RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 VCX2Q9H322 139 aa6.48□□□□□ -1.37
PTCD2P1-201ENST00000554393 A0A1W2PNN7 141 aa6.47□□□□□ -1.37
PTCD2P1-201ENST00000554393 LINC01549A6NIU2 74 aa6.47□□□□□ -1.37
PTCD2P1-201ENST00000554393 MT1HL1P0DM35 61 aa6.47□□□□□ -1.37
PTCD2P1-201ENST00000554393 KIAA0087Q14695 138 aa6.47□□□□□ -1.37
PTCD2P1-201ENST00000554393 RHEBQ15382 184 aa6.47□□□□□ -1.37
PTCD2P1-201ENST00000554393 C9orf116Q5BN46 136 aaPredicted RBP6.47□□□□□ -1.37
PTCD2P1-201ENST00000554393 CARHSP1Q9Y2V2 147 aaKnown RBP6.47□□□□□ -1.37
PTCD2P1-201ENST00000554393 FAT4Q6V0I7 4981 aa6.46□□□□□ -1.38
PTCD2P1-201ENST00000554393 A0A0J9YXV3 536 aa6.46□□□□□ -1.38
PTCD2P1-201ENST00000554393 TRBV30A0A0K0K1B3 111 aa6.46□□□□□ -1.38
PTCD2P1-201ENST00000554393 LINC01546A6NGU7 62 aa6.46□□□□□ -1.38
PTCD2P1-201ENST00000554393 MT-ND6P03923 174 aa6.46□□□□□ -1.38
PTCD2P1-201ENST00000554393 SEC11AP67812 179 aa6.46□□□□□ -1.38
PTCD2P1-201ENST00000554393 KIAA1644Q3SXP7 199 aa6.46□□□□□ -1.38
PTCD2P1-201ENST00000554393 SPINK6Q6UWN8 80 aa6.46□□□□□ -1.38
PTCD2P1-201ENST00000554393 UNQ6190/PRO20217Q6UXQ8 127 aa6.46□□□□□ -1.38
PTCD2P1-201ENST00000554393 TOMM6Q96B49 74 aa6.46□□□□□ -1.38
PTCD2P1-201ENST00000554393 C6orf48Q9UBA6 75 aa6.46□□□□□ -1.38
PTCD2P1-201ENST00000554393 HERVK_113P63121 156 aa6.45□□□□□ -1.38
PTCD2P1-201ENST00000554393 C10orf25Q5T742 122 aa6.45□□□□□ -1.38
PTCD2P1-201ENST00000554393 ERASQ7Z444 233 aa6.45□□□□□ -1.38
PTCD2P1-201ENST00000554393 ALKBH7Q9BT30 221 aaPredicted RBP6.45□□□□□ -1.38
PTCD2P1-201ENST00000554393 MUC2Q02817 5179 aa6.44□□□□□ -1.38
PTCD2P1-201ENST00000554393 SRSF9Q13242 221 aaKnown RBP eCLIP6.44□□□□□ -1.38
PTCD2P1-201ENST00000554393 ZC2HC1BQ5TFG8 222 aa6.44□□□□□ -1.38
PTCD2P1-201ENST00000554393 LRP2P98164 4655 aa6.44□□□□□ -1.38
PTCD2P1-201ENST00000554393 NDUFC2-KCTD14E9PQ53 114 aa6.43□□□□□ -1.38
PTCD2P1-201ENST00000554393 PRSS2P07478 247 aa6.43□□□□□ -1.38
PTCD2P1-201ENST00000554393 REG3GQ6UW15 175 aa6.43□□□□□ -1.38
PTCD2P1-201ENST00000554393 Q8IZM0 81 aa6.43□□□□□ -1.38
PTCD2P1-201ENST00000554393 PACRGQ96M98 296 aaPredicted RBP6.43□□□□□ -1.38
PTCD2P1-201ENST00000554393 LINC01600Q96MT4 127 aa6.43□□□□□ -1.38
PTCD2P1-201ENST00000554393 C2orf82Q6UX34 121 aa6.42□□□□□ -1.38
PTCD2P1-201ENST00000554393 SCGB3A1Q96QR1 104 aa6.42□□□□□ -1.38
PTCD2P1-201ENST00000554393 GEMIN7Q9H840 131 aaKnown RBP6.42□□□□□ -1.38
PTCD2P1-201ENST00000554393 RPS10P5Q9NQ39 176 aa6.42□□□□□ -1.38
PTCD2P1-201ENST00000554393 PSORS1C2Q9UIG4 136 aa6.42□□□□□ -1.38
PTCD2P1-201ENST00000554393 TNXBP22105 4242 aa6.42□□□□□ -1.38
PTCD2P1-201ENST00000554393 CKS1BP61024 79 aa6.41□□□□□ -1.38
PTCD2P1-201ENST00000554393 C6orf226Q5I0X4 101 aa6.41□□□□□ -1.38
PTCD2P1-201ENST00000554393 PHF5AQ7RTV0 110 aaKnown RBP6.41□□□□□ -1.38
PTCD2P1-201ENST00000554393 KRTAP4-2Q9BYR5 136 aa6.41□□□□□ -1.38
PTCD2P1-201ENST00000554393 CDKN2A-AS1Q9UH64 79 aa6.41□□□□□ -1.38
PTCD2P1-201ENST00000554393 IGLV5-45A0A087WSX0 123 aa6.4□□□□□ -1.38
PTCD2P1-201ENST00000554393 TINCRA0A1B0GVN0 87 aa6.4□□□□□ -1.38
PTCD2P1-201ENST00000554393 CXCL5P42830 114 aa6.4□□□□□ -1.38
PTCD2P1-201ENST00000554393 FABP9Q0Z7S8 132 aa6.4□□□□□ -1.38
PTCD2P1-201ENST00000554393 ODF1Q14990 250 aa6.4□□□□□ -1.38
PTCD2P1-201ENST00000554393 GAGE2EQ4V326 116 aa6.4□□□□□ -1.38
PTCD2P1-201ENST00000554393 FA2HQ7L5A8 372 aa6.4□□□□□ -1.38
PTCD2P1-201ENST00000554393 SMCO4Q9NRQ5 59 aa6.4□□□□□ -1.38
PTCD2P1-201ENST00000554393 TOMM7Q9P0U1 55 aa6.4□□□□□ -1.38
PTCD2P1-201ENST00000554393 GAGE2DQ9UEU5 116 aa6.4□□□□□ -1.38
PTCD2P1-201ENST00000554393 FAM168BA1KXE4 195 aa6.39□□□□□ -1.39
PTCD2P1-201ENST00000554393 F8VRH5 84 aa6.39□□□□□ -1.39
PTCD2P1-201ENST00000554393 FAM19A5Q7Z5A7 132 aaPredicted RBP6.39□□□□□ -1.39
PTCD2P1-201ENST00000554393 SMIM1B2RUZ4 78 aa6.38□□□□□ -1.39
PTCD2P1-201ENST00000554393 M0QXV9 152 aa6.38□□□□□ -1.39
PTCD2P1-201ENST00000554393 PMVKQ15126 192 aa6.38□□□□□ -1.39
PTCD2P1-201ENST00000554393 NDUFA5Q16718 116 aa6.38□□□□□ -1.39
PTCD2P1-201ENST00000554393 PDZD11Q5EBL8 140 aa6.38□□□□□ -1.39
PTCD2P1-201ENST00000554393 C1orf137Q5JT78 98 aa6.38□□□□□ -1.39
PTCD2P1-201ENST00000554393 C9orf129Q5T035 196 aaKnown RBP6.38□□□□□ -1.39
PTCD2P1-201ENST00000554393 KRTAP7-1Q8IUC3 87 aa6.38□□□□□ -1.39
PTCD2P1-201ENST00000554393 SVBPQ8N300 66 aa6.38□□□□□ -1.39
PTCD2P1-201ENST00000554393 LINC00469Q8N7U9 141 aa6.38□□□□□ -1.39
PTCD2P1-201ENST00000554393 CST9LQ9H4G1 147 aa6.38□□□□□ -1.39
PTCD2P1-201ENST00000554393 SNAPINO95295 136 aa6.37□□□□□ -1.39
PTCD2P1-201ENST00000554393 APOC3P02656 99 aa6.37□□□□□ -1.39
PTCD2P1-201ENST00000554393 IGLV7-43P04211 117 aa6.37□□□□□ -1.39
PTCD2P1-201ENST00000554393 KRTAP10-8P60410 259 aa6.37□□□□□ -1.39
PTCD2P1-201ENST00000554393 TRAPPC1Q9Y5R8 145 aa6.37□□□□□ -1.39
PTCD2P1-201ENST00000554393 C18orf32Q8TCD1 76 aa6.36□□□□□ -1.39
PTCD2P1-201ENST00000554393 COX7B2Q8TF08 81 aa6.36□□□□□ -1.39
PTCD2P1-201ENST00000554393 A0A096LNJ9 63 aa6.35□□□□□ -1.39
PTCD2P1-201ENST00000554393 H3BRM9 83 aa6.35□□□□□ -1.39
PTCD2P1-201ENST00000554393 LINC00614P0C842 121 aa6.35□□□□□ -1.39
PTCD2P1-201ENST00000554393 UBE2BP63146 152 aa6.35□□□□□ -1.39
PTCD2P1-201ENST00000554393 KRTAP11-1Q8IUC1 163 aa6.35□□□□□ -1.39
PTCD2P1-201ENST00000554393 DIRC1Q969H9 104 aa6.35□□□□□ -1.39
PTCD2P1-201ENST00000554393 URB1-AS1Q96HZ7 61 aa6.35□□□□□ -1.39
PTCD2P1-201ENST00000554393 HBDP02042 147 aa6.34□□□□□ -1.39
PTCD2P1-201ENST00000554393 IGLC3P0DOY3 106 aa6.34□□□□□ -1.39
PTCD2P1-201ENST00000554393 RAB5BP61020 215 aa6.34□□□□□ -1.39
PTCD2P1-201ENST00000554393 TP73-AS1Q9UF72 201 aa6.34□□□□□ -1.39
PTCD2P1-201ENST00000554393 H0Y9J4 135 aa6.33□□□□□ -1.4
PTCD2P1-201ENST00000554393 LBHQ53QV2 105 aaPredicted RBP6.33□□□□□ -1.4
PTCD2P1-201ENST00000554393 IGLV5-39A0A0G2JS06 123 aa6.32□□□□□ -1.4
PTCD2P1-201ENST00000554393 ATP5LO75964 103 aa6.32□□□□□ -1.4
PTCD2P1-201ENST00000554393 SPINK8P0C7L1 97 aa6.32□□□□□ -1.4
PTCD2P1-201ENST00000554393 YPEL4Q96NS1 127 aa6.32□□□□□ -1.4
PTCD2P1-201ENST00000554393 XAGE1AQ9HD64 81 aa6.32□□□□□ -1.4
PTCD2P1-201ENST00000554393 C22orf24Q9Y442 160 aa6.32□□□□□ -1.4
PTCD2P1-201ENST00000554393 NUPR1O60356 82 aa6.31□□□□□ -1.4
PTCD2P1-201ENST00000554393 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
PTCD2P1-201ENST00000554393 ZNF22P17026 224 aaPredicted RBP6.3□□□□□ -1.4
PTCD2P1-201ENST00000554393 MRPL55Q7Z7F7 128 aaKnown RBP6.3□□□□□ -1.4
PTCD2P1-201ENST00000554393 IGLV5-37A0A075B6J1 123 aa6.29□□□□□ -1.4
PTCD2P1-201ENST00000554393 NDUFA6P56556 154 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms