RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 IGHV3-30-3P0DP02 117 aa5.92□□□□□ -1.46
TDP1-208ENST00000553989 IGHV3-30-5P0DP03 117 aa5.92□□□□□ -1.46
TDP1-208ENST00000553989 SCGB1A1P11684 91 aa5.92□□□□□ -1.46
TDP1-208ENST00000553989 UBE2D1P51668 147 aa5.92□□□□□ -1.46
TDP1-208ENST00000553989 LINC01556Q5JQF7 62 aa5.92□□□□□ -1.46
TDP1-208ENST00000553989 TMEM170BQ5T4T1 132 aa5.92□□□□□ -1.46
TDP1-208ENST00000553989 Q8N814 137 aa5.92□□□□□ -1.46
TDP1-208ENST00000553989 NAA38Q9BRA0 125 aaKnown RBP5.92□□□□□ -1.46
TDP1-208ENST00000553989 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.91□□□□□ -1.46
TDP1-208ENST00000553989 LRCOL1A6NCL2 159 aa5.91□□□□□ -1.46
TDP1-208ENST00000553989 K7ERJ3 54 aa5.91□□□□□ -1.46
TDP1-208ENST00000553989 SMAGPQ0VAQ4 97 aa5.91□□□□□ -1.46
TDP1-208ENST00000553989 ATP6V0E2Q8NHE4 81 aa5.91□□□□□ -1.46
TDP1-208ENST00000553989 SIGMAR1Q99720 223 aa5.91□□□□□ -1.46
TDP1-208ENST00000553989 JPT2Q9H910 190 aa5.91□□□□□ -1.46
TDP1-208ENST00000553989 IGHV3-73A0A0B4J1V6 119 aa5.9□□□□□ -1.46
TDP1-208ENST00000553989 TMEM223A0PJW6 202 aa5.9□□□□□ -1.46
TDP1-208ENST00000553989 IBA57-AS1B1ANH7 110 aa5.9□□□□□ -1.46
TDP1-208ENST00000553989 B5MCH6 92 aa5.9□□□□□ -1.46
TDP1-208ENST00000553989 TIRAPP58753 221 aa5.9□□□□□ -1.46
TDP1-208ENST00000553989 FAM74A4Q5TZK3 123 aa5.9□□□□□ -1.46
TDP1-208ENST00000553989 SPANXA1Q9NS26 97 aa5.9□□□□□ -1.46
TDP1-208ENST00000553989 FAM30AQ9NZY2 134 aa5.9□□□□□ -1.46
TDP1-208ENST00000553989 PRO1854Q9UHT4 67 aa5.9□□□□□ -1.46
TDP1-208ENST00000553989 TMEM238C9JI98 176 aa5.89□□□□□ -1.47
TDP1-208ENST00000553989 H3BMG7 143 aa5.89□□□□□ -1.47
TDP1-208ENST00000553989 M0QXV9 152 aa5.89□□□□□ -1.47
TDP1-208ENST00000553989 RPL39P62891 51 aaKnown RBP5.89□□□□□ -1.47
TDP1-208ENST00000553989 WFDC2Q14508 124 aa5.89□□□□□ -1.47
TDP1-208ENST00000553989 LELP1Q5T871 98 aa5.89□□□□□ -1.47
TDP1-208ENST00000553989 AMELXQ99217 191 aa5.89□□□□□ -1.47
TDP1-208ENST00000553989 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.89□□□□□ -1.47
TDP1-208ENST00000553989 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.88□□□□□ -1.47
TDP1-208ENST00000553989 LECT2O14960 151 aa5.88□□□□□ -1.47
TDP1-208ENST00000553989 SCGB1C2P0DMR2 95 aa5.88□□□□□ -1.47
TDP1-208ENST00000553989 UBE2D3P61077 147 aa5.88□□□□□ -1.47
TDP1-208ENST00000553989 UBE2D2P62837 147 aa5.88□□□□□ -1.47
TDP1-208ENST00000553989 TIMM21Q9BVV7 248 aa5.88□□□□□ -1.47
TDP1-208ENST00000553989 GTSF1LQ9H1H1 148 aa5.88□□□□□ -1.47
TDP1-208ENST00000553989 PRO0461Q9UI25 63 aa5.88□□□□□ -1.47
TDP1-208ENST00000553989 FAT1Q14517 4588 aa5.88□□□□□ -1.47
TDP1-208ENST00000553989 IGLV4-3A0A075B6K6 122 aa5.87□□□□□ -1.47
TDP1-208ENST00000553989 LOC107984156A0A0G2JMH3 177 aa5.87□□□□□ -1.47
TDP1-208ENST00000553989 TINCRA0A1B0GVN0 87 aa5.87□□□□□ -1.47
TDP1-208ENST00000553989 TRBV6-4A0A1B0GX49 114 aa5.87□□□□□ -1.47
TDP1-208ENST00000553989 RS1O15537 224 aa5.87□□□□□ -1.47
TDP1-208ENST00000553989 CIDEAO60543 219 aa5.87□□□□□ -1.47
TDP1-208ENST00000553989 PSMB2P49721 201 aa5.87□□□□□ -1.47
TDP1-208ENST00000553989 MRPS36P82909 103 aaKnown RBP5.87□□□□□ -1.47
TDP1-208ENST00000553989 CFAP126Q5VTH2 177 aa5.87□□□□□ -1.47
TDP1-208ENST00000553989 ARL17AQ8IVW1 177 aa5.87□□□□□ -1.47
TDP1-208ENST00000553989 ERG28Q9UKR5 140 aa5.87□□□□□ -1.47
TDP1-208ENST00000553989 MYCBP2O75592 4640 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 TRAV8-3A0A0A6YYJ7 113 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 A0A0B4J2C4 111 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 A0A0J9YXY3 114 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 GAGE12HA6NDE8 117 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 GAGE12JA6NER3 117 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 APOMO95445 188 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 TSPAN13O95857 204 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 CFC1BP0CG36 223 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 CFC1P0CG37 223 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 IFITM1P13164 125 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 ZNF22P17026 224 aaPredicted RBP5.86□□□□□ -1.47
TDP1-208ENST00000553989 GAGE4Q13068 117 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 GAGE5Q13069 117 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 DEFB104AQ8WTQ1 72 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 COPS9Q8WXC6 57 aa5.86□□□□□ -1.47
TDP1-208ENST00000553989 IGHV1-58A0A0C4DH39 117 aa5.85□□□□□ -1.47
TDP1-208ENST00000553989 A0A0J9YXV3 536 aa5.85□□□□□ -1.47
TDP1-208ENST00000553989 TMEM262E9PQX1 116 aa5.85□□□□□ -1.47
TDP1-208ENST00000553989 TIMM17BO60830 172 aa5.85□□□□□ -1.47
TDP1-208ENST00000553989 FOXI1Q12951 378 aa5.85□□□□□ -1.47
TDP1-208ENST00000553989 CIRBPQ14011 172 aaKnown RBP5.85□□□□□ -1.47
TDP1-208ENST00000553989 ETDBQ3ZM63 59 aa5.85□□□□□ -1.47
TDP1-208ENST00000553989 MTURNQ8N3F0 131 aa5.85□□□□□ -1.47
TDP1-208ENST00000553989 Q8N3U1 123 aa5.85□□□□□ -1.47
TDP1-208ENST00000553989 PPDPFLQ8WWR9 84 aa5.85□□□□□ -1.47
TDP1-208ENST00000553989 LINC01600Q96MT4 127 aa5.85□□□□□ -1.47
TDP1-208ENST00000553989 TRBV10-1A0A0K0K1A3 114 aa5.84□□□□□ -1.47
TDP1-208ENST00000553989 COX6CP09669 75 aa5.84□□□□□ -1.47
TDP1-208ENST00000553989 LINC01620Q4KN68 170 aa5.84□□□□□ -1.47
TDP1-208ENST00000553989 DGAT2L7PQ6IED9 249 aa5.84□□□□□ -1.47
TDP1-208ENST00000553989 DAZ4Q86SG3 579 aaKnown RBP5.84□□□□□ -1.47
TDP1-208ENST00000553989 MUSTN1Q8IVN3 82 aa5.84□□□□□ -1.47
TDP1-208ENST00000553989 RMI2Q96E14 147 aa5.84□□□□□ -1.47
TDP1-208ENST00000553989 DAZ3Q9NR90 486 aaKnown RBP5.84□□□□□ -1.47
TDP1-208ENST00000553989 SRRM2Q9UQ35 2752 aaKnown RBP5.84□□□□□ -1.47
TDP1-208ENST00000553989 VPS13BQ7Z7G8 4022 aa5.83□□□□□ -1.48
TDP1-208ENST00000553989 IGKV2D-24A0A075B6R9 120 aa5.83□□□□□ -1.48
TDP1-208ENST00000553989 TRBV30A0A0K0K1B3 111 aa5.83□□□□□ -1.48
TDP1-208ENST00000553989 A4D1N5 150 aa5.83□□□□□ -1.48
TDP1-208ENST00000553989 KRTAP29-1A8MX34 341 aaPredicted RBP5.83□□□□□ -1.48
TDP1-208ENST00000553989 Q6ZSA8 131 aa5.83□□□□□ -1.48
TDP1-208ENST00000553989 SCXQ7RTU7 201 aa5.83□□□□□ -1.48
TDP1-208ENST00000553989 OPRPNQ99935 248 aaPredicted RBP5.83□□□□□ -1.48
TDP1-208ENST00000553989 SPANXDQ9BXN6 97 aa5.83□□□□□ -1.48
TDP1-208ENST00000553989 GEMIN7Q9H840 131 aaKnown RBP5.83□□□□□ -1.48
TDP1-208ENST00000553989 SPANXCQ9NY87 97 aa5.83□□□□□ -1.48
TDP1-208ENST00000553989 CSDC2Q9Y534 153 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms