RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 LOC389332A0A1B0GUA5 103 aa14.22□□□□□ -0.13
FOXA1-204ENST00000554607 NPSP0C0P6 89 aa14.22□□□□□ -0.13
FOXA1-204ENST00000554607 C2orf66Q6UXQ4 117 aa14.22□□□□□ -0.13
FOXA1-204ENST00000554607 LINC00173Q6ZV60 143 aa14.22□□□□□ -0.13
FOXA1-204ENST00000554607 F8VRH5 84 aa14.21□□□□□ -0.13
FOXA1-204ENST00000554607 ZC2HC1BQ5TFG8 222 aa14.21□□□□□ -0.13
FOXA1-204ENST00000554607 FAM19A3Q7Z5A8 133 aa14.21□□□□□ -0.13
FOXA1-204ENST00000554607 SEC11AP67812 179 aa14.2□□□□□ -0.14
FOXA1-204ENST00000554607 Q8N8P6 123 aa14.19□□□□□ -0.14
FOXA1-204ENST00000554607 HERVK_113P63121 156 aa14.18□□□□□ -0.14
FOXA1-204ENST00000554607 ORMDL2Q53FV1 153 aa14.18□□□□□ -0.14
FOXA1-204ENST00000554607 CXCL5P42830 114 aa14.17□□□□□ -0.14
FOXA1-204ENST00000554607 SRSF3P84103 164 aaKnown RBP14.17□□□□□ -0.14
FOXA1-204ENST00000554607 IGIPA6NJ69 53 aa14.16□□□□□ -0.14
FOXA1-204ENST00000554607 K7EMI3 77 aa14.16□□□□□ -0.14
FOXA1-204ENST00000554607 PAPPA-AS1Q5QFB9 102 aa14.16□□□□□ -0.14
FOXA1-204ENST00000554607 LINC00167Q96N53 147 aa14.16□□□□□ -0.14
FOXA1-204ENST00000554607 GEMIN7Q9H840 131 aaKnown RBP14.15□□□□□ -0.14
FOXA1-204ENST00000554607 CDKN2A-AS1Q9UH64 79 aa14.15□□□□□ -0.14
FOXA1-204ENST00000554607 hCG_2014768A0A024R1R8 64 aa14.14□□□□□ -0.15
FOXA1-204ENST00000554607 RPL37AP8A6NKH3 93 aa14.14□□□□□ -0.15
FOXA1-204ENST00000554607 G0S2P27469 103 aa14.12□□□□□ -0.15
FOXA1-204ENST00000554607 FAM229BQ4G0N7 80 aa14.12□□□□□ -0.15
FOXA1-204ENST00000554607 ANAPC11Q9NYG5 84 aa14.12□□□□□ -0.15
FOXA1-204ENST00000554607 UBE2AP49459 152 aa14.11□□□□□ -0.15
FOXA1-204ENST00000554607 LCE2DQ5TA82 110 aaPredicted RBP14.11□□□□□ -0.15
FOXA1-204ENST00000554607 CDIP1Q9H305 208 aa14.11□□□□□ -0.15
FOXA1-204ENST00000554607 KRTAP13-2Q52LG2 175 aa14.1□□□□□ -0.15
FOXA1-204ENST00000554607 LINC00304Q8N9R0 145 aa14.1□□□□□ -0.15
FOXA1-204ENST00000554607 RETNLBQ9BQ08 111 aa14.09□□□□□ -0.15
FOXA1-204ENST00000554607 GAGE10A6NGK3 116 aa14.08□□□□□ -0.16
FOXA1-204ENST00000554607 TPRXLQ17RH7 258 aa14.08□□□□□ -0.16
FOXA1-204ENST00000554607 KRTAP13-1Q8IUC0 172 aa14.08□□□□□ -0.16
FOXA1-204ENST00000554607 TIMM17AQ99595 171 aa14.08□□□□□ -0.16
FOXA1-204ENST00000554607 NXT2Q9NPJ8 142 aaKnown RBP14.08□□□□□ -0.16
FOXA1-204ENST00000554607 MUC17Q685J3 4493 aa14.07□□□□□ -0.16
FOXA1-204ENST00000554607 IGLV5-37A0A075B6J1 123 aa14.07□□□□□ -0.16
FOXA1-204ENST00000554607 KRTAP9-6A0A140TA67 174 aa14.07□□□□□ -0.16
FOXA1-204ENST00000554607 CTAG1AP78358 180 aa14.07□□□□□ -0.16
FOXA1-204ENST00000554607 PDZD11Q5EBL8 140 aa14.06□□□□□ -0.16
FOXA1-204ENST00000554607 NKAPP1Q8N9T2 125 aa14.06□□□□□ -0.16
FOXA1-204ENST00000554607 COX7B2Q8TF08 81 aa14.05□□□□□ -0.16
FOXA1-204ENST00000554607 IGLV7-46A0A075B6I9 117 aa14.04□□□□□ -0.16
FOXA1-204ENST00000554607 IGKV2D-26A0A0A0MRZ7 120 aa14.04□□□□□ -0.16
FOXA1-204ENST00000554607 SMIM1B2RUZ4 78 aa14.04□□□□□ -0.16
FOXA1-204ENST00000554607 PNRC1Q12796 327 aaPredicted RBP14.03□□□□□ -0.16
FOXA1-204ENST00000554607 TOMM6Q96B49 74 aa14.03□□□□□ -0.16
FOXA1-204ENST00000554607 ANAPC16Q96DE5 110 aa14.01□□□□□ -0.17
FOXA1-204ENST00000554607 TINCRA0A1B0GVN0 87 aa14□□□□□ -0.17
FOXA1-204ENST00000554607 RAB5BP61020 215 aa14□□□□□ -0.17
FOXA1-204ENST00000554607 ERASQ7Z444 233 aa14□□□□□ -0.17
FOXA1-204ENST00000554607 MT-ND4LP03901 98 aa13.99□□□□□ -0.17
FOXA1-204ENST00000554607 SCGB3A1Q96QR1 104 aa13.98□□□□□ -0.17
FOXA1-204ENST00000554607 IGKV2-28A0A075B6P5 120 aa13.97□□□□□ -0.17
FOXA1-204ENST00000554607 IGLV5-45A0A087WSX0 123 aa13.97□□□□□ -0.17
FOXA1-204ENST00000554607 IGKV2D-28P01615 120 aa13.97□□□□□ -0.17
FOXA1-204ENST00000554607 LINC01549A6NIU2 74 aa13.94□□□□□ -0.18
FOXA1-204ENST00000554607 ATP5LO75964 103 aa13.94□□□□□ -0.18
FOXA1-204ENST00000554607 FAM19A1Q7Z5A9 133 aa13.93□□□□□ -0.18
FOXA1-204ENST00000554607 PPDPFQ9H3Y8 114 aa13.93□□□□□ -0.18
FOXA1-204ENST00000554607 SPINK8P0C7L1 97 aa13.92□□□□□ -0.18
FOXA1-204ENST00000554607 PRLHP81277 87 aa13.92□□□□□ -0.18
FOXA1-204ENST00000554607 MRPL18Q9H0U6 180 aaKnown RBP13.92□□□□□ -0.18
FOXA1-204ENST00000554607 SCO1O75880 301 aa13.91□□□□□ -0.18
FOXA1-204ENST00000554607 ADCYAP1P18509 176 aa13.91□□□□□ -0.18
FOXA1-204ENST00000554607 TMEM126AQ9H061 195 aa13.91□□□□□ -0.18
FOXA1-204ENST00000554607 CST9LQ9H4G1 147 aa13.91□□□□□ -0.18
FOXA1-204ENST00000554607 H3BRM9 83 aa13.89□□□□□ -0.19
FOXA1-204ENST00000554607 SPAG11AQ6PDA7 123 aa13.89□□□□□ -0.19
FOXA1-204ENST00000554607 PFN2P35080 140 aa13.88□□□□□ -0.19
FOXA1-204ENST00000554607 RPL24P83731 157 aaKnown RBP13.88□□□□□ -0.19
FOXA1-204ENST00000554607 PLEKHB2Q96CS7 222 aa13.88□□□□□ -0.19
FOXA1-204ENST00000554607 GNB1LQ9BYB4 327 aa13.88□□□□□ -0.19
FOXA1-204ENST00000554607 PMVKQ15126 192 aa13.87□□□□□ -0.19
FOXA1-204ENST00000554607 KIAA1644Q3SXP7 199 aa13.87□□□□□ -0.19
FOXA1-204ENST00000554607 TMEM238C9JI98 176 aa13.86□□□□□ -0.19
FOXA1-204ENST00000554607 VPREB1P12018 145 aa13.86□□□□□ -0.19
FOXA1-204ENST00000554607 CBLN2Q8IUK8 224 aa13.86□□□□□ -0.19
FOXA1-204ENST00000554607 C3orf22Q8N5N4 141 aa13.85□□□□□ -0.19
FOXA1-204ENST00000554607 M0R378 163 aa13.84□□□□□ -0.19
FOXA1-204ENST00000554607 FP248Q71RG6 208 aaPredicted RBP13.84□□□□□ -0.19
FOXA1-204ENST00000554607 SND1-IT1Q9HBX3 110 aa13.83□□□□□ -0.2
FOXA1-204ENST00000554607 LINC01546A6NGU7 62 aa13.82□□□□□ -0.2
FOXA1-204ENST00000554607 COX17Q14061 63 aa13.82□□□□□ -0.2
FOXA1-204ENST00000554607 LINC00337Q8N6G1 96 aa13.82□□□□□ -0.2
FOXA1-204ENST00000554607 C4orf48Q5BLP8 95 aa13.81□□□□□ -0.2
FOXA1-204ENST00000554607 ERG28Q9UKR5 140 aa13.81□□□□□ -0.2
FOXA1-204ENST00000554607 IGLV5-39A0A0G2JS06 123 aa13.79□□□□□ -0.2
FOXA1-204ENST00000554607 RAB14P61106 215 aa13.79□□□□□ -0.2
FOXA1-204ENST00000554607 HIGD2AQ9BW72 106 aa13.79□□□□□ -0.2
FOXA1-204ENST00000554607 TRAV9-1A0A075B6T8 112 aa13.76□□□□□ -0.21
FOXA1-204ENST00000554607 IGLC3P0DOY3 106 aa13.76□□□□□ -0.21
FOXA1-204ENST00000554607 SPRR4Q96PI1 79 aa13.76□□□□□ -0.21
FOXA1-204ENST00000554607 A0A1B0GVG6 124 aa13.75□□□□□ -0.21
FOXA1-204ENST00000554607 LINC01547P58512 204 aaPredicted RBP13.75□□□□□ -0.21
FOXA1-204ENST00000554607 ZNF706Q9Y5V0 76 aaPredicted RBP13.75□□□□□ -0.21
FOXA1-204ENST00000554607 ASB16-AS1Q495Z4 193 aa13.74□□□□□ -0.21
FOXA1-204ENST00000554607 SFTA2Q6UW10 78 aa13.74□□□□□ -0.21
FOXA1-204ENST00000554607 FA2HQ7L5A8 372 aa13.74□□□□□ -0.21
FOXA1-204ENST00000554607 SMCO4Q9NRQ5 59 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms