RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 Q9H8V8 135 aa8.74□□□□□ -1.01
VIPAS39-206ENST00000553888 SPANXB1Q9NS25 103 aaPredicted RBP8.74□□□□□ -1.01
VIPAS39-206ENST00000553888 DNAH9Q9NYC9 4486 aa8.74□□□□□ -1.01
VIPAS39-206ENST00000553888 EIF4EBP3O60516 100 aaPredicted RBP8.74□□□□□ -1.01
VIPAS39-206ENST00000553888 ANGP03950 147 aaKnown RBP8.74□□□□□ -1.01
VIPAS39-206ENST00000553888 LINC01620Q4KN68 170 aa8.74□□□□□ -1.01
VIPAS39-206ENST00000553888 CARD19Q96LW7 228 aa8.74□□□□□ -1.01
VIPAS39-206ENST00000553888 A0A1B0GUV1 79 aa8.73□□□□□ -1.01
VIPAS39-206ENST00000553888 C1orf195Q5TG92 126 aa8.73□□□□□ -1.01
VIPAS39-206ENST00000553888 MUSTN1Q8IVN3 82 aa8.73□□□□□ -1.01
VIPAS39-206ENST00000553888 C11orf45Q8TAV5 145 aa8.73□□□□□ -1.01
VIPAS39-206ENST00000553888 TOMM7Q9P0U1 55 aa8.73□□□□□ -1.01
VIPAS39-206ENST00000553888 IGHV3OR16-9A0A0B4J2B5 98 aa8.73□□□□□ -1.01
VIPAS39-206ENST00000553888 LYPD5Q6UWN5 251 aa8.72□□□□□ -1.01
VIPAS39-206ENST00000553888 NDUFV3P56181 108 aaKnown RBP8.72□□□□□ -1.01
VIPAS39-206ENST00000553888 SFTA2Q6UW10 78 aa8.72□□□□□ -1.01
VIPAS39-206ENST00000553888 NDUFA1O15239 70 aa8.71□□□□□ -1.01
VIPAS39-206ENST00000553888 C2orf48Q96LS8 159 aa8.71□□□□□ -1.01
VIPAS39-206ENST00000553888 CDIP1Q9H305 208 aa8.71□□□□□ -1.01
VIPAS39-206ENST00000553888 PRSS2P07478 247 aa8.71□□□□□ -1.02
VIPAS39-206ENST00000553888 LELP1Q5T871 98 aa8.71□□□□□ -1.02
VIPAS39-206ENST00000553888 DEFB131BA0A096LNP1 70 aa8.7□□□□□ -1.02
VIPAS39-206ENST00000553888 DNHD1Q96M86 4753 aa8.7□□□□□ -1.02
VIPAS39-206ENST00000553888 IGLL5B9A064 214 aa8.7□□□□□ -1.02
VIPAS39-206ENST00000553888 IGHV3-33P01772 117 aa8.7□□□□□ -1.02
VIPAS39-206ENST00000553888 CFC1BP0CG36 223 aa8.7□□□□□ -1.02
VIPAS39-206ENST00000553888 CFC1P0CG37 223 aa8.7□□□□□ -1.02
VIPAS39-206ENST00000553888 FAM19A1Q7Z5A9 133 aa8.7□□□□□ -1.02
VIPAS39-206ENST00000553888 WFDC10BQ8IUB3 73 aa8.7□□□□□ -1.02
VIPAS39-206ENST00000553888 TM2D3Q9BRN9 247 aa8.7□□□□□ -1.02
VIPAS39-206ENST00000553888 SPCS1Q9Y6A9 102 aa8.7□□□□□ -1.02
VIPAS39-206ENST00000553888 A0A1B0GWB2 263 aa8.7□□□□□ -1.02
VIPAS39-206ENST00000553888 A0A1W2PPM0 123 aa8.7□□□□□ -1.02
VIPAS39-206ENST00000553888 REG3AQ06141 175 aa8.7□□□□□ -1.02
VIPAS39-206ENST00000553888 SH2D6Q7Z4S9 175 aa8.69□□□□□ -1.02
VIPAS39-206ENST00000553888 KLK12Q9UKR0 248 aa8.69□□□□□ -1.02
VIPAS39-206ENST00000553888 A0A087WZ39 114 aa8.68□□□□□ -1.02
VIPAS39-206ENST00000553888 SS18Q15532 418 aa8.68□□□□□ -1.02
VIPAS39-206ENST00000553888 COX7B2Q8TF08 81 aa8.68□□□□□ -1.02
VIPAS39-206ENST00000553888 LYSTQ99698 3801 aa8.68□□□□□ -1.02
VIPAS39-206ENST00000553888 ESRGQ1W209 222 aa8.67□□□□□ -1.02
VIPAS39-206ENST00000553888 ETDBQ3ZM63 59 aa8.67□□□□□ -1.02
VIPAS39-206ENST00000553888 CHCHD10Q8WYQ3 142 aaPredicted RBP8.67□□□□□ -1.02
VIPAS39-206ENST00000553888 STAB2Q8WWQ8 2551 aa8.67□□□□□ -1.02
VIPAS39-206ENST00000553888 MIAQ16674 131 aa8.67□□□□□ -1.02
VIPAS39-206ENST00000553888 FAM236AA0A1B0GUQ0 79 aa8.66□□□□□ -1.02
VIPAS39-206ENST00000553888 FAM236BA0A1B0GV22 79 aa8.66□□□□□ -1.02
VIPAS39-206ENST00000553888 H7C2G1 150 aa8.66□□□□□ -1.02
VIPAS39-206ENST00000553888 SPANXDQ9BXN6 97 aa8.66□□□□□ -1.02
VIPAS39-206ENST00000553888 SPANXCQ9NY87 97 aa8.66□□□□□ -1.02
VIPAS39-206ENST00000553888 H3BS24 57 aa8.65□□□□□ -1.02
VIPAS39-206ENST00000553888 WFDC2Q14508 124 aa8.65□□□□□ -1.02
VIPAS39-206ENST00000553888 TTC32Q5I0X7 151 aa8.65□□□□□ -1.03
VIPAS39-206ENST00000553888 ENHOQ6UWT2 76 aa8.65□□□□□ -1.03
VIPAS39-206ENST00000553888 C2orf82Q6UX34 121 aa8.65□□□□□ -1.03
VIPAS39-206ENST00000553888 SOSTDC1Q6X4U4 206 aa8.65□□□□□ -1.03
VIPAS39-206ENST00000553888 A0A0U1RQV1 116 aa8.64□□□□□ -1.03
VIPAS39-206ENST00000553888 FABP2P12104 132 aa8.64□□□□□ -1.03
VIPAS39-206ENST00000553888 H3BNG1 76 aa8.64□□□□□ -1.03
VIPAS39-206ENST00000553888 PRKDCP78527 4128 aaKnown RBP8.63□□□□□ -1.03
VIPAS39-206ENST00000553888 IFITM1P13164 125 aa8.63□□□□□ -1.03
VIPAS39-206ENST00000553888 UBE2WQ96B02 151 aa8.63□□□□□ -1.03
VIPAS39-206ENST00000553888 LINC00526Q96FQ7 95 aa8.63□□□□□ -1.03
VIPAS39-206ENST00000553888 CD164L2Q6UWJ8 174 aa8.63□□□□□ -1.03
VIPAS39-206ENST00000553888 TIMM17BO60830 172 aa8.62□□□□□ -1.03
VIPAS39-206ENST00000553888 FOXI1Q12951 378 aa8.62□□□□□ -1.03
VIPAS39-206ENST00000553888 LINC00308Q8TCZ7 52 aa8.62□□□□□ -1.03
VIPAS39-206ENST00000553888 PRO1854Q9UHT4 67 aa8.62□□□□□ -1.03
VIPAS39-206ENST00000553888 LOC107984156A0A0G2JMH3 177 aa8.61□□□□□ -1.03
VIPAS39-206ENST00000553888 A0A1B0GX51 115 aa8.61□□□□□ -1.03
VIPAS39-206ENST00000553888 COX7A2LO14548 114 aa8.61□□□□□ -1.03
VIPAS39-206ENST00000553888 PFN2P35080 140 aa8.61□□□□□ -1.03
VIPAS39-206ENST00000553888 CIRBPQ14011 172 aaKnown RBP8.61□□□□□ -1.03
VIPAS39-206ENST00000553888 ARL17AQ8IVW1 177 aa8.61□□□□□ -1.03
VIPAS39-206ENST00000553888 KLK5Q9Y337 293 aaPredicted RBP8.61□□□□□ -1.03
VIPAS39-206ENST00000553888 Q5XG85 94 aa8.61□□□□□ -1.03
VIPAS39-206ENST00000553888 PRR34Q9NV39 138 aa8.61□□□□□ -1.03
VIPAS39-206ENST00000553888 CSMD3Q7Z407 3707 aa8.6□□□□□ -1.03
VIPAS39-206ENST00000553888 TRAV10A0A0B4J240 114 aa8.6□□□□□ -1.03
VIPAS39-206ENST00000553888 MIR7-3HGQ8N6C7 128 aa8.6□□□□□ -1.03
VIPAS39-206ENST00000553888 H3BMG7 143 aa8.59□□□□□ -1.03
VIPAS39-206ENST00000553888 LINC00158P58513 81 aa8.59□□□□□ -1.03
VIPAS39-206ENST00000553888 GAGE2BQ13066 116 aa8.59□□□□□ -1.03
VIPAS39-206ENST00000553888 GAGE2EQ4V326 116 aa8.59□□□□□ -1.03
VIPAS39-206ENST00000553888 C6orf223Q8N319 242 aa8.59□□□□□ -1.03
VIPAS39-206ENST00000553888 GAGE2DQ9UEU5 116 aa8.59□□□□□ -1.03
VIPAS39-206ENST00000553888 A0A0B4J2C4 111 aa8.59□□□□□ -1.03
VIPAS39-206ENST00000553888 KIAA0087Q14695 138 aa8.59□□□□□ -1.03
VIPAS39-206ENST00000553888 C9orf116Q5BN46 136 aaPredicted RBP8.58□□□□□ -1.04
VIPAS39-206ENST00000553888 CRPP02741 224 aa8.58□□□□□ -1.04
VIPAS39-206ENST00000553888 DNAH1Q9P2D7 4330 aa8.57□□□□□ -1.04
VIPAS39-206ENST00000553888 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.57□□□□□ -1.04
VIPAS39-206ENST00000553888 Q1RN00 199 aa8.57□□□□□ -1.04
VIPAS39-206ENST00000553888 Q8IZM0 81 aa8.57□□□□□ -1.04
VIPAS39-206ENST00000553888 LINC01561Q8N1V8 128 aa8.57□□□□□ -1.04
VIPAS39-206ENST00000553888 LINC00588Q9Y4M8 146 aa8.57□□□□□ -1.04
VIPAS39-206ENST00000553888 RPS28P62857 69 aaKnown RBP8.56□□□□□ -1.04
VIPAS39-206ENST00000553888 DNAH7Q8WXX0 4024 aa8.56□□□□□ -1.04
VIPAS39-206ENST00000553888 PSMB2P49721 201 aa8.56□□□□□ -1.04
VIPAS39-206ENST00000553888 C10orf25Q5T742 122 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms