RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 HERVK_113P61574 105 aa4.44□□□□□ -1.7
KTN1-213ENST00000554306 COX6A2Q02221 97 aa4.44□□□□□ -1.7
KTN1-213ENST00000554306 LINC01545Q5VT33 79 aa4.44□□□□□ -1.7
KTN1-213ENST00000554306 C5orf38Q86SI9 138 aa4.44□□□□□ -1.7
KTN1-213ENST00000554306 LINC00469Q8N7U9 141 aa4.44□□□□□ -1.7
KTN1-213ENST00000554306 DYNC2H1Q8NCM8 4307 aaKnown RBP4.43□□□□□ -1.7
KTN1-213ENST00000554306 IGLV4-69A0A075B6H9 119 aa4.43□□□□□ -1.7
KTN1-213ENST00000554306 IGHV3OR16-9A0A0B4J2B5 98 aa4.43□□□□□ -1.7
KTN1-213ENST00000554306 C11orf86A6NJI1 115 aa4.43□□□□□ -1.7
KTN1-213ENST00000554306 LINC01561Q8N1V8 128 aa4.43□□□□□ -1.7
KTN1-213ENST00000554306 PMCHL2Q9BQD1 86 aa4.43□□□□□ -1.7
KTN1-213ENST00000554306 CDKN2A-AS1Q9UH64 79 aa4.43□□□□□ -1.7
KTN1-213ENST00000554306 CSMD3Q7Z407 3707 aa4.43□□□□□ -1.7
KTN1-213ENST00000554306 IGLV5-45A0A087WSX0 123 aa4.42□□□□□ -1.7
KTN1-213ENST00000554306 A0A087WZ39 114 aa4.42□□□□□ -1.7
KTN1-213ENST00000554306 IGHV1-58A0A0C4DH39 117 aa4.42□□□□□ -1.7
KTN1-213ENST00000554306 HSBP1L1C9JCN9 74 aa4.42□□□□□ -1.7
KTN1-213ENST00000554306 ZNF22P17026 224 aaPredicted RBP4.42□□□□□ -1.7
KTN1-213ENST00000554306 JOSD1Q15040 202 aaPredicted RBP4.42□□□□□ -1.7
KTN1-213ENST00000554306 KRTAP26-1Q6PEX3 210 aa4.42□□□□□ -1.7
KTN1-213ENST00000554306 DNAH7Q8WXX0 4024 aa4.42□□□□□ -1.7
KTN1-213ENST00000554306 SPINK8P0C7L1 97 aa4.41□□□□□ -1.7
KTN1-213ENST00000554306 C14orf177Q52M58 125 aa4.41□□□□□ -1.7
KTN1-213ENST00000554306 ATOH7Q8N100 152 aa4.41□□□□□ -1.7
KTN1-213ENST00000554306 ORAOV1Q8WV07 137 aa4.41□□□□□ -1.7
KTN1-213ENST00000554306 STARD9Q9P2P6 4700 aa4.4□□□□□ -1.7
KTN1-213ENST00000554306 IGHV3-64A0A075B6Q5 118 aa4.4□□□□□ -1.71
KTN1-213ENST00000554306 hDV102S1A0JD36 115 aa4.4□□□□□ -1.71
KTN1-213ENST00000554306 TMEM223A0PJW6 202 aa4.4□□□□□ -1.71
KTN1-213ENST00000554306 USP17L23D6RBM5 183 aa4.4□□□□□ -1.71
KTN1-213ENST00000554306 C6orf226Q5I0X4 101 aa4.4□□□□□ -1.71
KTN1-213ENST00000554306 Q6ZRN7 208 aaPredicted RBP4.4□□□□□ -1.71
KTN1-213ENST00000554306 MAPKAPK5-AS1Q8N8E1 139 aa4.4□□□□□ -1.71
KTN1-213ENST00000554306 PLEKHB2Q96CS7 222 aa4.4□□□□□ -1.71
KTN1-213ENST00000554306 TOMM7Q9P0U1 55 aa4.4□□□□□ -1.71
KTN1-213ENST00000554306 PLECQ15149 4684 aaKnown RBP4.4□□□□□ -1.71
KTN1-213ENST00000554306 LOC105371267A0A1B0GV96 52 aa4.39□□□□□ -1.71
KTN1-213ENST00000554306 SMIM1B2RUZ4 78 aa4.39□□□□□ -1.71
KTN1-213ENST00000554306 LECT2O14960 151 aa4.39□□□□□ -1.71
KTN1-213ENST00000554306 LEPROTO15243 131 aa4.39□□□□□ -1.71
KTN1-213ENST00000554306 LGALS3P17931 250 aaKnown RBP4.39□□□□□ -1.71
KTN1-213ENST00000554306 CKS1BP61024 79 aa4.39□□□□□ -1.71
KTN1-213ENST00000554306 SPAG11BQ08648 103 aa4.39□□□□□ -1.71
KTN1-213ENST00000554306 HIGD2BQ4VC39 106 aa4.39□□□□□ -1.71
KTN1-213ENST00000554306 STPG4Q8N801 248 aa4.39□□□□□ -1.71
KTN1-213ENST00000554306 COX7B2Q8TF08 81 aa4.39□□□□□ -1.71
KTN1-213ENST00000554306 VAMP8Q9BV40 100 aa4.39□□□□□ -1.71
KTN1-213ENST00000554306 A0A087WTM6 91 aa4.38□□□□□ -1.71
KTN1-213ENST00000554306 GVQW2A0A096LPI5 108 aaPredicted RBP4.38□□□□□ -1.71
KTN1-213ENST00000554306 IGLV5-52A0A0A0MRZ9 124 aa4.38□□□□□ -1.71
KTN1-213ENST00000554306 E9PLD3 99 aa4.38□□□□□ -1.71
KTN1-213ENST00000554306 F8WDY8 70 aa4.38□□□□□ -1.71
KTN1-213ENST00000554306 S100A12P80511 92 aa4.38□□□□□ -1.71
KTN1-213ENST00000554306 PYY3Q5JQD4 70 aa4.38□□□□□ -1.71
KTN1-213ENST00000554306 LINC00336Q6ZUF6 198 aa4.38□□□□□ -1.71
KTN1-213ENST00000554306 Q8IZM0 81 aa4.38□□□□□ -1.71
KTN1-213ENST00000554306 C15orf56Q8N910 161 aa4.38□□□□□ -1.71
KTN1-213ENST00000554306 VPS13DQ5THJ4 4388 aa4.37□□□□□ -1.71
KTN1-213ENST00000554306 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.37□□□□□ -1.71
KTN1-213ENST00000554306 LRCOL1A6NCL2 159 aa4.37□□□□□ -1.71
KTN1-213ENST00000554306 J3QQQ9 107 aa4.37□□□□□ -1.71
KTN1-213ENST00000554306 NDUFA1O15239 70 aa4.37□□□□□ -1.71
KTN1-213ENST00000554306 RTL8CO15255 209 aa4.37□□□□□ -1.71
KTN1-213ENST00000554306 CXCL5P42830 114 aa4.37□□□□□ -1.71
KTN1-213ENST00000554306 NMUP48645 174 aa4.37□□□□□ -1.71
KTN1-213ENST00000554306 SFTA2Q6UW10 78 aa4.37□□□□□ -1.71
KTN1-213ENST00000554306 C2orf48Q96LS8 159 aa4.37□□□□□ -1.71
KTN1-213ENST00000554306 CAMK2N2Q96S95 79 aa4.37□□□□□ -1.71
KTN1-213ENST00000554306 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.36□□□□□ -1.71
KTN1-213ENST00000554306 MYMXA0A1B0GTQ4 84 aa4.36□□□□□ -1.71
KTN1-213ENST00000554306 SMIM6P0DI80 62 aa4.36□□□□□ -1.71
KTN1-213ENST00000554306 SYCNQ0VAF6 134 aa4.36□□□□□ -1.71
KTN1-213ENST00000554306 KIAA0087Q14695 138 aa4.36□□□□□ -1.71
KTN1-213ENST00000554306 MAJINQ3KP22 176 aa4.36□□□□□ -1.71
KTN1-213ENST00000554306 SPATA45Q537H7 98 aa4.36□□□□□ -1.71
KTN1-213ENST00000554306 Q8N814 137 aa4.36□□□□□ -1.71
KTN1-213ENST00000554306 LINC00526Q96FQ7 95 aa4.36□□□□□ -1.71
KTN1-213ENST00000554306 NDUFA12Q9UI09 145 aa4.36□□□□□ -1.71
KTN1-213ENST00000554306 PAM16Q9Y3D7 125 aa4.36□□□□□ -1.71
KTN1-213ENST00000554306 ALMS1Q8TCU4 4167 aa4.36□□□□□ -1.71
KTN1-213ENST00000554306 LINC00587B1AMM8 73 aa4.35□□□□□ -1.71
KTN1-213ENST00000554306 HERV-K104P63124 156 aa4.35□□□□□ -1.71
KTN1-213ENST00000554306 WFDC2Q14508 124 aa4.35□□□□□ -1.71
KTN1-213ENST00000554306 C2orf82Q6UX34 121 aa4.35□□□□□ -1.71
KTN1-213ENST00000554306 CARD19Q96LW7 228 aa4.35□□□□□ -1.71
KTN1-213ENST00000554306 PKIGQ9Y2B9 76 aa4.35□□□□□ -1.71
KTN1-213ENST00000554306 IGLV5-37A0A075B6J1 123 aa4.34□□□□□ -1.71
KTN1-213ENST00000554306 IGKV2D-26A0A0A0MRZ7 120 aa4.34□□□□□ -1.71
KTN1-213ENST00000554306 TRBV30A0A0K0K1B3 111 aa4.34□□□□□ -1.71
KTN1-213ENST00000554306 ZNF815PA8K554 130 aa4.34□□□□□ -1.71
KTN1-213ENST00000554306 CIRBPQ14011 172 aaKnown RBP4.34□□□□□ -1.71
KTN1-213ENST00000554306 MEIG1Q5JSS6 88 aa4.34□□□□□ -1.71
KTN1-213ENST00000554306 UNQ6190/PRO20217Q6UXQ8 127 aa4.34□□□□□ -1.71
KTN1-213ENST00000554306 SCGB1D4Q6XE38 83 aa4.34□□□□□ -1.71
KTN1-213ENST00000554306 DNAH1Q9P2D7 4330 aa4.34□□□□□ -1.71
KTN1-213ENST00000554306 COX8AP10176 69 aa4.33□□□□□ -1.72
KTN1-213ENST00000554306 TSPEAR-AS2P59090 65 aa4.33□□□□□ -1.72
KTN1-213ENST00000554306 CNBPP62633 177 aaKnown RBP4.33□□□□□ -1.72
KTN1-213ENST00000554306 Q6ZRU5 148 aa4.33□□□□□ -1.72
KTN1-213ENST00000554306 ZNF625Q96I27 306 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms