RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 Q5BKY6 102 aa3.8□□□□□ -1.8
ATXN3-224ENST00000554040 C2orf82Q6UX34 121 aa3.8□□□□□ -1.8
ATXN3-224ENST00000554040 KCNRGQ8N5I3 272 aa3.8□□□□□ -1.8
ATXN3-224ENST00000554040 C11orf52Q96A22 123 aa3.8□□□□□ -1.8
ATXN3-224ENST00000554040 SMIM12Q96EX1 92 aa3.8□□□□□ -1.8
ATXN3-224ENST00000554040 TIMM21Q9BVV7 248 aa3.8□□□□□ -1.8
ATXN3-224ENST00000554040 BIN3Q9NQY0 253 aa3.8□□□□□ -1.8
ATXN3-224ENST00000554040 RAB19A4D1S5 217 aa3.79□□□□□ -1.8
ATXN3-224ENST00000554040 M0R2T5 61 aa3.79□□□□□ -1.8
ATXN3-224ENST00000554040 FCER1GP30273 86 aa3.79□□□□□ -1.8
ATXN3-224ENST00000554040 UBE2AP49459 152 aa3.79□□□□□ -1.8
ATXN3-224ENST00000554040 GNG4P50150 75 aa3.79□□□□□ -1.8
ATXN3-224ENST00000554040 CCL20P78556 96 aa3.79□□□□□ -1.8
ATXN3-224ENST00000554040 SMIM29Q86T20 159 aa3.79□□□□□ -1.8
ATXN3-224ENST00000554040 C3orf22Q8N5N4 141 aa3.79□□□□□ -1.8
ATXN3-224ENST00000554040 LINC00469Q8N7U9 141 aa3.79□□□□□ -1.8
ATXN3-224ENST00000554040 FAM104AQ969W3 186 aa3.79□□□□□ -1.8
ATXN3-224ENST00000554040 LINC00167Q96N53 147 aa3.79□□□□□ -1.8
ATXN3-224ENST00000554040 IGLV5-37A0A075B6J1 123 aa3.78□□□□□ -1.8
ATXN3-224ENST00000554040 RPL37AP8A6NKH3 93 aa3.78□□□□□ -1.8
ATXN3-224ENST00000554040 VPREB1P12018 145 aa3.78□□□□□ -1.8
ATXN3-224ENST00000554040 IFITM3Q01628 133 aa3.78□□□□□ -1.8
ATXN3-224ENST00000554040 DAND5Q8N907 189 aa3.78□□□□□ -1.8
ATXN3-224ENST00000554040 XAGE1AQ9HD64 81 aa3.78□□□□□ -1.8
ATXN3-224ENST00000554040 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
ATXN3-224ENST00000554040 FAM213BQ8TBF2 198 aa3.77□□□□□ -1.81
ATXN3-224ENST00000554040 KIR2DL4Q99706 377 aa3.77□□□□□ -1.81
ATXN3-224ENST00000554040 TRBV20OR9-2A0A075B6H5 130 aa3.76□□□□□ -1.81
ATXN3-224ENST00000554040 FXYD6-FXYD2A0A087WZ82 144 aa3.76□□□□□ -1.81
ATXN3-224ENST00000554040 TGIF2-C20orf24A0A0A6YYL0 155 aa3.76□□□□□ -1.81
ATXN3-224ENST00000554040 RAB4AP20338 218 aa3.76□□□□□ -1.81
ATXN3-224ENST00000554040 RPL32P62910 135 aaKnown RBP3.76□□□□□ -1.81
ATXN3-224ENST00000554040 S100ZQ8WXG8 99 aa3.76□□□□□ -1.81
ATXN3-224ENST00000554040 PLEKHB2Q96CS7 222 aa3.76□□□□□ -1.81
ATXN3-224ENST00000554040 UMAD1C9J7I0 102 aa3.75□□□□□ -1.81
ATXN3-224ENST00000554040 PPP1R17O96001 155 aa3.75□□□□□ -1.81
ATXN3-224ENST00000554040 RPL39P62891 51 aaKnown RBP3.75□□□□□ -1.81
ATXN3-224ENST00000554040 HBBP68871 147 aa3.75□□□□□ -1.81
ATXN3-224ENST00000554040 MRPS36P82909 103 aaKnown RBP3.75□□□□□ -1.81
ATXN3-224ENST00000554040 PAPPA-AS1Q5QFB9 102 aa3.75□□□□□ -1.81
ATXN3-224ENST00000554040 GAGE2AQ6NT46 116 aa3.75□□□□□ -1.81
ATXN3-224ENST00000554040 LINC00299Q6ZSB3 139 aa3.75□□□□□ -1.81
ATXN3-224ENST00000554040 LINC01561Q8N1V8 128 aa3.75□□□□□ -1.81
ATXN3-224ENST00000554040 TMEM191AQ9H0A3 160 aa3.75□□□□□ -1.81
ATXN3-224ENST00000554040 GNG13Q9P2W3 67 aa3.75□□□□□ -1.81
ATXN3-224ENST00000554040 IGLV8-61A0A075B6I0 122 aa3.74□□□□□ -1.81
ATXN3-224ENST00000554040 SMKR1H3BMG3 65 aa3.74□□□□□ -1.81
ATXN3-224ENST00000554040 SPINK1P00995 79 aa3.74□□□□□ -1.81
ATXN3-224ENST00000554040 GIPP09681 153 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-224ENST00000554040 CKS1BP61024 79 aa3.74□□□□□ -1.81
ATXN3-224ENST00000554040 PNRC1Q12796 327 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-224ENST00000554040 AMN1Q8IY45 258 aa3.74□□□□□ -1.81
ATXN3-224ENST00000554040 MANBALQ9NQG1 85 aa3.74□□□□□ -1.81
ATXN3-224ENST00000554040 SPANXA1Q9NS26 97 aa3.74□□□□□ -1.81
ATXN3-224ENST00000554040 MED9Q9NWA0 146 aa3.74□□□□□ -1.81
ATXN3-224ENST00000554040 NDUFA12Q9UI09 145 aa3.74□□□□□ -1.81
ATXN3-224ENST00000554040 PAM16Q9Y3D7 125 aa3.74□□□□□ -1.81
ATXN3-224ENST00000554040 K7EN84 100 aa3.73□□□□□ -1.81
ATXN3-224ENST00000554040 PPP1R2P9O14990 202 aa3.73□□□□□ -1.81
ATXN3-224ENST00000554040 PDE6DO43924 150 aa3.73□□□□□ -1.81
ATXN3-224ENST00000554040 PRLHP81277 87 aa3.73□□□□□ -1.81
ATXN3-224ENST00000554040 PCOTHQ58A44 107 aa3.73□□□□□ -1.81
ATXN3-224ENST00000554040 C6orf226Q5I0X4 101 aa3.73□□□□□ -1.81
ATXN3-224ENST00000554040 Q8NBF4 154 aa3.73□□□□□ -1.81
ATXN3-224ENST00000554040 A8MWL6 223 aa3.72□□□□□ -1.81
ATXN3-224ENST00000554040 GATCO43716 136 aaKnown RBP3.72□□□□□ -1.81
ATXN3-224ENST00000554040 Q6ZN92 141 aa3.72□□□□□ -1.81
ATXN3-224ENST00000554040 FAM19A1Q7Z5A9 133 aa3.72□□□□□ -1.81
ATXN3-224ENST00000554040 BORCS7Q96B45 105 aa3.72□□□□□ -1.81
ATXN3-224ENST00000554040 GNB1LQ9BYB4 327 aa3.72□□□□□ -1.81
ATXN3-224ENST00000554040 TOMM7Q9P0U1 55 aa3.72□□□□□ -1.81
ATXN3-224ENST00000554040 IGKV2-28A0A075B6P5 120 aa3.71□□□□□ -1.82
ATXN3-224ENST00000554040 A0A1B0GUT8 65 aa3.71□□□□□ -1.82
ATXN3-224ENST00000554040 KRTAP4-16G5E9R7 235 aaPredicted RBP3.71□□□□□ -1.82
ATXN3-224ENST00000554040 TCAPO15273 167 aa3.71□□□□□ -1.82
ATXN3-224ENST00000554040 IGKV2D-28P01615 120 aa3.71□□□□□ -1.82
ATXN3-224ENST00000554040 CBLN2Q8IUK8 224 aa3.71□□□□□ -1.82
ATXN3-224ENST00000554040 Q8IZM0 81 aa3.71□□□□□ -1.82
ATXN3-224ENST00000554040 FAM19A2Q8N3H0 131 aa3.71□□□□□ -1.82
ATXN3-224ENST00000554040 C20orf78Q9BR46 151 aa3.71□□□□□ -1.82
ATXN3-224ENST00000554040 F8VRH5 84 aa3.7□□□□□ -1.82
ATXN3-224ENST00000554040 ARPC5O15511 151 aa3.7□□□□□ -1.82
ATXN3-224ENST00000554040 UBE2V1Q13404 147 aa3.7□□□□□ -1.82
ATXN3-224ENST00000554040 FAM231DQ6ZW35 169 aa3.7□□□□□ -1.82
ATXN3-224ENST00000554040 Q75L30 129 aa3.7□□□□□ -1.82
ATXN3-224ENST00000554040 Q8N377 158 aa3.7□□□□□ -1.82
ATXN3-224ENST00000554040 NKAPP1Q8N9T2 125 aa3.7□□□□□ -1.82
ATXN3-224ENST00000554040 SPRR4Q96PI1 79 aa3.7□□□□□ -1.82
ATXN3-224ENST00000554040 ALKBH7Q9BT30 221 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-224ENST00000554040 NDUFA13Q9P0J0 144 aa3.7□□□□□ -1.82
ATXN3-224ENST00000554040 TRBV24-1A0A075B6N3 115 aa3.69□□□□□ -1.82
ATXN3-224ENST00000554040 HIGD1CA8MV81 97 aa3.69□□□□□ -1.82
ATXN3-224ENST00000554040 TMEM238C9JI98 176 aa3.69□□□□□ -1.82
ATXN3-224ENST00000554040 SLC25A20O43772 301 aa3.69□□□□□ -1.82
ATXN3-224ENST00000554040 SCO1O75880 301 aa3.69□□□□□ -1.82
ATXN3-224ENST00000554040 CFC1P0CG37 223 aa3.69□□□□□ -1.82
ATXN3-224ENST00000554040 RPS29P62273 56 aaKnown RBP3.69□□□□□ -1.82
ATXN3-224ENST00000554040 SNRPEP62304 92 aaKnown RBP3.69□□□□□ -1.82
ATXN3-224ENST00000554040 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
ATXN3-224ENST00000554040 COX6B2Q6YFQ2 88 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms