RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 PKIAP61925 76 aa3.87□□□□□ -1.79
ATXN3-230ENST00000554673 KIAA0087Q14695 138 aa3.87□□□□□ -1.79
ATXN3-230ENST00000554673 MRPL23Q16540 153 aaKnown RBP3.87□□□□□ -1.79
ATXN3-230ENST00000554673 ADAMTSL4-AS1Q5T5F5 129 aa3.87□□□□□ -1.79
ATXN3-230ENST00000554673 Q6ZVH6 145 aa3.87□□□□□ -1.79
ATXN3-230ENST00000554673 LINC01561Q8N1V8 128 aa3.87□□□□□ -1.79
ATXN3-230ENST00000554673 VAMP8Q9BV40 100 aa3.87□□□□□ -1.79
ATXN3-230ENST00000554673 SNHG12Q9BXW3 62 aa3.87□□□□□ -1.79
ATXN3-230ENST00000554673 COX11Q9Y6N1 276 aa3.87□□□□□ -1.79
ATXN3-230ENST00000554673 ICOSQ9Y6W8 199 aa3.87□□□□□ -1.79
ATXN3-230ENST00000554673 FRAS1Q86XX4 4008 aa3.87□□□□□ -1.79
ATXN3-230ENST00000554673 TRBV25-1A0A075B6N4 114 aa3.86□□□□□ -1.79
ATXN3-230ENST00000554673 TRAV13-1A0A0B4J241 112 aa3.86□□□□□ -1.79
ATXN3-230ENST00000554673 TINCRA0A1B0GVN0 87 aa3.86□□□□□ -1.79
ATXN3-230ENST00000554673 E9PLD3 99 aa3.86□□□□□ -1.79
ATXN3-230ENST00000554673 IGHV3-30P01768 117 aa3.86□□□□□ -1.79
ATXN3-230ENST00000554673 IGHV3-33P01772 117 aa3.86□□□□□ -1.79
ATXN3-230ENST00000554673 IGHV3-30-3P0DP02 117 aa3.86□□□□□ -1.79
ATXN3-230ENST00000554673 IGHV3-30-5P0DP03 117 aa3.86□□□□□ -1.79
ATXN3-230ENST00000554673 DDTP30046 118 aa3.86□□□□□ -1.79
ATXN3-230ENST00000554673 SOSTDC1Q6X4U4 206 aa3.86□□□□□ -1.79
ATXN3-230ENST00000554673 LINC00269Q8N2A0 174 aa3.86□□□□□ -1.79
ATXN3-230ENST00000554673 OR5A1Q8NGJ0 315 aa3.86□□□□□ -1.79
ATXN3-230ENST00000554673 TMEM101Q96IK0 257 aa3.86□□□□□ -1.79
ATXN3-230ENST00000554673 CHCHD5Q9BSY4 110 aa3.86□□□□□ -1.79
ATXN3-230ENST00000554673 IGLV10-54A0A075B6I4 117 aa3.85□□□□□ -1.79
ATXN3-230ENST00000554673 IGKV3OR2-268A0A0C4DH90 116 aa3.85□□□□□ -1.79
ATXN3-230ENST00000554673 H7C423 109 aa3.85□□□□□ -1.79
ATXN3-230ENST00000554673 DNAH10OSP0CZ25 163 aa3.85□□□□□ -1.79
ATXN3-230ENST00000554673 RPL13AP40429 203 aaKnown RBP3.85□□□□□ -1.79
ATXN3-230ENST00000554673 XGP55808 180 aa3.85□□□□□ -1.79
ATXN3-230ENST00000554673 Q6ZN92 141 aa3.85□□□□□ -1.79
ATXN3-230ENST00000554673 Q6ZRN7 208 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-230ENST00000554673 C15orf56Q8N910 161 aa3.85□□□□□ -1.79
ATXN3-230ENST00000554673 LINC00526Q96FQ7 95 aa3.85□□□□□ -1.79
ATXN3-230ENST00000554673 ZNF625Q96I27 306 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-230ENST00000554673 MIEN1Q9BRT3 115 aa3.85□□□□□ -1.79
ATXN3-230ENST00000554673 KLK12Q9UKR0 248 aa3.85□□□□□ -1.79
ATXN3-230ENST00000554673 MRPS16Q9Y3D3 137 aaKnown RBP3.85□□□□□ -1.79
ATXN3-230ENST00000554673 TEX48A0A1B0GUV7 120 aa3.84□□□□□ -1.79
ATXN3-230ENST00000554673 IGLL5B9A064 214 aa3.84□□□□□ -1.79
ATXN3-230ENST00000554673 CCL25O15444 150 aa3.84□□□□□ -1.79
ATXN3-230ENST00000554673 DLEU1O43261 78 aa3.84□□□□□ -1.79
ATXN3-230ENST00000554673 CTAG1AP78358 180 aa3.84□□□□□ -1.79
ATXN3-230ENST00000554673 ZFAND6Q6FIF0 208 aa3.84□□□□□ -1.79
ATXN3-230ENST00000554673 C5orf38Q86SI9 138 aa3.84□□□□□ -1.79
ATXN3-230ENST00000554673 C6orf223Q8N319 242 aa3.84□□□□□ -1.79
ATXN3-230ENST00000554673 FAT2Q9NYQ8 4349 aa3.83□□□□□ -1.8
ATXN3-230ENST00000554673 LEPROTO15243 131 aa3.83□□□□□ -1.8
ATXN3-230ENST00000554673 ZNF25P17030 456 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-230ENST00000554673 NMUP48645 174 aa3.83□□□□□ -1.8
ATXN3-230ENST00000554673 FXYD2P54710 66 aa3.83□□□□□ -1.8
ATXN3-230ENST00000554673 REG3AQ06141 175 aa3.83□□□□□ -1.8
ATXN3-230ENST00000554673 LINC01556Q5JQF7 62 aa3.83□□□□□ -1.8
ATXN3-230ENST00000554673 C2orf82Q6UX34 121 aa3.83□□□□□ -1.8
ATXN3-230ENST00000554673 CHCHD10Q8WYQ3 142 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-230ENST00000554673 UPK3BQ9BT76 320 aa3.83□□□□□ -1.8
ATXN3-230ENST00000554673 TRAV8-6A0A0B4J262 113 aa3.82□□□□□ -1.8
ATXN3-230ENST00000554673 IGHV1-58A0A0C4DH39 117 aa3.82□□□□□ -1.8
ATXN3-230ENST00000554673 PLNP26678 52 aa3.82□□□□□ -1.8
ATXN3-230ENST00000554673 XCL1P47992 114 aa3.82□□□□□ -1.8
ATXN3-230ENST00000554673 BVES-AS1Q5T3Y7 98 aa3.82□□□□□ -1.8
ATXN3-230ENST00000554673 TMEM170BQ5T4T1 132 aa3.82□□□□□ -1.8
ATXN3-230ENST00000554673 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-230ENST00000554673 KRTAP7-1Q8IUC3 87 aa3.82□□□□□ -1.8
ATXN3-230ENST00000554673 LINC00469Q8N7U9 141 aa3.82□□□□□ -1.8
ATXN3-230ENST00000554673 PKD1P98161 4303 aa3.82□□□□□ -1.8
ATXN3-230ENST00000554673 A0A0J9YXY3 114 aa3.81□□□□□ -1.8
ATXN3-230ENST00000554673 C20orf202A1L168 122 aa3.81□□□□□ -1.8
ATXN3-230ENST00000554673 J3QQQ9 107 aa3.81□□□□□ -1.8
ATXN3-230ENST00000554673 ANGP03950 147 aaKnown RBP3.81□□□□□ -1.8
ATXN3-230ENST00000554673 FUSP35637 526 aaKnown RBP eCLIP3.81□□□□□ -1.8
ATXN3-230ENST00000554673 C9orf116Q5BN46 136 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-230ENST00000554673 Q6ZR54 194 aa3.81□□□□□ -1.8
ATXN3-230ENST00000554673 DAND5Q8N907 189 aa3.81□□□□□ -1.8
ATXN3-230ENST00000554673 UQCR10Q9UDW1 63 aa3.81□□□□□ -1.8
ATXN3-230ENST00000554673 MYMXA0A1B0GTQ4 84 aa3.8□□□□□ -1.8
ATXN3-230ENST00000554673 IBA57-AS1B1ANH7 110 aa3.8□□□□□ -1.8
ATXN3-230ENST00000554673 TMEM262E9PQX1 116 aa3.8□□□□□ -1.8
ATXN3-230ENST00000554673 K7ERJ3 54 aa3.8□□□□□ -1.8
ATXN3-230ENST00000554673 HINT1P49773 126 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-230ENST00000554673 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-230ENST00000554673 TMEM97Q5BJF2 176 aa3.8□□□□□ -1.8
ATXN3-230ENST00000554673 AMMECR1LQ6DCA0 310 aa3.8□□□□□ -1.8
ATXN3-230ENST00000554673 SLC25A34Q6PIV7 304 aa3.8□□□□□ -1.8
ATXN3-230ENST00000554673 C15orf53Q8NAA6 179 aa3.8□□□□□ -1.8
ATXN3-230ENST00000554673 UBE2WQ96B02 151 aa3.8□□□□□ -1.8
ATXN3-230ENST00000554673 KLK5Q9Y337 293 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-230ENST00000554673 DNAH5Q8TE73 4624 aa3.79□□□□□ -1.8
ATXN3-230ENST00000554673 LRCOL1A6NCL2 159 aa3.79□□□□□ -1.8
ATXN3-230ENST00000554673 LINC01549A6NIU2 74 aa3.79□□□□□ -1.8
ATXN3-230ENST00000554673 ZNF815PA8K554 130 aa3.79□□□□□ -1.8
ATXN3-230ENST00000554673 TAX1BP3O14907 124 aa3.79□□□□□ -1.8
ATXN3-230ENST00000554673 UBE2L6O14933 153 aa3.79□□□□□ -1.8
ATXN3-230ENST00000554673 NDUFA1O15239 70 aa3.79□□□□□ -1.8
ATXN3-230ENST00000554673 UNQ6190/PRO20217Q6UXQ8 127 aa3.79□□□□□ -1.8
ATXN3-230ENST00000554673 HIGD1BQ9P298 99 aa3.79□□□□□ -1.8
ATXN3-230ENST00000554673 HECTD4Q9Y4D8 3996 aa3.78□□□□□ -1.8
ATXN3-230ENST00000554673 DNAH8Q96JB1 4490 aa3.78□□□□□ -1.8
ATXN3-230ENST00000554673 SIVA1O15304 175 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms