RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 GDF5OSQ5U4N7 250 aa1.9□□□□□ -2.11
PRPF39-206ENST00000554429 C10orf99Q6UWK7 81 aa1.9□□□□□ -2.11
PRPF39-206ENST00000554429 ZFP2Q6ZN57 461 aa1.9□□□□□ -2.11
PRPF39-206ENST00000554429 ZNF497Q6ZNH5 498 aa1.9□□□□□ -2.11
PRPF39-206ENST00000554429 NOTCH2NLQ7Z3S9 236 aa1.9□□□□□ -2.11
PRPF39-206ENST00000554429 SLC25A29Q8N8R3 303 aa1.9□□□□□ -2.11
PRPF39-206ENST00000554429 KLHL30-AS1Q8NEE0 82 aa1.9□□□□□ -2.11
PRPF39-206ENST00000554429 IGKV1OR2-108A0A075B7D4 117 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 HIGD1CA8MV81 97 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 IGLV1-51P01701 117 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 APCSP02743 223 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 COX8AP10176 69 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 GCHFRP30047 84 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 PATE2Q6UY27 113 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 FAM223AQ8IWN6 122 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 SPTSSBQ8NFR3 76 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 STARD9Q9P2P6 4700 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 LINC01548A6NM66 108 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 A6NN06 94 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 IGHV3-23P01764 117 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 FCER1GP30273 86 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 SERF2P84101 59 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 RHOHQ15669 191 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 CHCHD1Q96BP2 118 aaKnown RBP1.89□□□□□ -2.11
PRPF39-206ENST00000554429 MRPL36Q9P0J6 103 aaKnown RBP1.89□□□□□ -2.11
PRPF39-206ENST00000554429 DNAH10Q8IVF4 4471 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 NBEAL2Q6ZNJ1 2754 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 IGHV3-49A0A0A0MS15 119 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 IGKV3D-20A0A0C4DH25 116 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 H3BVH4 76 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 LYPD5Q6UWN5 251 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 ZNF833PQ6ZTB9 187 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 C8orf49Q96NF6 230 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 NHP2Q9NX24 153 aaKnown RBP1.89□□□□□ -2.11
PRPF39-206ENST00000554429 DHRS4-AS1Q9P1J3 65 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 PHLDA3Q9Y5J5 127 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 V9GYV3 84 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 DNAH17Q9UFH2 4485 aa1.89□□□□□ -2.11
PRPF39-206ENST00000554429 HECTD4Q9Y4D8 3996 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 IGKV3-7A0A075B6H7 116 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 TRBV6-6A0A0A6YYG2 114 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 IGHV7-81A0A0B4J1V7 117 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 IGHV3-66A0A0C4DH42 116 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 PMS2P5A8MQ11 134 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 KLK15Q9H2R5 256 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 CSMD3Q7Z407 3707 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 IGHV1-24A0A0C4DH33 117 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 TMEM30CPA0ZSE6 113 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 A6NED7 52 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 M0R3E3 92 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 GAS8-AS1O95177 125 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 LCE1EQ5T753 118 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 Q6ZSN1 163 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 RETNLBQ9BQ08 111 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 LY96Q9Y6Y9 160 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 HYDINQ4G0P3 5121 aa1.88□□□□□ -2.11
PRPF39-206ENST00000554429 A0A0J9YXY3 114 aa1.87□□□□□ -2.11
PRPF39-206ENST00000554429 LEPROTL1O95214 131 aa1.87□□□□□ -2.11
PRPF39-206ENST00000554429 SAA2P0DJI9 122 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-206ENST00000554429 TSPEAR-AS2P59090 65 aa1.87□□□□□ -2.11
PRPF39-206ENST00000554429 ATP11AUNQ6ZP68 121 aa1.87□□□□□ -2.11
PRPF39-206ENST00000554429 AGRNO00468 2067 aa1.87□□□□□ -2.11
PRPF39-206ENST00000554429 FXYD2P54710 66 aa1.87□□□□□ -2.11
PRPF39-206ENST00000554429 LYZP61626 148 aa1.87□□□□□ -2.11
PRPF39-206ENST00000554429 HIST1H4AP62805 103 aaKnown RBP1.87□□□□□ -2.11
PRPF39-206ENST00000554429 FAM229BQ4G0N7 80 aa1.87□□□□□ -2.11
PRPF39-206ENST00000554429 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
PRPF39-206ENST00000554429 LINC00269Q8N2A0 174 aa1.87□□□□□ -2.11
PRPF39-206ENST00000554429 Q8TAT8 98 aa1.87□□□□□ -2.11
PRPF39-206ENST00000554429 LINC00476Q8WZB0 136 aa1.87□□□□□ -2.11
PRPF39-206ENST00000554429 USMG5Q96IX5 58 aa1.87□□□□□ -2.11
PRPF39-206ENST00000554429 CRCT1Q9UGL9 99 aa1.87□□□□□ -2.11
PRPF39-206ENST00000554429 NUPR2A6NF83 97 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 ARMS2P0C7Q2 107 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 IFI27P40305 119 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-206ENST00000554429 SLURP1P55000 103 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 ATP5EP56381 51 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-206ENST00000554429 DEFB1P60022 68 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 C15orf32Q32M92 178 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 ORMDL3Q8N138 153 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 PRSS3P2Q8NHM4 247 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 TRGV9Q99603 122 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 NDUFA12Q9UI09 145 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 STAB2Q8WWQ8 2551 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 VPS13DQ5THJ4 4388 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 IGLV5-37A0A075B6J1 123 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 IGHV4OR15-8A0A075B7B6 117 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 A0A087WW49 117 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 C2orf70A6NJV1 201 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 A8MU10 97 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 H7C2G1 150 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 PRSS1P07477 247 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 SAA1P0DJI8 122 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-206ENST00000554429 LUZP6Q538Z0 58 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 MUC4Q99102 2169 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 FAM223BA6NKX1 122 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 IBA57-AS1B1ANH7 110 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 H7BZZ5 65 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 CFC1BP0CG36 223 aa1.86□□□□□ -2.11
PRPF39-206ENST00000554429 LINC01547P58512 204 aaPredicted RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms