -1.17
SYNE2-214ENST00000554928 RPL18AQ02543 176 aaKnown RBP7.77□□□□□ -1.17
SYNE2-214ENST00000554928 BAGE3Q86Y29 109 aa7.77□□□□□ -1.17
SYNE2-214ENST00000554928 KRTAP4-12Q9BQ66 201 aa7.77□□□□□ -1.17
SYNE2-214ENST00000554928 LRP1Q07954 4544 aaKnown RBP7.77□□□□□ -1.17
SYNE2-214ENST00000554928 IGLC3P0DOY3 106 aa7.76□□□□□ -1.17
SYNE2-214ENST00000554928 SEC11AP67812 179 aa7.76□□□□□ -1.17
SYNE2-214ENST00000554928 RNF151Q2KHN1 245 aa7.76□□□□□ -1.17
SYNE2-214ENST00000554928 Q6ZRP5 223 aa7.76□□□□□ -1.17
SYNE2-214ENST00000554928 FLG2Q5D862 2391 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-214ENST00000554928 C11orf86A6NJI1 115 aa7.75□□□□□ -1.17
SYNE2-214ENST00000554928 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
SYNE2-214ENST00000554928 ZNF22P17026 224 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-214ENST00000554928 RPL37AP61513 92 aaKnown RBP7.75□□□□□ -1.17
SYNE2-214ENST00000554928 Q8IZM0 81 aa7.75□□□□□ -1.17
SYNE2-214ENST00000554928 PACRGQ96M98 296 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-214ENST00000554928 FAM168BA1KXE4 195 aa7.74□□□□□ -1.17
SYNE2-214ENST00000554928 F8WDY8 70 aa7.74□□□□□ -1.17
SYNE2-214ENST00000554928 HSBP1O75506 76 aa7.74□□□□□ -1.17
SYNE2-214ENST00000554928 ATP5LO75964 103 aa7.74□□□□□ -1.17
SYNE2-214ENST00000554928 IFI27L1Q96BM0 104 aa7.74□□□□□ -1.17
SYNE2-214ENST00000554928 PRSS2P07478 247 aa7.73□□□□□ -1.17
SYNE2-214ENST00000554928 TLX1NBP0CAT3 122 aa7.73□□□□□ -1.17
SYNE2-214ENST00000554928 GAGE2EQ4V326 116 aa7.73□□□□□ -1.17
SYNE2-214ENST00000554928 C6orf226Q5I0X4 101 aa7.73□□□□□ -1.17
SYNE2-214ENST00000554928 KRTAP7-1Q8IUC3 87 aa7.73□□□□□ -1.17
SYNE2-214ENST00000554928 GAGE2DQ9UEU5 116 aa7.73□□□□□ -1.17
SYNE2-214ENST00000554928 HERC1Q15751 4861 aa7.72□□□□□ -1.17
SYNE2-214ENST00000554928 TRBV30A0A0K0K1B3 111 aa7.72□□□□□ -1.17
SYNE2-214ENST00000554928 COX7B2Q8TF08 81 aa7.72□□□□□ -1.17
SYNE2-214ENST00000554928 LINC00474Q9P2X8 69 aa7.72□□□□□ -1.17
SYNE2-214ENST00000554928 TMA7Q9Y2S6 64 aaKnown RBP7.72□□□□□ -1.17
SYNE2-214ENST00000554928 HIST1H2BKO60814 126 aa7.71□□□□□ -1.18
SYNE2-214ENST00000554928 HIST1H2BJP06899 126 aa7.71□□□□□ -1.18
SYNE2-214ENST00000554928 HIST1H2BOP23527 126 aa7.71□□□□□ -1.18
SYNE2-214ENST00000554928 HIST1H2BBP33778 126 aa7.71□□□□□ -1.18
SYNE2-214ENST00000554928 HIST1H2BDP58876 126 aa7.71□□□□□ -1.18
SYNE2-214ENST00000554928 CKS1BP61024 79 aa7.71□□□□□ -1.18
SYNE2-214ENST00000554928 HIST1H2BCP62807 126 aa7.71□□□□□ -1.18
SYNE2-214ENST00000554928 HIST2H2BEQ16778 126 aa7.71□□□□□ -1.18
SYNE2-214ENST00000554928 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-214ENST00000554928 LCE3BQ5TA77 95 aa7.71□□□□□ -1.18
SYNE2-214ENST00000554928 HIST1H2BHQ93079 126 aa7.71□□□□□ -1.18
SYNE2-214ENST00000554928 HIST1H2BNQ99877 126 aa7.71□□□□□ -1.18
SYNE2-214ENST00000554928 HIST1H2BMQ99879 126 aa7.71□□□□□ -1.18
SYNE2-214ENST00000554928 PKIGQ9Y2B9 76 aa7.71□□□□□ -1.18
SYNE2-214ENST00000554928 CHTOPQ9Y3Y2 248 aaKnown RBP7.71□□□□□ -1.18
SYNE2-214ENST00000554928 IGLV5-39A0A0G2JS06 123 aa7.7□□□□□ -1.18
SYNE2-214ENST00000554928 C9orf129Q5T035 196 aaKnown RBP7.7□□□□□ -1.18
SYNE2-214ENST00000554928 PHF5AQ7RTV0 110 aaKnown RBP7.7□□□□□ -1.18
SYNE2-214ENST00000554928 TRAV12-1A0A0B4J245 112 aa7.69□□□□□ -1.18
SYNE2-214ENST00000554928 NDUFC2-KCTD14E9PQ53 114 aa7.69□□□□□ -1.18
SYNE2-214ENST00000554928 F8VRH5 84 aa7.69□□□□□ -1.18
SYNE2-214ENST00000554928 H0Y8G0 127 aa7.69□□□□□ -1.18
SYNE2-214ENST00000554928 H3BRM9 83 aa7.69□□□□□ -1.18
SYNE2-214ENST00000554928 FABP4P15090 132 aa7.69□□□□□ -1.18
SYNE2-214ENST00000554928 KRTAP11-1Q8IUC1 163 aa7.69□□□□□ -1.18
SYNE2-214ENST00000554928 LEPROTL1O95214 131 aa7.68□□□□□ -1.18
SYNE2-214ENST00000554928 ODF1Q14990 250 aa7.68□□□□□ -1.18
SYNE2-214ENST00000554928 TMEM170BQ5T4T1 132 aa7.68□□□□□ -1.18
SYNE2-214ENST00000554928 FAM19A5Q7Z5A7 132 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-214ENST00000554928 XAGE1AQ9HD64 81 aa7.68□□□□□ -1.18
SYNE2-214ENST00000554928 PRR3P79522 188 aaKnown RBP7.67□□□□□ -1.18
SYNE2-214ENST00000554928 C7orf33Q8WU49 177 aa7.67□□□□□ -1.18
SYNE2-214ENST00000554928 TMEM223A0PJW6 202 aa7.66□□□□□ -1.18
SYNE2-214ENST00000554928 CXCL5P42830 114 aa7.66□□□□□ -1.18
SYNE2-214ENST00000554928 SERTAD4-AS1Q5TG53 156 aa7.66□□□□□ -1.18
SYNE2-214ENST00000554928 PMCHL2Q9BQD1 86 aa7.66□□□□□ -1.18
SYNE2-214ENST00000554928 ZNF625Q96I27 306 aaPredicted RBP7.64□□□□□ -1.19
SYNE2-214ENST00000554928 KRTAP19-1Q8IUB9 90 aa7.63□□□□□ -1.19
SYNE2-214ENST00000554928 PSORS1C2Q9UIG4 136 aa7.63□□□□□ -1.19
SYNE2-214ENST00000554928 HSPB8Q9UJY1 196 aa7.63□□□□□ -1.19
SYNE2-214ENST00000554928 M0QXV9 152 aa7.62□□□□□ -1.19
SYNE2-214ENST00000554928 PFN2P35080 140 aa7.62□□□□□ -1.19
SYNE2-214ENST00000554928 TSPEAR-AS2P59090 65 aa7.61□□□□□ -1.19
SYNE2-214ENST00000554928 EIF4EBP3O60516 100 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-214ENST00000554928 COA6Q5JTJ3 125 aaKnown RBP7.6□□□□□ -1.19
SYNE2-214ENST00000554928 ERG28Q9UKR5 140 aa7.6□□□□□ -1.19
SYNE2-214ENST00000554928 LOC105371267A0A1B0GV96 52 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 949.8 ms